RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 ACYP1P07311 99 aa10.71□□□□□ -0.69
PSEN1-203ENST00000394157 UBL5Q9BZL1 73 aa10.7□□□□□ -0.7
PSEN1-203ENST00000394157 FAM240AA0A1B0GVK7 77 aa10.69□□□□□ -0.7
PSEN1-203ENST00000394157 LINC00846Q9NV44 126 aa10.69□□□□□ -0.7
PSEN1-203ENST00000394157 DEFB116Q30KQ4 102 aa10.68□□□□□ -0.7
PSEN1-203ENST00000394157 Q6ZVQ6 151 aa10.67□□□□□ -0.7
PSEN1-203ENST00000394157 CDIP1Q9H305 208 aa10.67□□□□□ -0.7
PSEN1-203ENST00000394157 KRTAP9-2Q9BYQ4 174 aa10.66□□□□□ -0.7
PSEN1-203ENST00000394157 NDUFB1O75438 58 aa10.64□□□□□ -0.71
PSEN1-203ENST00000394157 J3QR89 54 aa10.63□□□□□ -0.71
PSEN1-203ENST00000394157 A8MWP4 228 aa10.62□□□□□ -0.71
PSEN1-203ENST00000394157 BPY2O14599 106 aa10.62□□□□□ -0.71
PSEN1-203ENST00000394157 A0A1B0GVX0 72 aa10.61□□□□□ -0.71
PSEN1-203ENST00000394157 C9orf92A6NGG3 77 aa10.61□□□□□ -0.71
PSEN1-203ENST00000394157 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.61□□□□□ -0.71
PSEN1-203ENST00000394157 KRTAP4-12Q9BQ66 201 aa10.6□□□□□ -0.71
PSEN1-203ENST00000394157 LRP2P98164 4655 aa10.59□□□□□ -0.71
PSEN1-203ENST00000394157 LPAP08519 4548 aa10.59□□□□□ -0.71
PSEN1-203ENST00000394157 KRTAP9-6A0A140TA67 174 aa10.58□□□□□ -0.72
PSEN1-203ENST00000394157 C8orf87E5RJ46 101 aa10.58□□□□□ -0.72
PSEN1-203ENST00000394157 IGHV6-1A0A0B4J1U7 121 aa10.57□□□□□ -0.72
PSEN1-203ENST00000394157 DSCR10P59022 87 aa10.56□□□□□ -0.72
PSEN1-203ENST00000394157 LINC00313P59037 77 aa10.56□□□□□ -0.72
PSEN1-203ENST00000394157 IGKV3D-7A0A0C4DH55 119 aa10.55□□□□□ -0.72
PSEN1-203ENST00000394157 PRR15Q8IV56 129 aa10.55□□□□□ -0.72
PSEN1-203ENST00000394157 KRTAP19-1Q8IUB9 90 aa10.53□□□□□ -0.72
PSEN1-203ENST00000394157 CXCL6P80162 114 aa10.52□□□□□ -0.73
PSEN1-203ENST00000394157 ATP5EP2Q5VTU8 51 aa10.49□□□□□ -0.73
PSEN1-203ENST00000394157 K7EQZ3 153 aa10.48□□□□□ -0.73
PSEN1-203ENST00000394157 NOTCH2NLQ7Z3S9 236 aa10.48□□□□□ -0.73
PSEN1-203ENST00000394157 C8orf17Q9NRJ1 99 aa10.48□□□□□ -0.73
PSEN1-203ENST00000394157 K7ERU9 68 aa10.47□□□□□ -0.73
PSEN1-203ENST00000394157 SEC61BP60468 96 aaKnown RBP10.46□□□□□ -0.73
PSEN1-203ENST00000394157 LCE3BQ5TA77 95 aa10.46□□□□□ -0.73
PSEN1-203ENST00000394157 Q75L30 129 aa10.46□□□□□ -0.73
PSEN1-203ENST00000394157 KRTAP16-1A8MUX0 517 aa10.45□□□□□ -0.74
PSEN1-203ENST00000394157 RPL37P61927 97 aaKnown RBP10.45□□□□□ -0.74
PSEN1-203ENST00000394157 LINC00643Q86TS7 51 aa10.45□□□□□ -0.74
PSEN1-203ENST00000394157 C20orf166-AS1Q96NR2 134 aa10.45□□□□□ -0.74
PSEN1-203ENST00000394157 A8MUU9 505 aa10.43□□□□□ -0.74
PSEN1-203ENST00000394157 MMP24-AS1A0A0U1RRL7 71 aa10.41□□□□□ -0.74
PSEN1-203ENST00000394157 Q8N9L7 120 aa10.41□□□□□ -0.74
PSEN1-203ENST00000394157 hDV103S1A0JD37 113 aa10.38□□□□□ -0.75
PSEN1-203ENST00000394157 TMEM254Q8TBM7 123 aa10.38□□□□□ -0.75
PSEN1-203ENST00000394157 Q8N9P0 234 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-203ENST00000394157 ATP11AUNQ6ZP68 121 aa10.35□□□□□ -0.75
PSEN1-203ENST00000394157 MRPL34Q9BQ48 92 aaKnown RBP10.34□□□□□ -0.75
PSEN1-203ENST00000394157 HCG22E2RYF7 251 aa10.33□□□□□ -0.76
PSEN1-203ENST00000394157 CASC2Q6XLA1 102 aa10.33□□□□□ -0.76
PSEN1-203ENST00000394157 PCOTHQ58A44 107 aa10.32□□□□□ -0.76
PSEN1-203ENST00000394157 MUC17Q685J3 4493 aa10.32□□□□□ -0.76
PSEN1-203ENST00000394157 WFDC13Q8IUB5 93 aa10.3□□□□□ -0.76
PSEN1-203ENST00000394157 HIST1H4AP62805 103 aaKnown RBP10.28□□□□□ -0.76
PSEN1-203ENST00000394157 KRTAP19-4Q3LI73 84 aa10.28□□□□□ -0.76
PSEN1-203ENST00000394157 NDUFS5O43920 106 aa10.22□□□□□ -0.77
PSEN1-203ENST00000394157 ZCCHC13Q8WW36 166 aaKnown RBP10.22□□□□□ -0.77
PSEN1-203ENST00000394157 IMUPQ9GZP8 106 aa10.19□□□□□ -0.78
PSEN1-203ENST00000394157 RNF213Q63HN8 5207 aa10.17□□□□□ -0.78
PSEN1-203ENST00000394157 TP53AIP1Q9HCN2 124 aa10.16□□□□□ -0.78
PSEN1-203ENST00000394157 A0A087WVE0 104 aa10.15□□□□□ -0.78
PSEN1-203ENST00000394157 KRTAP4-1Q9BYQ7 146 aa10.13□□□□□ -0.79
PSEN1-203ENST00000394157 MT-ATP8P03928 68 aa10.12□□□□□ -0.79
PSEN1-203ENST00000394157 KRTAP9-9Q9BYP9 154 aa10.12□□□□□ -0.79
PSEN1-203ENST00000394157 KRTAP9-4Q9BYQ2 154 aa10.12□□□□□ -0.79
PSEN1-203ENST00000394157 MUC2Q02817 5179 aa10.07□□□□□ -0.8
PSEN1-203ENST00000394157 Q5W150 140 aa10.05□□□□□ -0.8
PSEN1-203ENST00000394157 A0A0U1RQV1 116 aa10.03□□□□□ -0.8
PSEN1-203ENST00000394157 UQCRQO14949 82 aa10.01□□□□□ -0.81
PSEN1-203ENST00000394157 SPINK7P58062 85 aa10□□□□□ -0.81
PSEN1-203ENST00000394157 SCGB1A1P11684 91 aa9.98□□□□□ -0.81
PSEN1-203ENST00000394157 TRAV22A0A0B4J277 110 aa9.96□□□□□ -0.82
PSEN1-203ENST00000394157 C7orf65Q6ZTY9 151 aa9.95□□□□□ -0.82
PSEN1-203ENST00000394157 OCR1Q9BZK8 76 aa9.95□□□□□ -0.82
PSEN1-203ENST00000394157 KRTAP4-8A0A0G2JLE6 195 aa9.92□□□□□ -0.82
PSEN1-203ENST00000394157 FAM236AA0A1B0GUQ0 79 aa9.92□□□□□ -0.82
PSEN1-203ENST00000394157 FAM236BA0A1B0GV22 79 aa9.92□□□□□ -0.82
PSEN1-203ENST00000394157 ATOX1O00244 68 aa9.92□□□□□ -0.82
PSEN1-203ENST00000394157 IGKV2D-30A0A075B6S6 120 aa9.91□□□□□ -0.82
PSEN1-203ENST00000394157 IGKV2-30P06310 120 aa9.91□□□□□ -0.82
PSEN1-203ENST00000394157 HRES1P13985 223 aa9.91□□□□□ -0.82
PSEN1-203ENST00000394157 SMIM20Q8N5G0 67 aa9.91□□□□□ -0.82
PSEN1-203ENST00000394157 RBM12B-AS1Q9P1G2 102 aa9.88□□□□□ -0.83
PSEN1-203ENST00000394157 H0Y9P7 68 aa9.87□□□□□ -0.83
PSEN1-203ENST00000394157 C5orf47Q569G3 176 aa9.87□□□□□ -0.83
PSEN1-203ENST00000394157 MPLKIPQ8TAP9 179 aa9.87□□□□□ -0.83
PSEN1-203ENST00000394157 LOC101927531A0A1B0GV80 90 aa9.86□□□□□ -0.83
PSEN1-203ENST00000394157 KRTAP19-2Q3LHN2 52 aa9.85□□□□□ -0.83
PSEN1-203ENST00000394157 MP68P56378 58 aa9.84□□□□□ -0.83
PSEN1-203ENST00000394157 COX6B2Q6YFQ2 88 aa9.83□□□□□ -0.84
PSEN1-203ENST00000394157 TRAV7A0A075B6U4 112 aa9.81□□□□□ -0.84
PSEN1-203ENST00000394157 FAT4Q6V0I7 4981 aa9.81□□□□□ -0.84
PSEN1-203ENST00000394157 H3BPC8 53 aa9.8□□□□□ -0.84
PSEN1-203ENST00000394157 LCE4AQ5TA78 99 aa9.8□□□□□ -0.84
PSEN1-203ENST00000394157 CYP4F30PQ9H0H9 118 aa9.8□□□□□ -0.84
PSEN1-203ENST00000394157 LCE1DQ5T752 114 aa9.78□□□□□ -0.84
PSEN1-203ENST00000394157 C1orf64Q8NEQ6 169 aa9.78□□□□□ -0.84
PSEN1-203ENST00000394157 FAM236DA0A1B0GTK5 79 aa9.77□□□□□ -0.85
PSEN1-203ENST00000394157 FAM236CP0DP71 79 aa9.77□□□□□ -0.85
PSEN1-203ENST00000394157 LINC00208Q96KT6 92 aa9.76□□□□□ -0.85
PSEN1-203ENST00000394157 SERP2Q8N6R1 65 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms