RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 PZPP20742 1482 aa-5.22□□□□□ -3.25
RNU6-1340P-201ENST00000384438 CFTRP13569 1480 aa-5.23□□□□□ -3.25
RNU6-1340P-201ENST00000384438 RAPGEF2Q9Y4G8 1499 aa-5.23□□□□□ -3.25
RNU6-1340P-201ENST00000384438 WFDC10BQ8IUB3 73 aa-5.23□□□□□ -3.25
RNU6-1340P-201ENST00000384438 CEP19Q96LK0 163 aa-5.23□□□□□ -3.25
RNU6-1340P-201ENST00000384438 MADDQ8WXG6 1647 aa-5.23□□□□□ -3.25
RNU6-1340P-201ENST00000384438 EPRSP07814 1512 aaKnown RBP-5.23□□□□□ -3.25
RNU6-1340P-201ENST00000384438 HFM1A2PYH4 1435 aa-5.23□□□□□ -3.25
RNU6-1340P-201ENST00000384438 SMIM27A0A1W2PRY6 76 aa-5.24□□□□□ -3.25
RNU6-1340P-201ENST00000384438 LINC00032P0C843 101 aa-5.24□□□□□ -3.25
RNU6-1340P-201ENST00000384438 PMS2P3Q13401 168 aa-5.24□□□□□ -3.25
RNU6-1340P-201ENST00000384438 FAM24BQ8N5W8 94 aa-5.24□□□□□ -3.25
RNU6-1340P-201ENST00000384438 MROH2AA6NES4 1674 aa-5.24□□□□□ -3.25
RNU6-1340P-201ENST00000384438 A0A096LNI7 61 aa-5.25□□□□□ -3.25
RNU6-1340P-201ENST00000384438 CCDC32Q9BV29 185 aa-5.25□□□□□ -3.25
RNU6-1340P-201ENST00000384438 GUCA1AP43080 201 aaPredicted RBP-5.26□□□□□ -3.25
RNU6-1340P-201ENST00000384438 UBL5Q9BZL1 73 aa-5.26□□□□□ -3.25
RNU6-1340P-201ENST00000384438 NAIPQ13075 1403 aa-5.26□□□□□ -3.25
RNU6-1340P-201ENST00000384438 NDUFB1O75438 58 aa-5.27□□□□□ -3.25
RNU6-1340P-201ENST00000384438 DEFB131AP59861 70 aa-5.27□□□□□ -3.25
RNU6-1340P-201ENST00000384438 PLGLAQ15195 96 aa-5.27□□□□□ -3.25
RNU6-1340P-201ENST00000384438 NKIRAS1Q9NYS0 192 aa-5.27□□□□□ -3.25
RNU6-1340P-201ENST00000384438 HSPB11Q9Y547 144 aa-5.27□□□□□ -3.25
RNU6-1340P-201ENST00000384438 DUOX2Q9NRD8 1548 aa-5.28□□□□□ -3.25
RNU6-1340P-201ENST00000384438 MPC2O95563 127 aa-5.28□□□□□ -3.25
RNU6-1340P-201ENST00000384438 CYB5AP00167 134 aa-5.28□□□□□ -3.25
RNU6-1340P-201ENST00000384438 ETDBQ3ZM63 59 aa-5.28□□□□□ -3.25
RNU6-1340P-201ENST00000384438 C8orf59Q8N0T1 100 aaPredicted RBP-5.28□□□□□ -3.25
RNU6-1340P-201ENST00000384438 DEFB124Q8NES8 71 aa-5.29□□□□□ -3.26
RNU6-1340P-201ENST00000384438 TIAM1Q13009 1591 aa-5.29□□□□□ -3.26
RNU6-1340P-201ENST00000384438 NRKQ7Z2Y5 1582 aa-5.29□□□□□ -3.26
RNU6-1340P-201ENST00000384438 A0A1W2PRE2 83 aa-5.3□□□□□ -3.26
RNU6-1340P-201ENST00000384438 DEXIO95424 95 aa-5.3□□□□□ -3.26
RNU6-1340P-201ENST00000384438 UQCRHP07919 91 aa-5.3□□□□□ -3.26
RNU6-1340P-201ENST00000384438 OR13C6PQ8NH95 151 aa-5.3□□□□□ -3.26
RNU6-1340P-201ENST00000384438 ETDCA0A1B0GVM5 59 aa-5.31□□□□□ -3.26
RNU6-1340P-201ENST00000384438 UMAD1C9J7I0 102 aa-5.32□□□□□ -3.26
RNU6-1340P-201ENST00000384438 LINC01556Q5JQF7 62 aa-5.32□□□□□ -3.26
RNU6-1340P-201ENST00000384438 CSTAP01040 98 aa-5.33□□□□□ -3.26
RNU6-1340P-201ENST00000384438 RBP2P50120 134 aa-5.33□□□□□ -3.26
RNU6-1340P-201ENST00000384438 LSM6P62312 80 aaKnown RBP-5.33□□□□□ -3.26
RNU6-1340P-201ENST00000384438 GNG3P63215 75 aa-5.34□□□□□ -3.26
RNU6-1340P-201ENST00000384438 SMIM20Q8N5G0 67 aa-5.34□□□□□ -3.26
RNU6-1340P-201ENST00000384438 hADV29S1A0JD25 119 aa-5.35□□□□□ -3.27
RNU6-1340P-201ENST00000384438 LINC00694P0DN24 101 aa-5.35□□□□□ -3.27
RNU6-1340P-201ENST00000384438 DPY30Q9C005 99 aa-5.35□□□□□ -3.27
RNU6-1340P-201ENST00000384438 ABCC6O95255 1503 aa-5.35□□□□□ -3.27
RNU6-1340P-201ENST00000384438 RALGAPBQ86X10 1494 aa-5.36□□□□□ -3.27
RNU6-1340P-201ENST00000384438 ATP5EP56381 51 aaPredicted RBP-5.36□□□□□ -3.27
RNU6-1340P-201ENST00000384438 C2orf88Q9BSF0 95 aa-5.36□□□□□ -3.27
RNU6-1340P-201ENST00000384438 LMTK2Q8IWU2 1503 aa-5.37□□□□□ -3.27
RNU6-1340P-201ENST00000384438 CATR1Q13166 79 aa-5.37□□□□□ -3.27
RNU6-1340P-201ENST00000384438 ZNF720Q7Z2F6 126 aa-5.37□□□□□ -3.27
RNU6-1340P-201ENST00000384438 TRAV36DV7A0A075B6V5 113 aa-5.38□□□□□ -3.27
RNU6-1340P-201ENST00000384438 NREPQ16612 68 aa-5.38□□□□□ -3.27
RNU6-1340P-201ENST00000384438 PDCD10Q9BUL8 212 aa-5.38□□□□□ -3.27
RNU6-1340P-201ENST00000384438 COPS9Q8WXC6 57 aa-5.39□□□□□ -3.27
RNU6-1340P-201ENST00000384438 CCDC42Q96M95 316 aa-5.39□□□□□ -3.27
RNU6-1340P-201ENST00000384438 URB2Q14146 1524 aaKnown RBP-5.39□□□□□ -3.27
RNU6-1340P-201ENST00000384438 YKT6O15498 198 aa-5.41□□□□□ -3.28
RNU6-1340P-201ENST00000384438 KDM5DQ9BY66 1539 aa-5.42□□□□□ -3.28
RNU6-1340P-201ENST00000384438 MORN2Q502X0 79 aa-5.42□□□□□ -3.28
RNU6-1340P-201ENST00000384438 TMEM35BQ8NCS4 154 aa-5.42□□□□□ -3.28
RNU6-1340P-201ENST00000384438 AIF1LQ9BQI0 150 aa-5.42□□□□□ -3.28
RNU6-1340P-201ENST00000384438 KRTDAPP60985 99 aa-5.43□□□□□ -3.28
RNU6-1340P-201ENST00000384438 GINS2Q9Y248 185 aa-5.43□□□□□ -3.28
RNU6-1340P-201ENST00000384438 AKAP12Q02952 1782 aa-5.44□□□□□ -3.28
RNU6-1340P-201ENST00000384438 PFDN1O60925 122 aa-5.44□□□□□ -3.28
RNU6-1340P-201ENST00000384438 RPP14O95059 124 aaKnown RBP-5.44□□□□□ -3.28
RNU6-1340P-201ENST00000384438 SMCO1Q147U7 214 aa-5.44□□□□□ -3.28
RNU6-1340P-201ENST00000384438 FAM9CQ8IZT9 166 aa-5.44□□□□□ -3.28
RNU6-1340P-201ENST00000384438 CCL7P80098 99 aa-5.45□□□□□ -3.28
RNU6-1340P-201ENST00000384438 SPA17Q15506 151 aa-5.45□□□□□ -3.28
RNU6-1340P-201ENST00000384438 SMIM2Q9BVW6 85 aa-5.45□□□□□ -3.28
RNU6-1340P-201ENST00000384438 NMES1Q9C002 83 aa-5.45□□□□□ -3.28
RNU6-1340P-201ENST00000384438 CCDC167Q9P0B6 97 aa-5.45□□□□□ -3.28
RNU6-1340P-201ENST00000384438 APOC2P02655 101 aa-5.46□□□□□ -3.28
RNU6-1340P-201ENST00000384438 HMGN2P05204 90 aaKnown RBP-5.46□□□□□ -3.28
RNU6-1340P-201ENST00000384438 LINC01590Q5TEZ4 76 aa-5.46□□□□□ -3.28
RNU6-1340P-201ENST00000384438 TOMM20LQ6UXN7 152 aa-5.46□□□□□ -3.28
RNU6-1340P-201ENST00000384438 PAIP2BQ9ULR5 123 aaKnown RBP-5.46□□□□□ -3.28
RNU6-1340P-201ENST00000384438 ERICH2A1L162 156 aa-5.47□□□□□ -3.29
RNU6-1340P-201ENST00000384438 H3BUT2 72 aa-5.47□□□□□ -3.29
RNU6-1340P-201ENST00000384438 DEFB114Q30KQ6 69 aa-5.47□□□□□ -3.29
RNU6-1340P-201ENST00000384438 SARNPP82979 210 aaKnown RBP-5.48□□□□□ -3.29
RNU6-1340P-201ENST00000384438 PMCHL2Q9BQD1 86 aa-5.48□□□□□ -3.29
RNU6-1340P-201ENST00000384438 PCBD2Q9H0N5 130 aa-5.48□□□□□ -3.29
RNU6-1340P-201ENST00000384438 CLTCQ00610 1675 aaKnown RBP-5.49□□□□□ -3.29
RNU6-1340P-201ENST00000384438 LINC00308Q8TCZ7 52 aa-5.49□□□□□ -3.29
RNU6-1340P-201ENST00000384438 DDX60Q8IY21 1712 aaKnown RBP-5.49□□□□□ -3.29
RNU6-1340P-201ENST00000384438 GYPAP02724 150 aa-5.5□□□□□ -3.29
RNU6-1340P-201ENST00000384438 CCDC172P0C7W6 258 aa-5.5□□□□□ -3.29
RNU6-1340P-201ENST00000384438 TPM4P67936 248 aa-5.5□□□□□ -3.29
RNU6-1340P-201ENST00000384438 SPANXCQ9NY87 97 aa-5.5□□□□□ -3.29
RNU6-1340P-201ENST00000384438 IER3IP1Q9Y5U9 82 aa-5.5□□□□□ -3.29
RNU6-1340P-201ENST00000384438 TRPM2O94759 1503 aa-5.5□□□□□ -3.29
RNU6-1340P-201ENST00000384438 K7ERU9 68 aa-5.51□□□□□ -3.29
RNU6-1340P-201ENST00000384438 J3QR89 54 aa-5.52□□□□□ -3.29
RNU6-1340P-201ENST00000384438 COPZ1P61923 177 aa-5.52□□□□□ -3.29
RNU6-1340P-201ENST00000384438 RB1CC1Q8TDY2 1594 aa-5.52□□□□□ -3.29
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms