RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 COA5Q86WW8 74 aa11.07□□□□□ -0.64
TRAF3-203ENST00000392745 PCOTHQ58A44 107 aa11.06□□□□□ -0.64
TRAF3-203ENST00000392745 PSORS1C2Q9UIG4 136 aa11.06□□□□□ -0.64
TRAF3-203ENST00000392745 SACSQ9NZJ4 4579 aa11.05□□□□□ -0.64
TRAF3-203ENST00000392745 IGLV7-46A0A075B6I9 117 aa11.04□□□□□ -0.64
TRAF3-203ENST00000392745 Q96NJ1 140 aa11.02□□□□□ -0.65
TRAF3-203ENST00000392745 CD164Q04900 197 aa11□□□□□ -0.65
TRAF3-203ENST00000392745 IGLV9-49A0A0B4J1Y8 123 aa10.99□□□□□ -0.65
TRAF3-203ENST00000392745 LCA10Q71F78 164 aa10.99□□□□□ -0.65
TRAF3-203ENST00000392745 Q75L30 129 aa10.98□□□□□ -0.65
TRAF3-203ENST00000392745 CIRBP-AS1Q8TBR5 109 aa10.98□□□□□ -0.65
TRAF3-203ENST00000392745 ASB16-AS1Q495Z4 193 aa10.97□□□□□ -0.65
TRAF3-203ENST00000392745 KRTAP10-1P60331 282 aa10.97□□□□□ -0.65
TRAF3-203ENST00000392745 LOC101927531A0A1B0GV80 90 aa10.96□□□□□ -0.65
TRAF3-203ENST00000392745 SPTSSBQ8NFR3 76 aa10.96□□□□□ -0.65
TRAF3-203ENST00000392745 A6NED7 52 aa10.95□□□□□ -0.66
TRAF3-203ENST00000392745 C8orf17Q9NRJ1 99 aa10.94□□□□□ -0.66
TRAF3-203ENST00000392745 TP53AIP1Q9HCN2 124 aa10.94□□□□□ -0.66
TRAF3-203ENST00000392745 ZNF861PO60384 105 aa10.93□□□□□ -0.66
TRAF3-203ENST00000392745 MOBPQ13875 183 aa10.93□□□□□ -0.66
TRAF3-203ENST00000392745 Q6ZSA8 131 aa10.93□□□□□ -0.66
TRAF3-203ENST00000392745 NDUFS5O43920 106 aa10.92□□□□□ -0.66
TRAF3-203ENST00000392745 SPAG11AQ6PDA7 123 aa10.92□□□□□ -0.66
TRAF3-203ENST00000392745 IGHV6-1A0A0B4J1U7 121 aa10.91□□□□□ -0.66
TRAF3-203ENST00000392745 LRP1BQ9NZR2 4599 aa10.9□□□□□ -0.67
TRAF3-203ENST00000392745 LINC00483Q53H64 154 aa10.89□□□□□ -0.67
TRAF3-203ENST00000392745 IGLV7-43P04211 117 aa10.88□□□□□ -0.67
TRAF3-203ENST00000392745 ATP11AUNQ6ZP68 121 aa10.87□□□□□ -0.67
TRAF3-203ENST00000392745 ANAPC11Q9NYG5 84 aa10.87□□□□□ -0.67
TRAF3-203ENST00000392745 PKHD1P08F94 4074 aa10.87□□□□□ -0.67
TRAF3-203ENST00000392745 A0A1B0GVX0 72 aa10.86□□□□□ -0.67
TRAF3-203ENST00000392745 LINC01558Q9Y6Z2 57 aa10.86□□□□□ -0.67
TRAF3-203ENST00000392745 A0A087X002 238 aa10.85□□□□□ -0.67
TRAF3-203ENST00000392745 NOTCH2NLQ7Z3S9 236 aa10.85□□□□□ -0.67
TRAF3-203ENST00000392745 HRES1P13985 223 aa10.85□□□□□ -0.67
TRAF3-203ENST00000392745 ZNF706Q9Y5V0 76 aaPredicted RBP10.84□□□□□ -0.67
TRAF3-203ENST00000392745 KTN1-AS1Q86SY8 53 aa10.84□□□□□ -0.67
TRAF3-203ENST00000392745 CDC42SE1Q9NRR8 79 aa10.83□□□□□ -0.68
TRAF3-203ENST00000392745 MRPL34Q9BQ48 92 aaKnown RBP10.82□□□□□ -0.68
TRAF3-203ENST00000392745 RYR2Q92736 4967 aa10.8□□□□□ -0.68
TRAF3-203ENST00000392745 KMT2CQ8NEZ4 4911 aaKnown RBP10.8□□□□□ -0.68
TRAF3-203ENST00000392745 A6NN06 94 aa10.8□□□□□ -0.68
TRAF3-203ENST00000392745 CDK2AP2O75956 126 aa10.79□□□□□ -0.68
TRAF3-203ENST00000392745 VPS13BQ7Z7G8 4022 aa10.78□□□□□ -0.68
TRAF3-203ENST00000392745 SPINK7P58062 85 aa10.78□□□□□ -0.68
TRAF3-203ENST00000392745 DYNC1H1Q14204 4646 aaKnown RBP10.73□□□□□ -0.69
TRAF3-203ENST00000392745 Q5W150 140 aa10.73□□□□□ -0.69
TRAF3-203ENST00000392745 PRR26Q8N8Z3 221 aa10.72□□□□□ -0.69
TRAF3-203ENST00000392745 RBM12B-AS1Q9P1G2 102 aa10.72□□□□□ -0.69
TRAF3-203ENST00000392745 A0A1B0GVY2 172 aa10.71□□□□□ -0.69
TRAF3-203ENST00000392745 SPINK6Q6UWN8 80 aa10.7□□□□□ -0.7
TRAF3-203ENST00000392745 KRTAP13-3Q3SY46 172 aa10.66□□□□□ -0.7
TRAF3-203ENST00000392745 C7orf65Q6ZTY9 151 aa10.61□□□□□ -0.71
TRAF3-203ENST00000392745 KRTAP13-2Q52LG2 175 aa10.59□□□□□ -0.71
TRAF3-203ENST00000392745 APOBP04114 4563 aaKnown RBP10.59□□□□□ -0.71
TRAF3-203ENST00000392745 KRTAP1-4P0C5Y4 121 aa10.59□□□□□ -0.71
TRAF3-203ENST00000392745 SSBP3-AS1Q7Z2R9 100 aa10.58□□□□□ -0.72
TRAF3-203ENST00000392745 SMR3BP02814 79 aaPredicted RBP10.57□□□□□ -0.72
TRAF3-203ENST00000392745 ACYP2P14621 99 aa10.56□□□□□ -0.72
TRAF3-203ENST00000392745 FAT1Q14517 4588 aa10.53□□□□□ -0.72
TRAF3-203ENST00000392745 RYR3Q15413 4870 aa10.53□□□□□ -0.72
TRAF3-203ENST00000392745 RETNLBQ9BQ08 111 aa10.51□□□□□ -0.73
TRAF3-203ENST00000392745 DMAC1Q96GE9 116 aa10.5□□□□□ -0.73
TRAF3-203ENST00000392745 PLA2G1BP04054 148 aaKnown RBP10.49□□□□□ -0.73
TRAF3-203ENST00000392745 C8orf87E5RJ46 101 aa10.46□□□□□ -0.74
TRAF3-203ENST00000392745 KRTAP10-4P60372 401 aaPredicted RBP10.45□□□□□ -0.74
TRAF3-203ENST00000392745 LINC00313P59037 77 aa10.43□□□□□ -0.74
TRAF3-203ENST00000392745 A0A1B0GU69 56 aa10.41□□□□□ -0.74
TRAF3-203ENST00000392745 FAM229AH3BQW9 127 aa10.4□□□□□ -0.74
TRAF3-203ENST00000392745 PRAC1Q96KF2 57 aa10.4□□□□□ -0.74
TRAF3-203ENST00000392745 TYMSOSQ8TAI1 123 aa10.39□□□□□ -0.75
TRAF3-203ENST00000392745 IGKV2-30P06310 120 aa10.39□□□□□ -0.75
TRAF3-203ENST00000392745 ADM2Q7Z4H4 148 aa10.37□□□□□ -0.75
TRAF3-203ENST00000392745 SPATA8Q6RVD6 105 aa10.32□□□□□ -0.76
TRAF3-203ENST00000392745 KRTAP16-1A8MUX0 517 aa10.3□□□□□ -0.76
TRAF3-203ENST00000392745 C4orf48Q5BLP8 95 aa10.3□□□□□ -0.76
TRAF3-203ENST00000392745 HSPG2P98160 4391 aa10.28□□□□□ -0.76
TRAF3-203ENST00000392745 IGKV2D-30A0A075B6S6 120 aa10.28□□□□□ -0.76
TRAF3-203ENST00000392745 SPINK1P00995 79 aa10.27□□□□□ -0.77
TRAF3-203ENST00000392745 MIR22HGQ0VDD5 57 aa10.27□□□□□ -0.77
TRAF3-203ENST00000392745 LINC00304Q8N9R0 145 aa10.25□□□□□ -0.77
TRAF3-203ENST00000392745 UQCR11O14957 56 aa10.25□□□□□ -0.77
TRAF3-203ENST00000392745 PKHD1L1Q86WI1 4243 aa10.24□□□□□ -0.77
TRAF3-203ENST00000392745 RYR1P21817 5038 aa10.24□□□□□ -0.77
TRAF3-203ENST00000392745 KRTAP17-1Q9BYP8 105 aa10.17□□□□□ -0.78
TRAF3-203ENST00000392745 RPS29P62273 56 aaKnown RBP10.16□□□□□ -0.78
TRAF3-203ENST00000392745 Q5VSD8 79 aa10.16□□□□□ -0.78
TRAF3-203ENST00000392745 KIAA1109Q2LD37 5005 aa10.15□□□□□ -0.78
TRAF3-203ENST00000392745 LRP1Q07954 4544 aaKnown RBP10.15□□□□□ -0.78
TRAF3-203ENST00000392745 EPPK1P58107 5090 aaKnown RBP10.15□□□□□ -0.79
TRAF3-203ENST00000392745 LINC01554Q52M75 96 aa10.1□□□□□ -0.79
TRAF3-203ENST00000392745 Q8N1X5 172 aa10.08□□□□□ -0.8
TRAF3-203ENST00000392745 TNXBP22105 4242 aa10.08□□□□□ -0.8
TRAF3-203ENST00000392745 FLG2Q5D862 2391 aaPredicted RBP10.03□□□□□ -0.8
TRAF3-203ENST00000392745 CSAG1Q6PB30 78 aa10.02□□□□□ -0.8
TRAF3-203ENST00000392745 KRTAP10-8P60410 259 aa10.01□□□□□ -0.81
TRAF3-203ENST00000392745 FAT3Q8TDW7 4589 aa10□□□□□ -0.81
TRAF3-203ENST00000392745 MYCBP2O75592 4640 aa9.94□□□□□ -0.82
TRAF3-203ENST00000392745 C9orf92A6NGG3 77 aa9.92□□□□□ -0.82
TRAF3-203ENST00000392745 DMBT1Q9UGM3 2413 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms