RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 NDUFB1O75438 58 aa12.28□□□□□ -0.44
EPCAM-202ENST00000405271 IGKV3D-7A0A0C4DH55 119 aa12.26□□□□□ -0.45
EPCAM-202ENST00000405271 A0A1B0GVX0 72 aa12.25□□□□□ -0.45
EPCAM-202ENST00000405271 PRR4Q16378 134 aa12.24□□□□□ -0.45
EPCAM-202ENST00000405271 IGLV7-46A0A075B6I9 117 aa12.23□□□□□ -0.45
EPCAM-202ENST00000405271 K7EQZ3 153 aa12.23□□□□□ -0.45
EPCAM-202ENST00000405271 PRR15Q8IV56 129 aa12.22□□□□□ -0.45
EPCAM-202ENST00000405271 LPAP08519 4548 aa12.2□□□□□ -0.46
EPCAM-202ENST00000405271 IGHV6-1A0A0B4J1U7 121 aa12.19□□□□□ -0.46
EPCAM-202ENST00000405271 Q8N9L7 120 aa12.19□□□□□ -0.46
EPCAM-202ENST00000405271 C8orf87E5RJ46 101 aa12.18□□□□□ -0.46
EPCAM-202ENST00000405271 RNF213Q63HN8 5207 aa12.16□□□□□ -0.46
EPCAM-202ENST00000405271 MT-ATP8P03928 68 aa12.13□□□□□ -0.47
EPCAM-202ENST00000405271 HIST1H4AP62805 103 aaKnown RBP12.13□□□□□ -0.47
EPCAM-202ENST00000405271 C8orf17Q9NRJ1 99 aa12.13□□□□□ -0.47
EPCAM-202ENST00000405271 LINC00313P59037 77 aa12.12□□□□□ -0.47
EPCAM-202ENST00000405271 TPRXLQ17RH7 258 aa12.11□□□□□ -0.47
EPCAM-202ENST00000405271 KRTAP13-3Q3SY46 172 aa12.11□□□□□ -0.47
EPCAM-202ENST00000405271 IMUPQ9GZP8 106 aa12.11□□□□□ -0.47
EPCAM-202ENST00000405271 MMP24-AS1A0A0U1RRL7 71 aa12.1□□□□□ -0.47
EPCAM-202ENST00000405271 C9orf92A6NGG3 77 aa12.08□□□□□ -0.48
EPCAM-202ENST00000405271 NOTCH2NLQ7Z3S9 236 aa12.08□□□□□ -0.48
EPCAM-202ENST00000405271 HCG22E2RYF7 251 aa12.06□□□□□ -0.48
EPCAM-202ENST00000405271 A0A087WVE0 104 aa12.02□□□□□ -0.48
EPCAM-202ENST00000405271 hDV103S1A0JD37 113 aa12.02□□□□□ -0.48
EPCAM-202ENST00000405271 KRTAP16-1A8MUX0 517 aa12.02□□□□□ -0.48
EPCAM-202ENST00000405271 CASC2Q6XLA1 102 aa12.02□□□□□ -0.48
EPCAM-202ENST00000405271 TMEM254Q8TBM7 123 aa12.02□□□□□ -0.48
EPCAM-202ENST00000405271 WFDC13Q8IUB5 93 aa12.01□□□□□ -0.49
EPCAM-202ENST00000405271 MRPL34Q9BQ48 92 aaKnown RBP11.98□□□□□ -0.49
EPCAM-202ENST00000405271 XP32Q5T750 250 aa11.96□□□□□ -0.49
EPCAM-202ENST00000405271 Q8N9P0 234 aaPredicted RBP11.92□□□□□ -0.5
EPCAM-202ENST00000405271 C20orf166-AS1Q96NR2 134 aa11.92□□□□□ -0.5
EPCAM-202ENST00000405271 A8MUU9 505 aa11.91□□□□□ -0.5
EPCAM-202ENST00000405271 Q75L30 129 aa11.9□□□□□ -0.5
EPCAM-202ENST00000405271 MUC2Q02817 5179 aa11.88□□□□□ -0.51
EPCAM-202ENST00000405271 FAM236AA0A1B0GUQ0 79 aa11.86□□□□□ -0.51
EPCAM-202ENST00000405271 FAM236BA0A1B0GV22 79 aa11.86□□□□□ -0.51
EPCAM-202ENST00000405271 RPL37P61927 97 aaKnown RBP11.86□□□□□ -0.51
EPCAM-202ENST00000405271 NDUFS5O43920 106 aa11.85□□□□□ -0.51
EPCAM-202ENST00000405271 SCGB1A1P11684 91 aa11.8□□□□□ -0.52
EPCAM-202ENST00000405271 TP53AIP1Q9HCN2 124 aa11.79□□□□□ -0.52
EPCAM-202ENST00000405271 ATOX1O00244 68 aa11.73□□□□□ -0.53
EPCAM-202ENST00000405271 ATP11AUNQ6ZP68 121 aa11.73□□□□□ -0.53
EPCAM-202ENST00000405271 ZCCHC13Q8WW36 166 aaKnown RBP11.72□□□□□ -0.53
EPCAM-202ENST00000405271 OCR1Q9BZK8 76 aa11.72□□□□□ -0.53
EPCAM-202ENST00000405271 SEC61BP60468 96 aaKnown RBP11.71□□□□□ -0.53
EPCAM-202ENST00000405271 SMIM20Q8N5G0 67 aa11.7□□□□□ -0.54
EPCAM-202ENST00000405271 UQCRQO14949 82 aa11.7□□□□□ -0.54
EPCAM-202ENST00000405271 PCOTHQ58A44 107 aa11.65□□□□□ -0.55
EPCAM-202ENST00000405271 TRAV22A0A0B4J277 110 aa11.63□□□□□ -0.55
EPCAM-202ENST00000405271 Q5W150 140 aa11.63□□□□□ -0.55
EPCAM-202ENST00000405271 TRAV7A0A075B6U4 112 aa11.62□□□□□ -0.55
EPCAM-202ENST00000405271 MUC17Q685J3 4493 aa11.6□□□□□ -0.55
EPCAM-202ENST00000405271 C5orf47Q569G3 176 aa11.57□□□□□ -0.56
EPCAM-202ENST00000405271 H0Y9P7 68 aa11.56□□□□□ -0.56
EPCAM-202ENST00000405271 SERP2Q8N6R1 65 aa11.55□□□□□ -0.56
EPCAM-202ENST00000405271 MP68P56378 58 aa11.54□□□□□ -0.56
EPCAM-202ENST00000405271 A0A0U1RQV1 116 aa11.51□□□□□ -0.57
EPCAM-202ENST00000405271 H3BPC8 53 aa11.49□□□□□ -0.57
EPCAM-202ENST00000405271 ANAPC13Q9BS18 74 aa11.49□□□□□ -0.57
EPCAM-202ENST00000405271 LOC101927531A0A1B0GV80 90 aa11.47□□□□□ -0.57
EPCAM-202ENST00000405271 IGKV2-30P06310 120 aa11.47□□□□□ -0.57
EPCAM-202ENST00000405271 C7orf65Q6ZTY9 151 aa11.47□□□□□ -0.57
EPCAM-202ENST00000405271 IGKV2D-30A0A075B6S6 120 aa11.45□□□□□ -0.58
EPCAM-202ENST00000405271 FAT4Q6V0I7 4981 aa11.44□□□□□ -0.58
EPCAM-202ENST00000405271 COX7CP15954 63 aa11.44□□□□□ -0.58
EPCAM-202ENST00000405271 SPINK7P58062 85 aa11.44□□□□□ -0.58
EPCAM-202ENST00000405271 LINC00208Q96KT6 92 aa11.44□□□□□ -0.58
EPCAM-202ENST00000405271 C1orf64Q8NEQ6 169 aa11.43□□□□□ -0.58
EPCAM-202ENST00000405271 KRTAP4-1Q9BYQ7 146 aa11.39□□□□□ -0.59
EPCAM-202ENST00000405271 CYP4F30PQ9H0H9 118 aa11.37□□□□□ -0.59
EPCAM-202ENST00000405271 C20orf197Q8N268 126 aa11.35□□□□□ -0.59
EPCAM-202ENST00000405271 LCE2AQ5TA79 106 aaPredicted RBP11.33□□□□□ -0.6
EPCAM-202ENST00000405271 HRES1P13985 223 aa11.3□□□□□ -0.6
EPCAM-202ENST00000405271 KLKP1Q107X0 134 aa11.3□□□□□ -0.6
EPCAM-202ENST00000405271 SNURFQ9Y675 71 aa11.29□□□□□ -0.6
EPCAM-202ENST00000405271 MPLKIPQ8TAP9 179 aa11.21□□□□□ -0.61
EPCAM-202ENST00000405271 RBM12B-AS1Q9P1G2 102 aa11.2□□□□□ -0.62
EPCAM-202ENST00000405271 CCDC179H3BU77 68 aa11.19□□□□□ -0.62
EPCAM-202ENST00000405271 NDUFC1O43677 76 aa11.15□□□□□ -0.62
EPCAM-202ENST00000405271 C4orf26Q17RF5 130 aa11.15□□□□□ -0.62
EPCAM-202ENST00000405271 COX6B2Q6YFQ2 88 aa11.11□□□□□ -0.63
EPCAM-202ENST00000405271 CYSTM1Q9H1C7 97 aa11.09□□□□□ -0.63
EPCAM-202ENST00000405271 FAM236DA0A1B0GTK5 79 aa11.09□□□□□ -0.63
EPCAM-202ENST00000405271 FAM236CP0DP71 79 aa11.09□□□□□ -0.63
EPCAM-202ENST00000405271 LCE2CQ5TA81 110 aa11.09□□□□□ -0.63
EPCAM-202ENST00000405271 PCP4P48539 62 aa11.08□□□□□ -0.64
EPCAM-202ENST00000405271 KRTAP19-2Q3LHN2 52 aa11.08□□□□□ -0.64
EPCAM-202ENST00000405271 H7BZZ5 65 aa11.06□□□□□ -0.64
EPCAM-202ENST00000405271 SPANXA2-OT1Q8N9U9 137 aa11.04□□□□□ -0.64
EPCAM-202ENST00000405271 A8MUN3 132 aa11□□□□□ -0.65
EPCAM-202ENST00000405271 KRTAP3-1Q9BYR8 98 aa10.99□□□□□ -0.65
EPCAM-202ENST00000405271 DMAC1Q96GE9 116 aa10.97□□□□□ -0.65
EPCAM-202ENST00000405271 H1FX-AS1Q4G0G2 97 aa10.95□□□□□ -0.66
EPCAM-202ENST00000405271 KRTAP9-2Q9BYQ4 174 aa10.94□□□□□ -0.66
EPCAM-202ENST00000405271 MT1HP80294 61 aa10.92□□□□□ -0.66
EPCAM-202ENST00000405271 TMEM258P61165 79 aa10.88□□□□□ -0.67
EPCAM-202ENST00000405271 ATP5EP56381 51 aaPredicted RBP10.86□□□□□ -0.67
EPCAM-202ENST00000405271 ACYP2P14621 99 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms