RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 BRCA2P51587 3418 aa3.97□□□□□ -1.77
USP47-203ENST00000399455 CRYBG3Q68DQ2 2970 aa3.96□□□□□ -1.77
USP47-203ENST00000399455 FRYQ5TBA9 3013 aa3.96□□□□□ -1.78
USP47-203ENST00000399455 NBEAL2Q6ZNJ1 2754 aa3.95□□□□□ -1.78
USP47-203ENST00000399455 LRBAP50851 2863 aa3.95□□□□□ -1.78
USP47-203ENST00000399455 TRIOO75962 3097 aa3.93□□□□□ -1.78
USP47-203ENST00000399455 CFAP54Q96N23 3096 aa3.92□□□□□ -1.78
USP47-203ENST00000399455 A0A0C4DFX4 3053 aa3.92□□□□□ -1.78
USP47-203ENST00000399455 A6NN06 94 aa3.91□□□□□ -1.78
USP47-203ENST00000399455 SZT2Q5T011 3432 aa3.9□□□□□ -1.78
USP47-203ENST00000399455 H0YAA0 97 aa3.9□□□□□ -1.79
USP47-203ENST00000399455 P0C880 135 aa3.9□□□□□ -1.79
USP47-203ENST00000399455 XIRP2A4UGR9 3374 aa3.89□□□□□ -1.79
USP47-203ENST00000399455 FLNCQ14315 2725 aa3.88□□□□□ -1.79
USP47-203ENST00000399455 COL6A3P12111 3177 aa3.87□□□□□ -1.79
USP47-203ENST00000399455 FRYLO94915 3013 aa3.86□□□□□ -1.79
USP47-203ENST00000399455 DMXL2Q8TDJ6 3036 aa3.84□□□□□ -1.79
USP47-203ENST00000399455 COL12A1Q99715 3063 aa3.84□□□□□ -1.8
USP47-203ENST00000399455 NBPF19A0A087WUL8 3843 aa3.83□□□□□ -1.8
USP47-203ENST00000399455 ATMQ13315 3056 aa3.83□□□□□ -1.8
USP47-203ENST00000399455 ANK3Q12955 4377 aaKnown RBP3.83□□□□□ -1.8
USP47-203ENST00000399455 VPS13AQ96RL7 3174 aa3.82□□□□□ -1.8
USP47-203ENST00000399455 NBEAQ8NFP9 2946 aa3.82□□□□□ -1.8
USP47-203ENST00000399455 H3BS24 57 aa3.8□□□□□ -1.8
USP47-203ENST00000399455 TENM2Q9NT68 2774 aa3.8□□□□□ -1.8
USP47-203ENST00000399455 MT1HL1P0DM35 61 aa3.79□□□□□ -1.8
USP47-203ENST00000399455 ZFHX4Q86UP3 3567 aa3.78□□□□□ -1.8
USP47-203ENST00000399455 VCANP13611 3396 aa3.78□□□□□ -1.8
USP47-203ENST00000399455 LAMA2P24043 3122 aaKnown RBP3.78□□□□□ -1.8
USP47-203ENST00000399455 KRTAP13-4Q3LI77 160 aa3.78□□□□□ -1.8
USP47-203ENST00000399455 WDFY3Q8IZQ1 3526 aa3.78□□□□□ -1.8
USP47-203ENST00000399455 NIPBLQ6KC79 2804 aaeCLIP3.77□□□□□ -1.81
USP47-203ENST00000399455 HRNRQ86YZ3 2850 aaPredicted RBP3.77□□□□□ -1.81
USP47-203ENST00000399455 CELSR3Q9NYQ7 3312 aa3.76□□□□□ -1.81
USP47-203ENST00000399455 HUWE1Q7Z6Z7 4374 aaKnown RBP3.75□□□□□ -1.81
USP47-203ENST00000399455 DNAH14Q0VDD8 3507 aa3.75□□□□□ -1.81
USP47-203ENST00000399455 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
USP47-203ENST00000399455 DMXL1Q9Y485 3027 aa3.75□□□□□ -1.81
USP47-203ENST00000399455 PDZD2O15018 2839 aa3.75□□□□□ -1.81
USP47-203ENST00000399455 REV3LO60673 3130 aa3.74□□□□□ -1.81
USP47-203ENST00000399455 KALRNO60229 2985 aa3.73□□□□□ -1.81
USP47-203ENST00000399455 TACC2O95359 2948 aa3.73□□□□□ -1.81
USP47-203ENST00000399455 TENM1Q9UKZ4 2725 aa3.72□□□□□ -1.81
USP47-203ENST00000399455 KRTAP4-5Q9BYR2 181 aa3.72□□□□□ -1.81
USP47-203ENST00000399455 ASH1LQ9NR48 2969 aaKnown RBP3.72□□□□□ -1.81
USP47-203ENST00000399455 KRTAP12-2P59991 146 aa3.71□□□□□ -1.82
USP47-203ENST00000399455 KRTAP15-1Q3LI76 137 aa3.7□□□□□ -1.82
USP47-203ENST00000399455 ZZEF1O43149 2961 aa3.69□□□□□ -1.82
USP47-203ENST00000399455 SPENQ96T58 3664 aaKnown RBP3.69□□□□□ -1.82
USP47-203ENST00000399455 BOD1L1Q8NFC6 3051 aa3.69□□□□□ -1.82
USP47-203ENST00000399455 NF1P21359 2839 aa3.68□□□□□ -1.82
USP47-203ENST00000399455 ADGRG4Q8IZF6 3080 aa3.66□□□□□ -1.82
USP47-203ENST00000399455 MYO15AQ9UKN7 3530 aa3.65□□□□□ -1.83
USP47-203ENST00000399455 KRTAP12-1P59990 96 aa3.65□□□□□ -1.83
USP47-203ENST00000399455 CELSR2Q9HCU4 2923 aa3.65□□□□□ -1.83
USP47-203ENST00000399455 MXRA5Q9NR99 2828 aa3.64□□□□□ -1.83
USP47-203ENST00000399455 DCHS2Q6V1P9 2916 aa3.64□□□□□ -1.83
USP47-203ENST00000399455 KRTAP10-4P60372 401 aaPredicted RBP3.63□□□□□ -1.83
USP47-203ENST00000399455 CELSR1Q9NYQ6 3014 aa3.63□□□□□ -1.83
USP47-203ENST00000399455 FBN2P35556 2912 aa3.62□□□□□ -1.83
USP47-203ENST00000399455 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
USP47-203ENST00000399455 TENM3Q9P273 2699 aa3.61□□□□□ -1.83
USP47-203ENST00000399455 KRTAP3-1Q9BYR8 98 aa3.61□□□□□ -1.83
USP47-203ENST00000399455 SPEGQ15772 3267 aa3.6□□□□□ -1.83
USP47-203ENST00000399455 CFAP47Q6ZTR5 3102 aa3.6□□□□□ -1.83
USP47-203ENST00000399455 RELNP78509 3460 aa3.59□□□□□ -1.83
USP47-203ENST00000399455 DNAH1Q9P2D7 4330 aa3.59□□□□□ -1.83
USP47-203ENST00000399455 FREM2Q5SZK8 3169 aa3.58□□□□□ -1.84
USP47-203ENST00000399455 ASPMQ8IZT6 3477 aa3.56□□□□□ -1.84
USP47-203ENST00000399455 ZANQ9Y493 2812 aa3.56□□□□□ -1.84
USP47-203ENST00000399455 OTOGQ6ZRI0 2925 aa3.55□□□□□ -1.84
USP47-203ENST00000399455 DMDP11532 3685 aa3.52□□□□□ -1.85
USP47-203ENST00000399455 SMG1Q96Q15 3661 aaKnown RBP3.52□□□□□ -1.85
USP47-203ENST00000399455 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
USP47-203ENST00000399455 KRTAP8-1Q8IUC2 63 aa3.51□□□□□ -1.85
USP47-203ENST00000399455 TGP01266 2768 aa3.49□□□□□ -1.85
USP47-203ENST00000399455 KRTAP10-6P60371 365 aaPredicted RBP3.48□□□□□ -1.85
USP47-203ENST00000399455 AKAP9Q99996 3911 aa3.47□□□□□ -1.85
USP47-203ENST00000399455 FBN1P35555 2871 aaKnown RBP3.46□□□□□ -1.86
USP47-203ENST00000399455 ZFHX3Q15911 3703 aa3.45□□□□□ -1.86
USP47-203ENST00000399455 PKD1L1Q8TDX9 2849 aa3.45□□□□□ -1.86
USP47-203ENST00000399455 LOC400499M0QZD8 3231 aa3.44□□□□□ -1.86
USP47-203ENST00000399455 DNAH9Q9NYC9 4486 aa3.44□□□□□ -1.86
USP47-203ENST00000399455 BSNQ9UPA5 3926 aa3.44□□□□□ -1.86
USP47-203ENST00000399455 LORP23490 312 aaPredicted RBP3.44□□□□□ -1.86
USP47-203ENST00000399455 DNAH6Q9C0G6 4158 aa3.41□□□□□ -1.86
USP47-203ENST00000399455 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
USP47-203ENST00000399455 KRTAP23-1A1A580 65 aa3.41□□□□□ -1.86
USP47-203ENST00000399455 KRTAP3-3Q9BYR6 98 aa3.4□□□□□ -1.87
USP47-203ENST00000399455 MT1HP80294 61 aa3.4□□□□□ -1.87
USP47-203ENST00000399455 VWFP04275 2813 aa3.39□□□□□ -1.87
USP47-203ENST00000399455 TRRAPQ9Y4A5 3859 aa3.38□□□□□ -1.87
USP47-203ENST00000399455 FBN3Q75N90 2809 aa3.37□□□□□ -1.87
USP47-203ENST00000399455 DNAH3Q8TD57 4116 aa3.36□□□□□ -1.87
USP47-203ENST00000399455 DNAH2Q9P225 4427 aa3.36□□□□□ -1.87
USP47-203ENST00000399455 KRTAP3-2Q9BYR7 98 aa3.35□□□□□ -1.87
USP47-203ENST00000399455 LAMA5O15230 3695 aa3.34□□□□□ -1.88
USP47-203ENST00000399455 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
USP47-203ENST00000399455 MUC3AQ02505 3323 aa3.33□□□□□ -1.88
USP47-203ENST00000399455 DNAH10Q8IVF4 4471 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms