RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 STAB2Q8WWQ8 2551 aa9.97□□□□□ -0.81
CDK11B-204ENST00000407249 CHTF8P0CG12 524 aa9.97□□□□□ -0.81
CDK11B-204ENST00000407249 Q6ZRN7 208 aaPredicted RBP9.97□□□□□ -0.81
CDK11B-204ENST00000407249 COL7A1Q02388 2944 aa9.94□□□□□ -0.82
CDK11B-204ENST00000407249 LYSTQ99698 3801 aa9.94□□□□□ -0.82
CDK11B-204ENST00000407249 MMP24-AS1A0A0U1RRL7 71 aa9.93□□□□□ -0.82
CDK11B-204ENST00000407249 MIR22HGQ0VDD5 57 aa9.89□□□□□ -0.83
CDK11B-204ENST00000407249 SPATA8Q6RVD6 105 aa9.87□□□□□ -0.83
CDK11B-204ENST00000407249 CSMD3Q7Z407 3707 aa9.87□□□□□ -0.83
CDK11B-204ENST00000407249 KRTAP13-1Q8IUC0 172 aa9.85□□□□□ -0.83
CDK11B-204ENST00000407249 Q96NJ1 140 aa9.84□□□□□ -0.83
CDK11B-204ENST00000407249 A0A087WTM6 91 aa9.84□□□□□ -0.83
CDK11B-204ENST00000407249 DNAH7Q8WXX0 4024 aa9.83□□□□□ -0.84
CDK11B-204ENST00000407249 PLECQ15149 4684 aaKnown RBP9.83□□□□□ -0.84
CDK11B-204ENST00000407249 P0C880 135 aa9.82□□□□□ -0.84
CDK11B-204ENST00000407249 TP53AIP1Q9HCN2 124 aa9.81□□□□□ -0.84
CDK11B-204ENST00000407249 VPS13DQ5THJ4 4388 aa9.81□□□□□ -0.84
CDK11B-204ENST00000407249 PANO1I0J062 215 aa9.8□□□□□ -0.84
CDK11B-204ENST00000407249 PCOTHQ58A44 107 aa9.8□□□□□ -0.84
CDK11B-204ENST00000407249 TENM2Q9NT68 2774 aa9.8□□□□□ -0.84
CDK11B-204ENST00000407249 SPACA4Q8TDM5 124 aa9.79□□□□□ -0.84
CDK11B-204ENST00000407249 IGLV9-49A0A0B4J1Y8 123 aa9.79□□□□□ -0.84
CDK11B-204ENST00000407249 HRES1P13985 223 aa9.78□□□□□ -0.84
CDK11B-204ENST00000407249 C8orf17Q9NRJ1 99 aa9.78□□□□□ -0.84
CDK11B-204ENST00000407249 PRKDCP78527 4128 aaKnown RBP9.75□□□□□ -0.85
CDK11B-204ENST00000407249 STARD9Q9P2P6 4700 aa9.74□□□□□ -0.85
CDK11B-204ENST00000407249 KRTAP16-1A8MUX0 517 aa9.74□□□□□ -0.85
CDK11B-204ENST00000407249 KRTAP25-1Q3LHN0 102 aa9.73□□□□□ -0.85
CDK11B-204ENST00000407249 LINC00483Q53H64 154 aa9.72□□□□□ -0.85
CDK11B-204ENST00000407249 ZNF861PO60384 105 aa9.72□□□□□ -0.85
CDK11B-204ENST00000407249 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.72□□□□□ -0.85
CDK11B-204ENST00000407249 A0A1B0GVX0 72 aa9.71□□□□□ -0.85
CDK11B-204ENST00000407249 WWC2-AS2Q96NR7 200 aa9.7□□□□□ -0.86
CDK11B-204ENST00000407249 MEGF8Q7Z7M0 2845 aa9.7□□□□□ -0.86
CDK11B-204ENST00000407249 LY6G6CO95867 125 aa9.68□□□□□ -0.86
CDK11B-204ENST00000407249 IGLV5-52A0A0A0MRZ9 124 aa9.68□□□□□ -0.86
CDK11B-204ENST00000407249 MRPL34Q9BQ48 92 aaKnown RBP9.67□□□□□ -0.86
CDK11B-204ENST00000407249 CDK2AP2O75956 126 aa9.65□□□□□ -0.86
CDK11B-204ENST00000407249 DNAH6Q9C0G6 4158 aa9.64□□□□□ -0.87
CDK11B-204ENST00000407249 UQCR11O14957 56 aa9.61□□□□□ -0.87
CDK11B-204ENST00000407249 ANAPC11Q9NYG5 84 aa9.6□□□□□ -0.87
CDK11B-204ENST00000407249 PSORS1C2Q9UIG4 136 aa9.59□□□□□ -0.87
CDK11B-204ENST00000407249 DNAH17Q9UFH2 4485 aa9.58□□□□□ -0.88
CDK11B-204ENST00000407249 A0A1B0GU69 56 aa9.58□□□□□ -0.88
CDK11B-204ENST00000407249 FRAS1Q86XX4 4008 aa9.57□□□□□ -0.88
CDK11B-204ENST00000407249 ALMS1Q8TCU4 4167 aa9.56□□□□□ -0.88
CDK11B-204ENST00000407249 Q5W150 140 aa9.55□□□□□ -0.88
CDK11B-204ENST00000407249 KRTAP13-3Q3SY46 172 aa9.54□□□□□ -0.88
CDK11B-204ENST00000407249 DNAH2Q9P225 4427 aa9.53□□□□□ -0.88
CDK11B-204ENST00000407249 DNAH8Q96JB1 4490 aa9.53□□□□□ -0.88
CDK11B-204ENST00000407249 A8MUU9 505 aa9.52□□□□□ -0.88
CDK11B-204ENST00000407249 SPINK6Q6UWN8 80 aa9.5□□□□□ -0.89
CDK11B-204ENST00000407249 HECTD4Q9Y4D8 3996 aa9.5□□□□□ -0.89
CDK11B-204ENST00000407249 C20orf166-AS1Q96NR2 134 aa9.49□□□□□ -0.89
CDK11B-204ENST00000407249 KMT2AQ03164 3969 aa9.47□□□□□ -0.89
CDK11B-204ENST00000407249 IGLV7-43P04211 117 aa9.47□□□□□ -0.89
CDK11B-204ENST00000407249 KRTAP10-2P60368 255 aa9.46□□□□□ -0.89
CDK11B-204ENST00000407249 NDUFAF8A1L188 74 aa9.46□□□□□ -0.9
CDK11B-204ENST00000407249 ACYP2P14621 99 aa9.44□□□□□ -0.9
CDK11B-204ENST00000407249 Q6ZSA8 131 aa9.44□□□□□ -0.9
CDK11B-204ENST00000407249 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
CDK11B-204ENST00000407249 DMAC1Q96GE9 116 aa9.39□□□□□ -0.91
CDK11B-204ENST00000407249 SEC61BP60468 96 aaKnown RBP9.38□□□□□ -0.91
CDK11B-204ENST00000407249 KRTAP10-1P60331 282 aa9.37□□□□□ -0.91
CDK11B-204ENST00000407249 SSBP3-AS1Q7Z2R9 100 aa9.35□□□□□ -0.91
CDK11B-204ENST00000407249 LUZP6Q538Z0 58 aa9.34□□□□□ -0.91
CDK11B-204ENST00000407249 FAM229AH3BQW9 127 aa9.33□□□□□ -0.92
CDK11B-204ENST00000407249 DNAH11Q96DT5 4516 aa9.32□□□□□ -0.92
CDK11B-204ENST00000407249 TGP01266 2768 aa9.31□□□□□ -0.92
CDK11B-204ENST00000407249 DNAH5Q8TE73 4624 aa9.3□□□□□ -0.92
CDK11B-204ENST00000407249 LINC00304Q8N9R0 145 aa9.29□□□□□ -0.92
CDK11B-204ENST00000407249 IGKV2-30P06310 120 aa9.28□□□□□ -0.92
CDK11B-204ENST00000407249 SPINT4Q6UDR6 99 aa9.23□□□□□ -0.93
CDK11B-204ENST00000407249 PKD1P98161 4303 aa9.22□□□□□ -0.93
CDK11B-204ENST00000407249 FAT2Q9NYQ8 4349 aa9.22□□□□□ -0.93
CDK11B-204ENST00000407249 K7ERS5 55 aa9.22□□□□□ -0.93
CDK11B-204ENST00000407249 KRTAP15-1Q3LI76 137 aa9.21□□□□□ -0.94
CDK11B-204ENST00000407249 KRTAP13-2Q52LG2 175 aa9.21□□□□□ -0.94
CDK11B-204ENST00000407249 HYDINQ4G0P3 5121 aa9.18□□□□□ -0.94
CDK11B-204ENST00000407249 KRTAP1-4P0C5Y4 121 aa9.14□□□□□ -0.95
CDK11B-204ENST00000407249 IGKV2D-30A0A075B6S6 120 aa9.13□□□□□ -0.95
CDK11B-204ENST00000407249 A0A1B0GVY2 172 aa9.12□□□□□ -0.95
CDK11B-204ENST00000407249 CRIPTQ9P021 101 aa9.09□□□□□ -0.95
CDK11B-204ENST00000407249 SACSQ9NZJ4 4579 aa9.08□□□□□ -0.96
CDK11B-204ENST00000407249 LRP1BQ9NZR2 4599 aa9.06□□□□□ -0.96
CDK11B-204ENST00000407249 TYMSOSQ8TAI1 123 aa9.04□□□□□ -0.96
CDK11B-204ENST00000407249 SPINK1P00995 79 aa9.02□□□□□ -0.97
CDK11B-204ENST00000407249 RPS29P62273 56 aaKnown RBP9□□□□□ -0.97
CDK11B-204ENST00000407249 H0YAA0 97 aa8.98□□□□□ -0.97
CDK11B-204ENST00000407249 VPS13BQ7Z7G8 4022 aa8.96□□□□□ -0.97
CDK11B-204ENST00000407249 J3QL48 77 aa8.96□□□□□ -0.97
CDK11B-204ENST00000407249 FLG2Q5D862 2391 aaPredicted RBP8.95□□□□□ -0.98
CDK11B-204ENST00000407249 Q8N1X5 172 aa8.94□□□□□ -0.98
CDK11B-204ENST00000407249 DYNC1H1Q14204 4646 aaKnown RBP8.94□□□□□ -0.98
CDK11B-204ENST00000407249 SMR3BP02814 79 aaPredicted RBP8.92□□□□□ -0.98
CDK11B-204ENST00000407249 KRTAP10-4P60372 401 aaPredicted RBP8.91□□□□□ -0.98
CDK11B-204ENST00000407249 BIRC6Q9NR09 4857 aa8.91□□□□□ -0.98
CDK11B-204ENST00000407249 RYR2Q92736 4967 aa8.89□□□□□ -0.99
CDK11B-204ENST00000407249 PKHD1P08F94 4074 aa8.86□□□□□ -0.99
CDK11B-204ENST00000407249 KRTAP17-1Q9BYP8 105 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms