RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 ASB16-AS1Q495Z4 193 aa4.81□□□□□ -1.64
PTPRD-204ENST00000397606 OCR1Q9BZK8 76 aa4.8□□□□□ -1.64
PTPRD-204ENST00000397606 VPS13CQ709C8 3753 aa4.8□□□□□ -1.64
PTPRD-204ENST00000397606 A0A1B0GVY2 172 aa4.8□□□□□ -1.64
PTPRD-204ENST00000397606 Q5XG85 94 aa4.79□□□□□ -1.64
PTPRD-204ENST00000397606 ZCCHC13Q8WW36 166 aaKnown RBP4.79□□□□□ -1.64
PTPRD-204ENST00000397606 K7ERS5 55 aa4.78□□□□□ -1.64
PTPRD-204ENST00000397606 SEC61BP60468 96 aaKnown RBP4.78□□□□□ -1.65
PTPRD-204ENST00000397606 A0A0U1RQV1 116 aa4.76□□□□□ -1.65
PTPRD-204ENST00000397606 A6NED7 52 aa4.75□□□□□ -1.65
PTPRD-204ENST00000397606 KRTAP1-4P0C5Y4 121 aa4.74□□□□□ -1.65
PTPRD-204ENST00000397606 CUBNO60494 3623 aa4.73□□□□□ -1.65
PTPRD-204ENST00000397606 SPANXA2-OT1Q8N9U9 137 aa4.73□□□□□ -1.65
PTPRD-204ENST00000397606 A0A1B0GU69 56 aa4.72□□□□□ -1.65
PTPRD-204ENST00000397606 H7BZZ5 65 aa4.72□□□□□ -1.65
PTPRD-204ENST00000397606 COA5Q86WW8 74 aa4.72□□□□□ -1.65
PTPRD-204ENST00000397606 BRK1Q8WUW1 75 aa4.71□□□□□ -1.65
PTPRD-204ENST00000397606 Q5W150 140 aa4.7□□□□□ -1.66
PTPRD-204ENST00000397606 SPINK7P58062 85 aa4.7□□□□□ -1.66
PTPRD-204ENST00000397606 RPS28P62857 69 aaKnown RBP4.7□□□□□ -1.66
PTPRD-204ENST00000397606 MEGF8Q7Z7M0 2845 aa4.7□□□□□ -1.66
PTPRD-204ENST00000397606 A8MUN3 132 aa4.69□□□□□ -1.66
PTPRD-204ENST00000397606 CYP4F30PQ9H0H9 118 aa4.69□□□□□ -1.66
PTPRD-204ENST00000397606 KRTAP29-1A8MX34 341 aaPredicted RBP4.69□□□□□ -1.66
PTPRD-204ENST00000397606 PSPHP1O15172 72 aa4.68□□□□□ -1.66
PTPRD-204ENST00000397606 HRES1P13985 223 aa4.68□□□□□ -1.66
PTPRD-204ENST00000397606 C4orf26Q17RF5 130 aa4.68□□□□□ -1.66
PTPRD-204ENST00000397606 Q8N9P0 234 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-204ENST00000397606 NOTCH2NLQ7Z3S9 236 aa4.66□□□□□ -1.66
PTPRD-204ENST00000397606 PRO0628Q9UI54 55 aa4.65□□□□□ -1.67
PTPRD-204ENST00000397606 HUWE1Q7Z6Z7 4374 aaKnown RBP4.63□□□□□ -1.67
PTPRD-204ENST00000397606 Q75L30 129 aa4.63□□□□□ -1.67
PTPRD-204ENST00000397606 M0R2T5 61 aa4.6□□□□□ -1.67
PTPRD-204ENST00000397606 RPL37P61927 97 aaKnown RBP4.59□□□□□ -1.67
PTPRD-204ENST00000397606 KRTAP10-8P60410 259 aa4.58□□□□□ -1.68
PTPRD-204ENST00000397606 CSAG1Q6PB30 78 aa4.58□□□□□ -1.68
PTPRD-204ENST00000397606 S4R3F8 94 aa4.57□□□□□ -1.68
PTPRD-204ENST00000397606 COL7A1Q02388 2944 aa4.57□□□□□ -1.68
PTPRD-204ENST00000397606 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
PTPRD-204ENST00000397606 DNAH9Q9NYC9 4486 aa4.56□□□□□ -1.68
PTPRD-204ENST00000397606 A8MUU9 505 aa4.56□□□□□ -1.68
PTPRD-204ENST00000397606 H3BS24 57 aa4.56□□□□□ -1.68
PTPRD-204ENST00000397606 UQCR11O14957 56 aa4.55□□□□□ -1.68
PTPRD-204ENST00000397606 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
PTPRD-204ENST00000397606 TPRXLQ17RH7 258 aa4.53□□□□□ -1.68
PTPRD-204ENST00000397606 DMAC1Q96GE9 116 aa4.53□□□□□ -1.68
PTPRD-204ENST00000397606 DNHD1Q96M86 4753 aa4.51□□□□□ -1.69
PTPRD-204ENST00000397606 XP32Q5T750 250 aa4.51□□□□□ -1.69
PTPRD-204ENST00000397606 CYSTM1Q9H1C7 97 aa4.51□□□□□ -1.69
PTPRD-204ENST00000397606 H1FX-AS1Q4G0G2 97 aa4.47□□□□□ -1.69
PTPRD-204ENST00000397606 MIR22HGQ0VDD5 57 aa4.47□□□□□ -1.69
PTPRD-204ENST00000397606 KRTAP13-3Q3SY46 172 aa4.47□□□□□ -1.69
PTPRD-204ENST00000397606 ANK2Q01484 3957 aa4.47□□□□□ -1.69
PTPRD-204ENST00000397606 SRRM2Q9UQ35 2752 aaKnown RBP4.46□□□□□ -1.7
PTPRD-204ENST00000397606 LINC01554Q52M75 96 aa4.45□□□□□ -1.7
PTPRD-204ENST00000397606 ALMS1Q8TCU4 4167 aa4.44□□□□□ -1.7
PTPRD-204ENST00000397606 Q1T7F1 81 aa4.44□□□□□ -1.7
PTPRD-204ENST00000397606 A0A1B0GU33 70 aa4.44□□□□□ -1.7
PTPRD-204ENST00000397606 KRTAP16-1A8MUX0 517 aa4.44□□□□□ -1.7
PTPRD-204ENST00000397606 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
PTPRD-204ENST00000397606 A0A0D9SG42 100 aa4.4□□□□□ -1.7
PTPRD-204ENST00000397606 A0A0A0MQY5 61 aa4.4□□□□□ -1.71
PTPRD-204ENST00000397606 KRTAP10-4P60372 401 aaPredicted RBP4.4□□□□□ -1.71
PTPRD-204ENST00000397606 R4GN34 69 aa4.39□□□□□ -1.71
PTPRD-204ENST00000397606 SPINT4Q6UDR6 99 aa4.38□□□□□ -1.71
PTPRD-204ENST00000397606 PLECQ15149 4684 aaKnown RBP4.38□□□□□ -1.71
PTPRD-204ENST00000397606 PRKDCP78527 4128 aaKnown RBP4.36□□□□□ -1.71
PTPRD-204ENST00000397606 MT1HL1P0DM35 61 aa4.36□□□□□ -1.71
PTPRD-204ENST00000397606 CDC42SE1Q9NRR8 79 aa4.34□□□□□ -1.71
PTPRD-204ENST00000397606 ADM2Q7Z4H4 148 aa4.34□□□□□ -1.72
PTPRD-204ENST00000397606 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
PTPRD-204ENST00000397606 VPS13DQ5THJ4 4388 aa4.33□□□□□ -1.72
PTPRD-204ENST00000397606 KRTAP4-5Q9BYR2 181 aa4.32□□□□□ -1.72
PTPRD-204ENST00000397606 M0QZ58 72 aa4.31□□□□□ -1.72
PTPRD-204ENST00000397606 STARD9Q9P2P6 4700 aa4.31□□□□□ -1.72
PTPRD-204ENST00000397606 DNAH3Q8TD57 4116 aa4.3□□□□□ -1.72
PTPRD-204ENST00000397606 DNAH1Q9P2D7 4330 aa4.29□□□□□ -1.72
PTPRD-204ENST00000397606 LCA10Q71F78 164 aa4.29□□□□□ -1.72
PTPRD-204ENST00000397606 Q5VV11 94 aa4.28□□□□□ -1.72
PTPRD-204ENST00000397606 DNAH5Q8TE73 4624 aa4.28□□□□□ -1.72
PTPRD-204ENST00000397606 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
PTPRD-204ENST00000397606 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
PTPRD-204ENST00000397606 DNAH11Q96DT5 4516 aa4.25□□□□□ -1.73
PTPRD-204ENST00000397606 CMYA5Q8N3K9 4069 aa4.23□□□□□ -1.73
PTPRD-204ENST00000397606 PLAC4Q8WY50 150 aa4.21□□□□□ -1.73
PTPRD-204ENST00000397606 DNAH17Q9UFH2 4485 aa4.2□□□□□ -1.74
PTPRD-204ENST00000397606 SPATA8Q6RVD6 105 aa4.2□□□□□ -1.74
PTPRD-204ENST00000397606 DNAH10Q8IVF4 4471 aa4.2□□□□□ -1.74
PTPRD-204ENST00000397606 CSMD3Q7Z407 3707 aa4.2□□□□□ -1.74
PTPRD-204ENST00000397606 DYNC1H1Q14204 4646 aaKnown RBP4.18□□□□□ -1.74
PTPRD-204ENST00000397606 LRP1BQ9NZR2 4599 aa4.15□□□□□ -1.75
PTPRD-204ENST00000397606 DYNC2H1Q8NCM8 4307 aaKnown RBP4.14□□□□□ -1.75
PTPRD-204ENST00000397606 LCE2DQ5TA82 110 aaPredicted RBP4.12□□□□□ -1.75
PTPRD-204ENST00000397606 DNAH2Q9P225 4427 aa4.11□□□□□ -1.75
PTPRD-204ENST00000397606 KMT2AQ03164 3969 aa4.11□□□□□ -1.75
PTPRD-204ENST00000397606 KRTAP10-10P60014 251 aa4.1□□□□□ -1.75
PTPRD-204ENST00000397606 A8MU10 97 aa4.09□□□□□ -1.76
PTPRD-204ENST00000397606 FAT1Q14517 4588 aa4.08□□□□□ -1.76
PTPRD-204ENST00000397606 RYR2Q92736 4967 aa4.08□□□□□ -1.76
PTPRD-204ENST00000397606 FAT2Q9NYQ8 4349 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms