RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 VPS13BQ7Z7G8 4022 aa9.24□□□□□ -0.93
COL25A1-201ENST00000399126 SEC61BP60468 96 aaKnown RBP9.23□□□□□ -0.93
COL25A1-201ENST00000399126 IGKV4-1P06312 121 aa9.22□□□□□ -0.93
COL25A1-201ENST00000399126 RYR3Q15413 4870 aa9.22□□□□□ -0.93
COL25A1-201ENST00000399126 LIMD2Q9BT23 127 aa9.22□□□□□ -0.93
COL25A1-201ENST00000399126 A0A1W2PNM2 257 aa9.21□□□□□ -0.94
COL25A1-201ENST00000399126 Q6ZSA8 131 aa9.21□□□□□ -0.94
COL25A1-201ENST00000399126 ZCCHC13Q8WW36 166 aaKnown RBP9.18□□□□□ -0.94
COL25A1-201ENST00000399126 SPRR1BP22528 89 aa9.17□□□□□ -0.94
COL25A1-201ENST00000399126 IGFL1Q6UW32 110 aa9.17□□□□□ -0.94
COL25A1-201ENST00000399126 Q8N9L7 120 aa9.17□□□□□ -0.94
COL25A1-201ENST00000399126 CDK2AP2O75956 126 aa9.16□□□□□ -0.94
COL25A1-201ENST00000399126 APOBP04114 4563 aaKnown RBP9.16□□□□□ -0.94
COL25A1-201ENST00000399126 ANAPC11Q9NYG5 84 aa9.16□□□□□ -0.94
COL25A1-201ENST00000399126 ZNF861PO60384 105 aa9.15□□□□□ -0.94
COL25A1-201ENST00000399126 PRR15LQ9BU68 103 aa9.15□□□□□ -0.94
COL25A1-201ENST00000399126 Q8NBF4 154 aa9.15□□□□□ -0.95
COL25A1-201ENST00000399126 SPRR4Q96PI1 79 aa9.15□□□□□ -0.95
COL25A1-201ENST00000399126 A6NED7 52 aa9.14□□□□□ -0.95
COL25A1-201ENST00000399126 Q8N9P0 234 aaPredicted RBP9.14□□□□□ -0.95
COL25A1-201ENST00000399126 IGLV7-43P04211 117 aa9.13□□□□□ -0.95
COL25A1-201ENST00000399126 CDC42SE1Q9NRR8 79 aa9.13□□□□□ -0.95
COL25A1-201ENST00000399126 FAT1Q14517 4588 aa9.13□□□□□ -0.95
COL25A1-201ENST00000399126 IGLV9-49A0A0B4J1Y8 123 aa9.12□□□□□ -0.95
COL25A1-201ENST00000399126 IGLV8-61A0A075B6I0 122 aa9.12□□□□□ -0.95
COL25A1-201ENST00000399126 A0A1B0GVY2 172 aa9.1□□□□□ -0.95
COL25A1-201ENST00000399126 PRR4Q16378 134 aa9.1□□□□□ -0.95
COL25A1-201ENST00000399126 NDUFB1O75438 58 aa9.09□□□□□ -0.95
COL25A1-201ENST00000399126 ADM2Q7Z4H4 148 aa9.09□□□□□ -0.95
COL25A1-201ENST00000399126 LINC00483Q53H64 154 aa9.08□□□□□ -0.96
COL25A1-201ENST00000399126 PRAC1Q96KF2 57 aa9.08□□□□□ -0.96
COL25A1-201ENST00000399126 MOBPQ13875 183 aa9.07□□□□□ -0.96
COL25A1-201ENST00000399126 LOC101927531A0A1B0GV80 90 aa9.06□□□□□ -0.96
COL25A1-201ENST00000399126 A0A087WSZ3 146 aa9.05□□□□□ -0.96
COL25A1-201ENST00000399126 RETNLBQ9BQ08 111 aa9.04□□□□□ -0.96
COL25A1-201ENST00000399126 LINC00208Q96KT6 92 aa9.03□□□□□ -0.96
COL25A1-201ENST00000399126 DEFB116Q30KQ4 102 aa9.01□□□□□ -0.97
COL25A1-201ENST00000399126 NOTCH2NLQ7Z3S9 236 aa9.01□□□□□ -0.97
COL25A1-201ENST00000399126 A0A1B0GW54 56 aa9□□□□□ -0.97
COL25A1-201ENST00000399126 SMR3BP02814 79 aaPredicted RBP8.99□□□□□ -0.97
COL25A1-201ENST00000399126 SPANXA2-OT1Q8N9U9 137 aa8.96□□□□□ -0.97
COL25A1-201ENST00000399126 A0A087X002 238 aa8.95□□□□□ -0.98
COL25A1-201ENST00000399126 DSCR10P59022 87 aa8.94□□□□□ -0.98
COL25A1-201ENST00000399126 KRTAP16-1A8MUX0 517 aa8.92□□□□□ -0.98
COL25A1-201ENST00000399126 K7EQZ3 153 aa8.91□□□□□ -0.98
COL25A1-201ENST00000399126 KRTAP1-4P0C5Y4 121 aa8.91□□□□□ -0.98
COL25A1-201ENST00000399126 RPL37AP61513 92 aaKnown RBP8.91□□□□□ -0.98
COL25A1-201ENST00000399126 CASC2Q6XLA1 102 aa8.91□□□□□ -0.98
COL25A1-201ENST00000399126 KRTAP13-2Q52LG2 175 aa8.9□□□□□ -0.98
COL25A1-201ENST00000399126 HSPG2P98160 4391 aa8.9□□□□□ -0.98
COL25A1-201ENST00000399126 EPPK1P58107 5090 aaKnown RBP8.89□□□□□ -0.99
COL25A1-201ENST00000399126 LINC00472Q9H8W2 130 aa8.88□□□□□ -0.99
COL25A1-201ENST00000399126 RYR1P21817 5038 aa8.86□□□□□ -0.99
COL25A1-201ENST00000399126 FAM229AH3BQW9 127 aa8.85□□□□□ -0.99
COL25A1-201ENST00000399126 Q96NJ1 140 aa8.85□□□□□ -0.99
COL25A1-201ENST00000399126 LINC01558Q9Y6Z2 57 aa8.85□□□□□ -0.99
COL25A1-201ENST00000399126 KIAA1109Q2LD37 5005 aa8.85□□□□□ -0.99
COL25A1-201ENST00000399126 KRTAP10-4P60372 401 aaPredicted RBP8.84□□□□□ -0.99
COL25A1-201ENST00000399126 ASB16-AS1Q495Z4 193 aa8.83□□□□□ -1
COL25A1-201ENST00000399126 COA5Q86WW8 74 aa8.83□□□□□ -1
COL25A1-201ENST00000399126 H3BPC8 53 aa8.81□□□□□ -1
COL25A1-201ENST00000399126 SSBP3-AS1Q7Z2R9 100 aa8.81□□□□□ -1
COL25A1-201ENST00000399126 SPINK7P58062 85 aa8.8□□□□□ -1
COL25A1-201ENST00000399126 SPINK6Q6UWN8 80 aa8.8□□□□□ -1
COL25A1-201ENST00000399126 PKHD1L1Q86WI1 4243 aa8.78□□□□□ -1
COL25A1-201ENST00000399126 LRP1Q07954 4544 aaKnown RBP8.78□□□□□ -1
COL25A1-201ENST00000399126 A8MWP4 228 aa8.77□□□□□ -1.01
COL25A1-201ENST00000399126 ROMO1P60602 79 aa8.77□□□□□ -1.01
COL25A1-201ENST00000399126 WFDC13Q8IUB5 93 aa8.77□□□□□ -1.01
COL25A1-201ENST00000399126 SPAG11AQ6PDA7 123 aa8.73□□□□□ -1.01
COL25A1-201ENST00000399126 TYMSOSQ8TAI1 123 aa8.73□□□□□ -1.01
COL25A1-201ENST00000399126 H0Y9P7 68 aa8.72□□□□□ -1.01
COL25A1-201ENST00000399126 KRTAP17-1Q9BYP8 105 aa8.71□□□□□ -1.01
COL25A1-201ENST00000399126 IGLV7-46A0A075B6I9 117 aa8.69□□□□□ -1.02
COL25A1-201ENST00000399126 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
COL25A1-201ENST00000399126 MMP24-AS1A0A0U1RRL7 71 aa8.68□□□□□ -1.02
COL25A1-201ENST00000399126 C8orf17Q9NRJ1 99 aa8.66□□□□□ -1.02
COL25A1-201ENST00000399126 A0A1B0GVX0 72 aa8.66□□□□□ -1.02
COL25A1-201ENST00000399126 MYCBP2O75592 4640 aa8.65□□□□□ -1.02
COL25A1-201ENST00000399126 TNXBP22105 4242 aa8.65□□□□□ -1.02
COL25A1-201ENST00000399126 FLG2Q5D862 2391 aaPredicted RBP8.65□□□□□ -1.02
COL25A1-201ENST00000399126 Q5VSD8 79 aa8.65□□□□□ -1.03
COL25A1-201ENST00000399126 FAT3Q8TDW7 4589 aa8.63□□□□□ -1.03
COL25A1-201ENST00000399126 LUZP6Q538Z0 58 aa8.63□□□□□ -1.03
COL25A1-201ENST00000399126 LINC00304Q8N9R0 145 aa8.62□□□□□ -1.03
COL25A1-201ENST00000399126 P0C880 135 aa8.59□□□□□ -1.03
COL25A1-201ENST00000399126 SPINK1P00995 79 aa8.58□□□□□ -1.04
COL25A1-201ENST00000399126 CSAG1Q6PB30 78 aa8.58□□□□□ -1.04
COL25A1-201ENST00000399126 MIR22HGQ0VDD5 57 aa8.54□□□□□ -1.04
COL25A1-201ENST00000399126 MRPL34Q9BQ48 92 aaKnown RBP8.52□□□□□ -1.05
COL25A1-201ENST00000399126 DMBT1Q9UGM3 2413 aaPredicted RBP8.49□□□□□ -1.05
COL25A1-201ENST00000399126 HRES1P13985 223 aa8.48□□□□□ -1.05
COL25A1-201ENST00000399126 PCOTHQ58A44 107 aa8.48□□□□□ -1.05
COL25A1-201ENST00000399126 Q8N1X5 172 aa8.48□□□□□ -1.05
COL25A1-201ENST00000399126 RPS29P62273 56 aaKnown RBP8.47□□□□□ -1.05
COL25A1-201ENST00000399126 SPATA8Q6RVD6 105 aa8.46□□□□□ -1.06
COL25A1-201ENST00000399126 KRTAP10-8P60410 259 aa8.44□□□□□ -1.06
COL25A1-201ENST00000399126 ABCA13Q86UQ4 5058 aa8.43□□□□□ -1.06
COL25A1-201ENST00000399126 Q5W150 140 aa8.41□□□□□ -1.06
COL25A1-201ENST00000399126 TP53AIP1Q9HCN2 124 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms