RNA–Protein interactions for RNA: ENST00000379751.4

CENPB-201, Transcript of centromere protein B, humanhuman

APPRIS P1 BASIC

Gene CENPB, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPB-201ENST00000379751 FAT1Q14517 4588 aa12.36□□□□□ -0.43
CENPB-201ENST00000379751 CASC2Q6XLA1 102 aa12.35□□□□□ -0.43
CENPB-201ENST00000379751 KRTAP10-4P60372 401 aaPredicted RBP12.33□□□□□ -0.43
CENPB-201ENST00000379751 IGHV6-1A0A0B4J1U7 121 aa12.33□□□□□ -0.44
CENPB-201ENST00000379751 PRR26Q8N8Z3 221 aa12.33□□□□□ -0.44
CENPB-201ENST00000379751 PRO0628Q9UI54 55 aa12.32□□□□□ -0.44
CENPB-201ENST00000379751 TMEM254Q8TBM7 123 aa12.31□□□□□ -0.44
CENPB-201ENST00000379751 SMIM26A0A096LP01 95 aa12.3□□□□□ -0.44
CENPB-201ENST00000379751 KRTAP29-1A8MX34 341 aaPredicted RBP12.3□□□□□ -0.44
CENPB-201ENST00000379751 C4orf48Q5BLP8 95 aa12.3□□□□□ -0.44
CENPB-201ENST00000379751 MMP24-AS1A0A0U1RRL7 71 aa12.29□□□□□ -0.44
CENPB-201ENST00000379751 A0A1B0GVX0 72 aa12.29□□□□□ -0.44
CENPB-201ENST00000379751 hDV103S1A0JD37 113 aa12.26□□□□□ -0.45
CENPB-201ENST00000379751 ASB16-AS1Q495Z4 193 aa12.25□□□□□ -0.45
CENPB-201ENST00000379751 C8orf17Q9NRJ1 99 aa12.25□□□□□ -0.45
CENPB-201ENST00000379751 LIMD2Q9BT23 127 aa12.24□□□□□ -0.45
CENPB-201ENST00000379751 FAM229AH3BQW9 127 aa12.24□□□□□ -0.45
CENPB-201ENST00000379751 C1orf195Q5TG92 126 aa12.21□□□□□ -0.46
CENPB-201ENST00000379751 LINC00304Q8N9R0 145 aa12.2□□□□□ -0.46
CENPB-201ENST00000379751 SPINK1P00995 79 aa12.2□□□□□ -0.46
CENPB-201ENST00000379751 PRR4Q16378 134 aa12.2□□□□□ -0.46
CENPB-201ENST00000379751 NOTCH2NLQ7Z3S9 236 aa12.2□□□□□ -0.46
CENPB-201ENST00000379751 Q5VSD8 79 aa12.16□□□□□ -0.46
CENPB-201ENST00000379751 NDUFS5O43920 106 aa12.13□□□□□ -0.47
CENPB-201ENST00000379751 NDUFC1O43677 76 aa12.12□□□□□ -0.47
CENPB-201ENST00000379751 SPAG11AQ6PDA7 123 aa12.11□□□□□ -0.47
CENPB-201ENST00000379751 MRPL34Q9BQ48 92 aaKnown RBP12.11□□□□□ -0.47
CENPB-201ENST00000379751 HSPG2P98160 4391 aa12.09□□□□□ -0.47
CENPB-201ENST00000379751 MP68P56378 58 aa12.08□□□□□ -0.48
CENPB-201ENST00000379751 C8orf87E5RJ46 101 aa12.06□□□□□ -0.48
CENPB-201ENST00000379751 H0Y9P7 68 aa12.06□□□□□ -0.48
CENPB-201ENST00000379751 LINC00313P59037 77 aa12.06□□□□□ -0.48
CENPB-201ENST00000379751 RPS29P62273 56 aaKnown RBP12.05□□□□□ -0.48
CENPB-201ENST00000379751 PSPHP1O15172 72 aa12.04□□□□□ -0.48
CENPB-201ENST00000379751 LINC00208Q96KT6 92 aa12.03□□□□□ -0.48
CENPB-201ENST00000379751 TP53AIP1Q9HCN2 124 aa12.03□□□□□ -0.48
CENPB-201ENST00000379751 TRAV22A0A0B4J277 110 aa12.02□□□□□ -0.49
CENPB-201ENST00000379751 RYR1P21817 5038 aa12□□□□□ -0.49
CENPB-201ENST00000379751 ATP5EP56381 51 aaPredicted RBP12□□□□□ -0.49
CENPB-201ENST00000379751 ZCCHC13Q8WW36 166 aaKnown RBP11.99□□□□□ -0.49
CENPB-201ENST00000379751 KIAA1109Q2LD37 5005 aa11.98□□□□□ -0.49
CENPB-201ENST00000379751 KRTAP17-1Q9BYP8 105 aa11.98□□□□□ -0.49
CENPB-201ENST00000379751 C1orf64Q8NEQ6 169 aa11.98□□□□□ -0.49
CENPB-201ENST00000379751 A8MU10 97 aa11.95□□□□□ -0.5
CENPB-201ENST00000379751 EPPK1P58107 5090 aaKnown RBP11.95□□□□□ -0.5
CENPB-201ENST00000379751 H3BPC8 53 aa11.92□□□□□ -0.5
CENPB-201ENST00000379751 FLG2Q5D862 2391 aaPredicted RBP11.92□□□□□ -0.5
CENPB-201ENST00000379751 PKHD1L1Q86WI1 4243 aa11.91□□□□□ -0.5
CENPB-201ENST00000379751 V9GYY9 64 aa11.91□□□□□ -0.5
CENPB-201ENST00000379751 Q8N1X5 172 aa11.9□□□□□ -0.5
CENPB-201ENST00000379751 RETNLBQ9BQ08 111 aa11.9□□□□□ -0.5
CENPB-201ENST00000379751 LRP1Q07954 4544 aaKnown RBP11.9□□□□□ -0.5
CENPB-201ENST00000379751 KRTAP16-1A8MUX0 517 aa11.87□□□□□ -0.51
CENPB-201ENST00000379751 Q8N9P0 234 aaPredicted RBP11.86□□□□□ -0.51
CENPB-201ENST00000379751 KRTAP10-8P60410 259 aa11.86□□□□□ -0.51
CENPB-201ENST00000379751 Q5W150 140 aa11.86□□□□□ -0.51
CENPB-201ENST00000379751 SEC61GP60059 68 aa11.83□□□□□ -0.52
CENPB-201ENST00000379751 A8MUN3 132 aa11.82□□□□□ -0.52
CENPB-201ENST00000379751 C9orf92A6NGG3 77 aa11.79□□□□□ -0.52
CENPB-201ENST00000379751 PCOTHQ58A44 107 aa11.78□□□□□ -0.52
CENPB-201ENST00000379751 KRTAP13-3Q3SY46 172 aa11.77□□□□□ -0.53
CENPB-201ENST00000379751 DMBT1Q9UGM3 2413 aaPredicted RBP11.76□□□□□ -0.53
CENPB-201ENST00000379751 TNXBP22105 4242 aa11.75□□□□□ -0.53
CENPB-201ENST00000379751 MYCBP2O75592 4640 aa11.73□□□□□ -0.53
CENPB-201ENST00000379751 LOC101927531A0A1B0GV80 90 aa11.72□□□□□ -0.53
CENPB-201ENST00000379751 Q1T7F1 81 aa11.71□□□□□ -0.53
CENPB-201ENST00000379751 PMAIP1Q13794 54 aa11.69□□□□□ -0.54
CENPB-201ENST00000379751 FAT3Q8TDW7 4589 aa11.68□□□□□ -0.54
CENPB-201ENST00000379751 MT1HL1P0DM35 61 aa11.67□□□□□ -0.54
CENPB-201ENST00000379751 SPANXA2-OT1Q8N9U9 137 aa11.66□□□□□ -0.54
CENPB-201ENST00000379751 CYP4F30PQ9H0H9 118 aa11.65□□□□□ -0.54
CENPB-201ENST00000379751 KRTAP4-5Q9BYR2 181 aa11.64□□□□□ -0.55
CENPB-201ENST00000379751 SPTSSBQ8NFR3 76 aa11.62□□□□□ -0.55
CENPB-201ENST00000379751 CHKB-CPT1BH3BT56 60 aa11.62□□□□□ -0.55
CENPB-201ENST00000379751 Q5VV11 94 aa11.61□□□□□ -0.55
CENPB-201ENST00000379751 PRR15LQ9BU68 103 aa11.59□□□□□ -0.55
CENPB-201ENST00000379751 IGLV7-46A0A075B6I9 117 aa11.59□□□□□ -0.55
CENPB-201ENST00000379751 IGKV2D-30A0A075B6S6 120 aa11.59□□□□□ -0.55
CENPB-201ENST00000379751 IGKV2-30P06310 120 aa11.59□□□□□ -0.55
CENPB-201ENST00000379751 C20orf166-AS1Q96NR2 134 aa11.58□□□□□ -0.56
CENPB-201ENST00000379751 A8MUU9 505 aa11.56□□□□□ -0.56
CENPB-201ENST00000379751 HRES1P13985 223 aa11.5□□□□□ -0.57
CENPB-201ENST00000379751 A6NED7 52 aa11.45□□□□□ -0.58
CENPB-201ENST00000379751 C7orf65Q6ZTY9 151 aa11.45□□□□□ -0.58
CENPB-201ENST00000379751 Q75L30 129 aa11.45□□□□□ -0.58
CENPB-201ENST00000379751 LCA10Q71F78 164 aa11.44□□□□□ -0.58
CENPB-201ENST00000379751 COA5Q86WW8 74 aa11.43□□□□□ -0.58
CENPB-201ENST00000379751 XP32Q5T750 250 aa11.36□□□□□ -0.59
CENPB-201ENST00000379751 ATP11AUNQ6ZP68 121 aa11.34□□□□□ -0.59
CENPB-201ENST00000379751 ABCA13Q86UQ4 5058 aa11.33□□□□□ -0.6
CENPB-201ENST00000379751 BIRC6Q9NR09 4857 aa11.32□□□□□ -0.6
CENPB-201ENST00000379751 DMAC1Q96GE9 116 aa11.32□□□□□ -0.6
CENPB-201ENST00000379751 J3QL48 77 aa11.31□□□□□ -0.6
CENPB-201ENST00000379751 ACYP2P14621 99 aa11.31□□□□□ -0.6
CENPB-201ENST00000379751 SPINK7P58062 85 aa11.31□□□□□ -0.6
CENPB-201ENST00000379751 RPL37P61927 97 aaKnown RBP11.31□□□□□ -0.6
CENPB-201ENST00000379751 RBM12B-AS1Q9P1G2 102 aa11.28□□□□□ -0.6
CENPB-201ENST00000379751 HERC2O95714 4834 aa11.25□□□□□ -0.61
CENPB-201ENST00000379751 KTN1-AS1Q86SY8 53 aa11.25□□□□□ -0.61
CENPB-201ENST00000379751 TPRXLQ17RH7 258 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms