RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 A0A1B0GVX0 72 aa10.61□□□□□ -0.71
ACTN4-202ENST00000390009 hDV103S1A0JD37 113 aa10.61□□□□□ -0.71
ACTN4-202ENST00000390009 BRK1Q8WUW1 75 aa10.61□□□□□ -0.71
ACTN4-202ENST00000390009 IGHV6-1A0A0B4J1U7 121 aa10.6□□□□□ -0.71
ACTN4-202ENST00000390009 C8orf17Q9NRJ1 99 aa10.6□□□□□ -0.71
ACTN4-202ENST00000390009 SPINK6Q6UWN8 80 aa10.59□□□□□ -0.71
ACTN4-202ENST00000390009 KMT2CQ8NEZ4 4911 aaKnown RBP10.59□□□□□ -0.71
ACTN4-202ENST00000390009 ASB16-AS1Q495Z4 193 aa10.57□□□□□ -0.72
ACTN4-202ENST00000390009 PLA2G1BP04054 148 aaKnown RBP10.56□□□□□ -0.72
ACTN4-202ENST00000390009 SMR3BP02814 79 aaPredicted RBP10.55□□□□□ -0.72
ACTN4-202ENST00000390009 ZCCHC13Q8WW36 166 aaKnown RBP10.55□□□□□ -0.72
ACTN4-202ENST00000390009 APOBP04114 4563 aaKnown RBP10.52□□□□□ -0.72
ACTN4-202ENST00000390009 MP68P56378 58 aa10.52□□□□□ -0.72
ACTN4-202ENST00000390009 NOTCH2NLQ7Z3S9 236 aa10.52□□□□□ -0.73
ACTN4-202ENST00000390009 H0Y9P7 68 aa10.49□□□□□ -0.73
ACTN4-202ENST00000390009 TYMSOSQ8TAI1 123 aa10.49□□□□□ -0.73
ACTN4-202ENST00000390009 C1orf64Q8NEQ6 169 aa10.49□□□□□ -0.73
ACTN4-202ENST00000390009 LINC00208Q96KT6 92 aa10.48□□□□□ -0.73
ACTN4-202ENST00000390009 MRPL34Q9BQ48 92 aaKnown RBP10.48□□□□□ -0.73
ACTN4-202ENST00000390009 C1orf195Q5TG92 126 aa10.46□□□□□ -0.73
ACTN4-202ENST00000390009 TP53AIP1Q9HCN2 124 aa10.46□□□□□ -0.73
ACTN4-202ENST00000390009 LIMD2Q9BT23 127 aa10.46□□□□□ -0.74
ACTN4-202ENST00000390009 TRAV22A0A0B4J277 110 aa10.45□□□□□ -0.74
ACTN4-202ENST00000390009 H3BPC8 53 aa10.45□□□□□ -0.74
ACTN4-202ENST00000390009 NDUFS5O43920 106 aa10.44□□□□□ -0.74
ACTN4-202ENST00000390009 Q1T7F1 81 aa10.44□□□□□ -0.74
ACTN4-202ENST00000390009 C4orf48Q5BLP8 95 aa10.44□□□□□ -0.74
ACTN4-202ENST00000390009 FAT1Q14517 4588 aa10.44□□□□□ -0.74
ACTN4-202ENST00000390009 KRTAP10-4P60372 401 aaPredicted RBP10.43□□□□□ -0.74
ACTN4-202ENST00000390009 PRR26Q8N8Z3 221 aa10.43□□□□□ -0.74
ACTN4-202ENST00000390009 C8orf87E5RJ46 101 aa10.41□□□□□ -0.74
ACTN4-202ENST00000390009 CYP4F30PQ9H0H9 118 aa10.41□□□□□ -0.74
ACTN4-202ENST00000390009 SPINK1P00995 79 aa10.4□□□□□ -0.74
ACTN4-202ENST00000390009 PRR4Q16378 134 aa10.37□□□□□ -0.75
ACTN4-202ENST00000390009 LINC00313P59037 77 aa10.36□□□□□ -0.75
ACTN4-202ENST00000390009 LINC00304Q8N9R0 145 aa10.36□□□□□ -0.75
ACTN4-202ENST00000390009 PSPHP1O15172 72 aa10.32□□□□□ -0.76
ACTN4-202ENST00000390009 RPS29P62273 56 aaKnown RBP10.31□□□□□ -0.76
ACTN4-202ENST00000390009 SPAG11AQ6PDA7 123 aa10.31□□□□□ -0.76
ACTN4-202ENST00000390009 RYR3Q15413 4870 aa10.3□□□□□ -0.76
ACTN4-202ENST00000390009 V9GYY9 64 aa10.29□□□□□ -0.76
ACTN4-202ENST00000390009 Q5W150 140 aa10.26□□□□□ -0.77
ACTN4-202ENST00000390009 Q8N9P0 234 aaPredicted RBP10.26□□□□□ -0.77
ACTN4-202ENST00000390009 SPANXA2-OT1Q8N9U9 137 aa10.26□□□□□ -0.77
ACTN4-202ENST00000390009 PKHD1L1Q86WI1 4243 aa10.26□□□□□ -0.77
ACTN4-202ENST00000390009 KRTAP16-1A8MUX0 517 aa10.25□□□□□ -0.77
ACTN4-202ENST00000390009 KRTAP13-3Q3SY46 172 aa10.24□□□□□ -0.77
ACTN4-202ENST00000390009 FAM229AH3BQW9 127 aa10.24□□□□□ -0.77
ACTN4-202ENST00000390009 PCOTHQ58A44 107 aa10.22□□□□□ -0.77
ACTN4-202ENST00000390009 A8MUN3 132 aa10.22□□□□□ -0.77
ACTN4-202ENST00000390009 HSPG2P98160 4391 aa10.19□□□□□ -0.78
ACTN4-202ENST00000390009 LOC101927531A0A1B0GV80 90 aa10.18□□□□□ -0.78
ACTN4-202ENST00000390009 Q5VV11 94 aa10.18□□□□□ -0.78
ACTN4-202ENST00000390009 IGLV7-46A0A075B6I9 117 aa10.16□□□□□ -0.78
ACTN4-202ENST00000390009 Q5VSD8 79 aa10.16□□□□□ -0.78
ACTN4-202ENST00000390009 PMAIP1Q13794 54 aa10.15□□□□□ -0.78
ACTN4-202ENST00000390009 RETNLBQ9BQ08 111 aa10.13□□□□□ -0.79
ACTN4-202ENST00000390009 SEC61GP60059 68 aa10.13□□□□□ -0.79
ACTN4-202ENST00000390009 A8MU10 97 aa10.1□□□□□ -0.79
ACTN4-202ENST00000390009 RYR1P21817 5038 aa10.1□□□□□ -0.79
ACTN4-202ENST00000390009 PRR15LQ9BU68 103 aa10.07□□□□□ -0.8
ACTN4-202ENST00000390009 CHKB-CPT1BH3BT56 60 aa10.07□□□□□ -0.8
ACTN4-202ENST00000390009 COA5Q86WW8 74 aa10.05□□□□□ -0.8
ACTN4-202ENST00000390009 FLG2Q5D862 2391 aaPredicted RBP10.05□□□□□ -0.8
ACTN4-202ENST00000390009 LRP1Q07954 4544 aaKnown RBP10.05□□□□□ -0.8
ACTN4-202ENST00000390009 IGKV2-30P06310 120 aa10.04□□□□□ -0.8
ACTN4-202ENST00000390009 Q8N1X5 172 aa10.03□□□□□ -0.8
ACTN4-202ENST00000390009 KRTAP17-1Q9BYP8 105 aa10.03□□□□□ -0.8
ACTN4-202ENST00000390009 TNXBP22105 4242 aa10.03□□□□□ -0.8
ACTN4-202ENST00000390009 KRTAP10-8P60410 259 aa10.02□□□□□ -0.81
ACTN4-202ENST00000390009 C9orf92A6NGG3 77 aa10.01□□□□□ -0.81
ACTN4-202ENST00000390009 Q75L30 129 aa10□□□□□ -0.81
ACTN4-202ENST00000390009 KIAA1109Q2LD37 5005 aa9.98□□□□□ -0.81
ACTN4-202ENST00000390009 HRES1P13985 223 aa9.98□□□□□ -0.81
ACTN4-202ENST00000390009 IGKV2D-30A0A075B6S6 120 aa9.95□□□□□ -0.82
ACTN4-202ENST00000390009 LCA10Q71F78 164 aa9.94□□□□□ -0.82
ACTN4-202ENST00000390009 A6NED7 52 aa9.94□□□□□ -0.82
ACTN4-202ENST00000390009 C20orf166-AS1Q96NR2 134 aa9.94□□□□□ -0.82
ACTN4-202ENST00000390009 FAT3Q8TDW7 4589 aa9.93□□□□□ -0.82
ACTN4-202ENST00000390009 EPPK1P58107 5090 aaKnown RBP9.93□□□□□ -0.82
ACTN4-202ENST00000390009 A8MUU9 505 aa9.92□□□□□ -0.82
ACTN4-202ENST00000390009 SPTSSBQ8NFR3 76 aa9.91□□□□□ -0.82
ACTN4-202ENST00000390009 ATP11AUNQ6ZP68 121 aa9.89□□□□□ -0.83
ACTN4-202ENST00000390009 DMAC1Q96GE9 116 aa9.88□□□□□ -0.83
ACTN4-202ENST00000390009 LINC01558Q9Y6Z2 57 aa9.88□□□□□ -0.83
ACTN4-202ENST00000390009 KTN1-AS1Q86SY8 53 aa9.87□□□□□ -0.83
ACTN4-202ENST00000390009 ACYP2P14621 99 aa9.86□□□□□ -0.83
ACTN4-202ENST00000390009 C7orf65Q6ZTY9 151 aa9.86□□□□□ -0.83
ACTN4-202ENST00000390009 CDC42SE1Q9NRR8 79 aa9.86□□□□□ -0.83
ACTN4-202ENST00000390009 DMBT1Q9UGM3 2413 aaPredicted RBP9.85□□□□□ -0.83
ACTN4-202ENST00000390009 MT1HL1P0DM35 61 aa9.82□□□□□ -0.84
ACTN4-202ENST00000390009 MYCBP2O75592 4640 aa9.82□□□□□ -0.84
ACTN4-202ENST00000390009 A6NN06 94 aa9.81□□□□□ -0.84
ACTN4-202ENST00000390009 SPINK7P58062 85 aa9.74□□□□□ -0.85
ACTN4-202ENST00000390009 RBM12B-AS1Q9P1G2 102 aa9.7□□□□□ -0.86
ACTN4-202ENST00000390009 KRTAP4-5Q9BYR2 181 aa9.66□□□□□ -0.86
ACTN4-202ENST00000390009 XP32Q5T750 250 aa9.64□□□□□ -0.87
ACTN4-202ENST00000390009 RPL37P61927 97 aaKnown RBP9.63□□□□□ -0.87
ACTN4-202ENST00000390009 KRTAP3-1Q9BYR8 98 aa9.55□□□□□ -0.88
ACTN4-202ENST00000390009 TPRXLQ17RH7 258 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms