RNA–Protein interactions for RNA: ENST00000405666.5

ESRRA-202, Transcript of estrogen related receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ESRRA, Length 2,283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-202ENST00000405666 LINC00208Q96KT6 92 aa12.44□□□□□ -0.42
ESRRA-202ENST00000405666 ZNF861PO60384 105 aa12.43□□□□□ -0.42
ESRRA-202ENST00000405666 LINC00483Q53H64 154 aa12.43□□□□□ -0.42
ESRRA-202ENST00000405666 A0A087WSZ3 146 aa12.42□□□□□ -0.42
ESRRA-202ENST00000405666 PKD1P98161 4303 aa12.42□□□□□ -0.42
ESRRA-202ENST00000405666 PRR4Q16378 134 aa12.42□□□□□ -0.42
ESRRA-202ENST00000405666 MOBPQ13875 183 aa12.4□□□□□ -0.42
ESRRA-202ENST00000405666 CIRBP-AS1Q8TBR5 109 aa12.4□□□□□ -0.42
ESRRA-202ENST00000405666 DSCR10P59022 87 aa12.39□□□□□ -0.43
ESRRA-202ENST00000405666 ZNF706Q9Y5V0 76 aaPredicted RBP12.38□□□□□ -0.43
ESRRA-202ENST00000405666 Q6ZSA8 131 aa12.37□□□□□ -0.43
ESRRA-202ENST00000405666 KRTAP10-1P60331 282 aa12.36□□□□□ -0.43
ESRRA-202ENST00000405666 SACSQ9NZJ4 4579 aa12.35□□□□□ -0.43
ESRRA-202ENST00000405666 IGLV7-43P04211 117 aa12.35□□□□□ -0.43
ESRRA-202ENST00000405666 IGLV9-49A0A0B4J1Y8 123 aa12.35□□□□□ -0.43
ESRRA-202ENST00000405666 PRR26Q8N8Z3 221 aa12.35□□□□□ -0.43
ESRRA-202ENST00000405666 K7EQZ3 153 aa12.32□□□□□ -0.44
ESRRA-202ENST00000405666 DEFB116Q30KQ4 102 aa12.31□□□□□ -0.44
ESRRA-202ENST00000405666 MP68P56378 58 aa12.31□□□□□ -0.44
ESRRA-202ENST00000405666 ANAPC11Q9NYG5 84 aa12.31□□□□□ -0.44
ESRRA-202ENST00000405666 H3BPC8 53 aa12.3□□□□□ -0.44
ESRRA-202ENST00000405666 LINC01554Q52M75 96 aa12.3□□□□□ -0.44
ESRRA-202ENST00000405666 RPL37AP61513 92 aaKnown RBP12.29□□□□□ -0.44
ESRRA-202ENST00000405666 LRP1BQ9NZR2 4599 aa12.27□□□□□ -0.44
ESRRA-202ENST00000405666 LINC00472Q9H8W2 130 aa12.26□□□□□ -0.45
ESRRA-202ENST00000405666 LINC01558Q9Y6Z2 57 aa12.25□□□□□ -0.45
ESRRA-202ENST00000405666 LINC00313P59037 77 aa12.23□□□□□ -0.45
ESRRA-202ENST00000405666 ASB16-AS1Q495Z4 193 aa12.22□□□□□ -0.45
ESRRA-202ENST00000405666 A0A087X002 238 aa12.18□□□□□ -0.46
ESRRA-202ENST00000405666 CASC2Q6XLA1 102 aa12.18□□□□□ -0.46
ESRRA-202ENST00000405666 PLA2G1BP04054 148 aaKnown RBP12.17□□□□□ -0.46
ESRRA-202ENST00000405666 COA5Q86WW8 74 aa12.17□□□□□ -0.46
ESRRA-202ENST00000405666 PKHD1P08F94 4074 aa12.16□□□□□ -0.46
ESRRA-202ENST00000405666 A8MWP4 228 aa12.15□□□□□ -0.46
ESRRA-202ENST00000405666 Q96NJ1 140 aa12.15□□□□□ -0.46
ESRRA-202ENST00000405666 VPS13BQ7Z7G8 4022 aa12.11□□□□□ -0.47
ESRRA-202ENST00000405666 IGLV7-46A0A075B6I9 117 aa12.08□□□□□ -0.48
ESRRA-202ENST00000405666 KRTAP29-1A8MX34 341 aaPredicted RBP12.08□□□□□ -0.48
ESRRA-202ENST00000405666 WFDC13Q8IUB5 93 aa12.08□□□□□ -0.48
ESRRA-202ENST00000405666 PRAC1Q96KF2 57 aa12.08□□□□□ -0.48
ESRRA-202ENST00000405666 H0Y9P7 68 aa12.07□□□□□ -0.48
ESRRA-202ENST00000405666 SPINK7P58062 85 aa12.06□□□□□ -0.48
ESRRA-202ENST00000405666 SSBP3-AS1Q7Z2R9 100 aa12.06□□□□□ -0.48
ESRRA-202ENST00000405666 A0A1B0GVY2 172 aa12.04□□□□□ -0.48
ESRRA-202ENST00000405666 DYNC1H1Q14204 4646 aaKnown RBP12.02□□□□□ -0.49
ESRRA-202ENST00000405666 KRTAP13-2Q52LG2 175 aa12.01□□□□□ -0.49
ESRRA-202ENST00000405666 RYR2Q92736 4967 aa12.01□□□□□ -0.49
ESRRA-202ENST00000405666 KRTAP1-4P0C5Y4 121 aa12□□□□□ -0.49
ESRRA-202ENST00000405666 MMP24-AS1A0A0U1RRL7 71 aa12□□□□□ -0.49
ESRRA-202ENST00000405666 SPAG11AQ6PDA7 123 aa11.97□□□□□ -0.49
ESRRA-202ENST00000405666 KMT2CQ8NEZ4 4911 aaKnown RBP11.96□□□□□ -0.49
ESRRA-202ENST00000405666 A0A1B0GVX0 72 aa11.93□□□□□ -0.5
ESRRA-202ENST00000405666 ADM2Q7Z4H4 148 aa11.93□□□□□ -0.5
ESRRA-202ENST00000405666 C8orf17Q9NRJ1 99 aa11.91□□□□□ -0.5
ESRRA-202ENST00000405666 APOBP04114 4563 aaKnown RBP11.89□□□□□ -0.51
ESRRA-202ENST00000405666 IGHV6-1A0A0B4J1U7 121 aa11.89□□□□□ -0.51
ESRRA-202ENST00000405666 CDK2AP2O75956 126 aa11.89□□□□□ -0.51
ESRRA-202ENST00000405666 SPINK6Q6UWN8 80 aa11.88□□□□□ -0.51
ESRRA-202ENST00000405666 SMR3BP02814 79 aaPredicted RBP11.85□□□□□ -0.51
ESRRA-202ENST00000405666 NOTCH2NLQ7Z3S9 236 aa11.85□□□□□ -0.51
ESRRA-202ENST00000405666 FAT1Q14517 4588 aa11.82□□□□□ -0.52
ESRRA-202ENST00000405666 RETNLBQ9BQ08 111 aa11.81□□□□□ -0.52
ESRRA-202ENST00000405666 KRTAP10-4P60372 401 aaPredicted RBP11.78□□□□□ -0.52
ESRRA-202ENST00000405666 TYMSOSQ8TAI1 123 aa11.78□□□□□ -0.52
ESRRA-202ENST00000405666 MRPL34Q9BQ48 92 aaKnown RBP11.77□□□□□ -0.53
ESRRA-202ENST00000405666 HRES1P13985 223 aa11.75□□□□□ -0.53
ESRRA-202ENST00000405666 TP53AIP1Q9HCN2 124 aa11.75□□□□□ -0.53
ESRRA-202ENST00000405666 SPATA8Q6RVD6 105 aa11.7□□□□□ -0.54
ESRRA-202ENST00000405666 SPINK1P00995 79 aa11.69□□□□□ -0.54
ESRRA-202ENST00000405666 PCOTHQ58A44 107 aa11.66□□□□□ -0.54
ESRRA-202ENST00000405666 CSAG1Q6PB30 78 aa11.66□□□□□ -0.54
ESRRA-202ENST00000405666 RYR3Q15413 4870 aa11.64□□□□□ -0.55
ESRRA-202ENST00000405666 LINC00304Q8N9R0 145 aa11.63□□□□□ -0.55
ESRRA-202ENST00000405666 RPS29P62273 56 aaKnown RBP11.6□□□□□ -0.55
ESRRA-202ENST00000405666 PKHD1L1Q86WI1 4243 aa11.6□□□□□ -0.55
ESRRA-202ENST00000405666 KRTAP13-3Q3SY46 172 aa11.56□□□□□ -0.56
ESRRA-202ENST00000405666 Q5W150 140 aa11.56□□□□□ -0.56
ESRRA-202ENST00000405666 KRTAP16-1A8MUX0 517 aa11.55□□□□□ -0.56
ESRRA-202ENST00000405666 HSPG2P98160 4391 aa11.52□□□□□ -0.57
ESRRA-202ENST00000405666 FAM229AH3BQW9 127 aa11.47□□□□□ -0.57
ESRRA-202ENST00000405666 ROMO1P60602 79 aa11.47□□□□□ -0.57
ESRRA-202ENST00000405666 MIR22HGQ0VDD5 57 aa11.47□□□□□ -0.57
ESRRA-202ENST00000405666 UQCR11O14957 56 aa11.44□□□□□ -0.58
ESRRA-202ENST00000405666 A0A1B0GU69 56 aa11.43□□□□□ -0.58
ESRRA-202ENST00000405666 ACYP2P14621 99 aa11.42□□□□□ -0.58
ESRRA-202ENST00000405666 Q5VSD8 79 aa11.41□□□□□ -0.58
ESRRA-202ENST00000405666 RYR1P21817 5038 aa11.4□□□□□ -0.58
ESRRA-202ENST00000405666 LRP1Q07954 4544 aaKnown RBP11.35□□□□□ -0.59
ESRRA-202ENST00000405666 KRTAP17-1Q9BYP8 105 aa11.34□□□□□ -0.59
ESRRA-202ENST00000405666 TNXBP22105 4242 aa11.33□□□□□ -0.6
ESRRA-202ENST00000405666 KRTAP10-8P60410 259 aa11.3□□□□□ -0.6
ESRRA-202ENST00000405666 FLG2Q5D862 2391 aaPredicted RBP11.29□□□□□ -0.6
ESRRA-202ENST00000405666 IGKV2-30P06310 120 aa11.29□□□□□ -0.6
ESRRA-202ENST00000405666 KRTAP25-1Q3LHN0 102 aa11.29□□□□□ -0.6
ESRRA-202ENST00000405666 Q8N1X5 172 aa11.29□□□□□ -0.6
ESRRA-202ENST00000405666 KIAA1109Q2LD37 5005 aa11.28□□□□□ -0.6
ESRRA-202ENST00000405666 DMAC1Q96GE9 116 aa11.24□□□□□ -0.61
ESRRA-202ENST00000405666 C9orf92A6NGG3 77 aa11.23□□□□□ -0.61
ESRRA-202ENST00000405666 FAT3Q8TDW7 4589 aa11.21□□□□□ -0.61
ESRRA-202ENST00000405666 EPPK1P58107 5090 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms