RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 KRTAP1-4P0C5Y4 121 aa7.22□□□□□ -1.25
SPTBN1-203ENST00000389980 A0A087WSZ3 146 aa7.22□□□□□ -1.25
SPTBN1-203ENST00000389980 KRTAP13-2Q52LG2 175 aa7.2□□□□□ -1.26
SPTBN1-203ENST00000389980 SPINK6Q6UWN8 80 aa7.19□□□□□ -1.26
SPTBN1-203ENST00000389980 CYP4F30PQ9H0H9 118 aa7.19□□□□□ -1.26
SPTBN1-203ENST00000389980 DEFB116Q30KQ4 102 aa7.19□□□□□ -1.26
SPTBN1-203ENST00000389980 PLA2G1BP04054 148 aaKnown RBP7.18□□□□□ -1.26
SPTBN1-203ENST00000389980 PKHD1L1Q86WI1 4243 aa7.18□□□□□ -1.26
SPTBN1-203ENST00000389980 CDK2AP2O75956 126 aa7.17□□□□□ -1.26
SPTBN1-203ENST00000389980 ZCCHC13Q8WW36 166 aaKnown RBP7.17□□□□□ -1.26
SPTBN1-203ENST00000389980 NDUFB1O75438 58 aa7.16□□□□□ -1.26
SPTBN1-203ENST00000389980 KRTAP17-1Q9BYP8 105 aa7.16□□□□□ -1.26
SPTBN1-203ENST00000389980 CD164Q04900 197 aa7.15□□□□□ -1.27
SPTBN1-203ENST00000389980 FAM229AH3BQW9 127 aa7.14□□□□□ -1.27
SPTBN1-203ENST00000389980 DSCR10P59022 87 aa7.14□□□□□ -1.27
SPTBN1-203ENST00000389980 C1orf64Q8NEQ6 169 aa7.14□□□□□ -1.27
SPTBN1-203ENST00000389980 Q5VSD8 79 aa7.13□□□□□ -1.27
SPTBN1-203ENST00000389980 SSBP3-AS1Q7Z2R9 100 aa7.13□□□□□ -1.27
SPTBN1-203ENST00000389980 K7EQZ3 153 aa7.13□□□□□ -1.27
SPTBN1-203ENST00000389980 PRR26Q8N8Z3 221 aa7.13□□□□□ -1.27
SPTBN1-203ENST00000389980 LRP1Q07954 4544 aaKnown RBP7.12□□□□□ -1.27
SPTBN1-203ENST00000389980 TRAV22A0A0B4J277 110 aa7.1□□□□□ -1.27
SPTBN1-203ENST00000389980 TYMSOSQ8TAI1 123 aa7.1□□□□□ -1.27
SPTBN1-203ENST00000389980 LINC00472Q9H8W2 130 aa7.09□□□□□ -1.27
SPTBN1-203ENST00000389980 FLG2Q5D862 2391 aaPredicted RBP7.07□□□□□ -1.28
SPTBN1-203ENST00000389980 Q96NJ1 140 aa7.07□□□□□ -1.28
SPTBN1-203ENST00000389980 LIMD2Q9BT23 127 aa7.06□□□□□ -1.28
SPTBN1-203ENST00000389980 H3BPC8 53 aa7.06□□□□□ -1.28
SPTBN1-203ENST00000389980 SPANXA2-OT1Q8N9U9 137 aa7.06□□□□□ -1.28
SPTBN1-203ENST00000389980 FAT3Q8TDW7 4589 aa7.04□□□□□ -1.28
SPTBN1-203ENST00000389980 MYCBP2O75592 4640 aa7.04□□□□□ -1.28
SPTBN1-203ENST00000389980 TNXBP22105 4242 aa7.04□□□□□ -1.28
SPTBN1-203ENST00000389980 WFDC13Q8IUB5 93 aa7.03□□□□□ -1.28
SPTBN1-203ENST00000389980 MP68P56378 58 aa7.03□□□□□ -1.28
SPTBN1-203ENST00000389980 HCG22E2RYF7 251 aa7.02□□□□□ -1.29
SPTBN1-203ENST00000389980 Q8N1X5 172 aa7.02□□□□□ -1.29
SPTBN1-203ENST00000389980 PSPHP1O15172 72 aa7.02□□□□□ -1.29
SPTBN1-203ENST00000389980 C4orf48Q5BLP8 95 aa7.02□□□□□ -1.29
SPTBN1-203ENST00000389980 NDUFS5O43920 106 aa7.01□□□□□ -1.29
SPTBN1-203ENST00000389980 LINC00304Q8N9R0 145 aa7.01□□□□□ -1.29
SPTBN1-203ENST00000389980 KTN1-AS1Q86SY8 53 aa7□□□□□ -1.29
SPTBN1-203ENST00000389980 A8MWP4 228 aa6.99□□□□□ -1.29
SPTBN1-203ENST00000389980 Q5VV11 94 aa6.99□□□□□ -1.29
SPTBN1-203ENST00000389980 ATP11AUNQ6ZP68 121 aa6.99□□□□□ -1.29
SPTBN1-203ENST00000389980 A8MUN3 132 aa6.98□□□□□ -1.29
SPTBN1-203ENST00000389980 SPINK1P00995 79 aa6.97□□□□□ -1.29
SPTBN1-203ENST00000389980 BIRC6Q9NR09 4857 aa6.97□□□□□ -1.29
SPTBN1-203ENST00000389980 ASB16-AS1Q495Z4 193 aa6.96□□□□□ -1.3
SPTBN1-203ENST00000389980 Q8N9P0 234 aaPredicted RBP6.96□□□□□ -1.3
SPTBN1-203ENST00000389980 LINC00208Q96KT6 92 aa6.95□□□□□ -1.3
SPTBN1-203ENST00000389980 KRTAP4-5Q9BYR2 181 aa6.95□□□□□ -1.3
SPTBN1-203ENST00000389980 IGHV6-1A0A0B4J1U7 121 aa6.95□□□□□ -1.3
SPTBN1-203ENST00000389980 LOC101927531A0A1B0GV80 90 aa6.95□□□□□ -1.3
SPTBN1-203ENST00000389980 Q75L30 129 aa6.95□□□□□ -1.3
SPTBN1-203ENST00000389980 CASC2Q6XLA1 102 aa6.94□□□□□ -1.3
SPTBN1-203ENST00000389980 KRTAP29-1A8MX34 341 aaPredicted RBP6.93□□□□□ -1.3
SPTBN1-203ENST00000389980 CHKB-CPT1BH3BT56 60 aa6.93□□□□□ -1.3
SPTBN1-203ENST00000389980 SPAG11AQ6PDA7 123 aa6.93□□□□□ -1.3
SPTBN1-203ENST00000389980 NOTCH2NLQ7Z3S9 236 aa6.93□□□□□ -1.3
SPTBN1-203ENST00000389980 DMBT1Q9UGM3 2413 aaPredicted RBP6.93□□□□□ -1.3
SPTBN1-203ENST00000389980 A0A1B0GVX0 72 aa6.92□□□□□ -1.3
SPTBN1-203ENST00000389980 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
SPTBN1-203ENST00000389980 ABCA13Q86UQ4 5058 aa6.91□□□□□ -1.3
SPTBN1-203ENST00000389980 MMP24-AS1A0A0U1RRL7 71 aa6.91□□□□□ -1.3
SPTBN1-203ENST00000389980 HERC2O95714 4834 aa6.89□□□□□ -1.31
SPTBN1-203ENST00000389980 RPS29P62273 56 aaKnown RBP6.89□□□□□ -1.31
SPTBN1-203ENST00000389980 C8orf17Q9NRJ1 99 aa6.89□□□□□ -1.31
SPTBN1-203ENST00000389980 RBM12B-AS1Q9P1G2 102 aa6.88□□□□□ -1.31
SPTBN1-203ENST00000389980 RETNLBQ9BQ08 111 aa6.88□□□□□ -1.31
SPTBN1-203ENST00000389980 PRR15LQ9BU68 103 aa6.88□□□□□ -1.31
SPTBN1-203ENST00000389980 CDC42SE1Q9NRR8 79 aa6.88□□□□□ -1.31
SPTBN1-203ENST00000389980 PRR4Q16378 134 aa6.87□□□□□ -1.31
SPTBN1-203ENST00000389980 A6NN06 94 aa6.86□□□□□ -1.31
SPTBN1-203ENST00000389980 H0Y9P7 68 aa6.86□□□□□ -1.31
SPTBN1-203ENST00000389980 IGLV7-46A0A075B6I9 117 aa6.85□□□□□ -1.31
SPTBN1-203ENST00000389980 MT1HL1P0DM35 61 aa6.85□□□□□ -1.31
SPTBN1-203ENST00000389980 A6NED7 52 aa6.84□□□□□ -1.32
SPTBN1-203ENST00000389980 LCA10Q71F78 164 aa6.84□□□□□ -1.32
SPTBN1-203ENST00000389980 LINC01558Q9Y6Z2 57 aa6.83□□□□□ -1.32
SPTBN1-203ENST00000389980 C7orf65Q6ZTY9 151 aa6.82□□□□□ -1.32
SPTBN1-203ENST00000389980 LINC00313P59037 77 aa6.82□□□□□ -1.32
SPTBN1-203ENST00000389980 SPTSSBQ8NFR3 76 aa6.82□□□□□ -1.32
SPTBN1-203ENST00000389980 COA5Q86WW8 74 aa6.81□□□□□ -1.32
SPTBN1-203ENST00000389980 MRPL34Q9BQ48 92 aaKnown RBP6.79□□□□□ -1.32
SPTBN1-203ENST00000389980 A8MU10 97 aa6.79□□□□□ -1.32
SPTBN1-203ENST00000389980 C8orf87E5RJ46 101 aa6.79□□□□□ -1.32
SPTBN1-203ENST00000389980 TP53AIP1Q9HCN2 124 aa6.78□□□□□ -1.32
SPTBN1-203ENST00000389980 C9orf92A6NGG3 77 aa6.76□□□□□ -1.33
SPTBN1-203ENST00000389980 KRTAP16-1A8MUX0 517 aa6.76□□□□□ -1.33
SPTBN1-203ENST00000389980 PCOTHQ58A44 107 aa6.7□□□□□ -1.34
SPTBN1-203ENST00000389980 Q5W150 140 aa6.69□□□□□ -1.34
SPTBN1-203ENST00000389980 PCLOQ9Y6V0 5065 aa6.68□□□□□ -1.34
SPTBN1-203ENST00000389980 J3QL48 77 aa6.65□□□□□ -1.34
SPTBN1-203ENST00000389980 KRTAP13-3Q3SY46 172 aa6.63□□□□□ -1.35
SPTBN1-203ENST00000389980 LPAP08519 4548 aa6.62□□□□□ -1.35
SPTBN1-203ENST00000389980 HRES1P13985 223 aa6.61□□□□□ -1.35
SPTBN1-203ENST00000389980 SPINK7P58062 85 aa6.61□□□□□ -1.35
SPTBN1-203ENST00000389980 C20orf166-AS1Q96NR2 134 aa6.6□□□□□ -1.35
SPTBN1-203ENST00000389980 A8MUU9 505 aa6.59□□□□□ -1.35
SPTBN1-203ENST00000389980 LRP2P98164 4655 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms