RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 Q5XG85 94 aa8.68□□□□□ -1.02
SNX2-201ENST00000379516 NOTCH2NLQ7Z3S9 236 aa8.68□□□□□ -1.02
SNX2-201ENST00000379516 PRR26Q8N8Z3 221 aa8.68□□□□□ -1.02
SNX2-201ENST00000379516 KRTAP10-4P60372 401 aaPredicted RBP8.67□□□□□ -1.02
SNX2-201ENST00000379516 FAM236DA0A1B0GTK5 79 aa8.66□□□□□ -1.02
SNX2-201ENST00000379516 FAM236CP0DP71 79 aa8.66□□□□□ -1.02
SNX2-201ENST00000379516 LIMD2Q9BT23 127 aa8.66□□□□□ -1.02
SNX2-201ENST00000379516 MP68P56378 58 aa8.66□□□□□ -1.02
SNX2-201ENST00000379516 C1orf195Q5TG92 126 aa8.66□□□□□ -1.02
SNX2-201ENST00000379516 RYR3Q15413 4870 aa8.64□□□□□ -1.03
SNX2-201ENST00000379516 ZCCHC13Q8WW36 166 aaKnown RBP8.64□□□□□ -1.03
SNX2-201ENST00000379516 MRPL34Q9BQ48 92 aaKnown RBP8.64□□□□□ -1.03
SNX2-201ENST00000379516 H0Y9P7 68 aa8.63□□□□□ -1.03
SNX2-201ENST00000379516 NDUFS5O43920 106 aa8.63□□□□□ -1.03
SNX2-201ENST00000379516 SPINK1P00995 79 aa8.63□□□□□ -1.03
SNX2-201ENST00000379516 LINC00208Q96KT6 92 aa8.62□□□□□ -1.03
SNX2-201ENST00000379516 TP53AIP1Q9HCN2 124 aa8.61□□□□□ -1.03
SNX2-201ENST00000379516 LINC00304Q8N9R0 145 aa8.6□□□□□ -1.03
SNX2-201ENST00000379516 TRAV22A0A0B4J277 110 aa8.59□□□□□ -1.03
SNX2-201ENST00000379516 C8orf87E5RJ46 101 aa8.59□□□□□ -1.03
SNX2-201ENST00000379516 RPS28P62857 69 aaKnown RBP8.57□□□□□ -1.04
SNX2-201ENST00000379516 H3BPC8 53 aa8.57□□□□□ -1.04
SNX2-201ENST00000379516 LINC00313P59037 77 aa8.57□□□□□ -1.04
SNX2-201ENST00000379516 FAM229AH3BQW9 127 aa8.56□□□□□ -1.04
SNX2-201ENST00000379516 SPAG11AQ6PDA7 123 aa8.56□□□□□ -1.04
SNX2-201ENST00000379516 ATP5EP56381 51 aaPredicted RBP8.56□□□□□ -1.04
SNX2-201ENST00000379516 C1orf64Q8NEQ6 169 aa8.56□□□□□ -1.04
SNX2-201ENST00000379516 RPS29P62273 56 aaKnown RBP8.53□□□□□ -1.04
SNX2-201ENST00000379516 SERP1Q9Y6X1 66 aa8.51□□□□□ -1.05
SNX2-201ENST00000379516 OXTP01178 125 aa8.51□□□□□ -1.05
SNX2-201ENST00000379516 HSPG2P98160 4391 aa8.49□□□□□ -1.05
SNX2-201ENST00000379516 Q5VSD8 79 aa8.49□□□□□ -1.05
SNX2-201ENST00000379516 PKHD1L1Q86WI1 4243 aa8.48□□□□□ -1.05
SNX2-201ENST00000379516 Q5W150 140 aa8.46□□□□□ -1.06
SNX2-201ENST00000379516 PRR4Q16378 134 aa8.45□□□□□ -1.06
SNX2-201ENST00000379516 Q8N9P0 234 aaPredicted RBP8.45□□□□□ -1.06
SNX2-201ENST00000379516 KRTAP16-1A8MUX0 517 aa8.45□□□□□ -1.06
SNX2-201ENST00000379516 RYR1P21817 5038 aa8.43□□□□□ -1.06
SNX2-201ENST00000379516 PCOTHQ58A44 107 aa8.42□□□□□ -1.06
SNX2-201ENST00000379516 KRTAP13-3Q3SY46 172 aa8.41□□□□□ -1.06
SNX2-201ENST00000379516 SPANXA2-OT1Q8N9U9 137 aa8.4□□□□□ -1.06
SNX2-201ENST00000379516 RETNLBQ9BQ08 111 aa8.4□□□□□ -1.06
SNX2-201ENST00000379516 CYP4F30PQ9H0H9 118 aa8.39□□□□□ -1.07
SNX2-201ENST00000379516 LOC101927531A0A1B0GV80 90 aa8.38□□□□□ -1.07
SNX2-201ENST00000379516 KRTAP17-1Q9BYP8 105 aa8.37□□□□□ -1.07
SNX2-201ENST00000379516 LRP1Q07954 4544 aaKnown RBP8.36□□□□□ -1.07
SNX2-201ENST00000379516 Q8N1X5 172 aa8.36□□□□□ -1.07
SNX2-201ENST00000379516 IGLV7-46A0A075B6I9 117 aa8.35□□□□□ -1.07
SNX2-201ENST00000379516 KRTAP10-8P60410 259 aa8.35□□□□□ -1.07
SNX2-201ENST00000379516 KIAA1109Q2LD37 5005 aa8.34□□□□□ -1.07
SNX2-201ENST00000379516 EPPK1P58107 5090 aaKnown RBP8.34□□□□□ -1.08
SNX2-201ENST00000379516 TNXBP22105 4242 aa8.33□□□□□ -1.08
SNX2-201ENST00000379516 SMIM26A0A096LP01 95 aa8.32□□□□□ -1.08
SNX2-201ENST00000379516 C9orf92A6NGG3 77 aa8.32□□□□□ -1.08
SNX2-201ENST00000379516 FAT3Q8TDW7 4589 aa8.28□□□□□ -1.08
SNX2-201ENST00000379516 IGKV2-30P06310 120 aa8.27□□□□□ -1.08
SNX2-201ENST00000379516 FP248Q71RG6 208 aaPredicted RBP8.27□□□□□ -1.09
SNX2-201ENST00000379516 FLG2Q5D862 2391 aaPredicted RBP8.26□□□□□ -1.09
SNX2-201ENST00000379516 IGKV2D-30A0A075B6S6 120 aa8.24□□□□□ -1.09
SNX2-201ENST00000379516 HRES1P13985 223 aa8.22□□□□□ -1.09
SNX2-201ENST00000379516 C4orf26Q17RF5 130 aa8.22□□□□□ -1.09
SNX2-201ENST00000379516 C20orf166-AS1Q96NR2 134 aa8.21□□□□□ -1.09
SNX2-201ENST00000379516 A8MUU9 505 aa8.21□□□□□ -1.1
SNX2-201ENST00000379516 MPLKIPQ8TAP9 179 aa8.21□□□□□ -1.1
SNX2-201ENST00000379516 COA5Q86WW8 74 aa8.2□□□□□ -1.1
SNX2-201ENST00000379516 MYCBP2O75592 4640 aa8.19□□□□□ -1.1
SNX2-201ENST00000379516 MT1HL1P0DM35 61 aa8.18□□□□□ -1.1
SNX2-201ENST00000379516 C7orf65Q6ZTY9 151 aa8.14□□□□□ -1.11
SNX2-201ENST00000379516 DMBT1Q9UGM3 2413 aaPredicted RBP8.12□□□□□ -1.11
SNX2-201ENST00000379516 ACYP2P14621 99 aa8.11□□□□□ -1.11
SNX2-201ENST00000379516 DMAC1Q96GE9 116 aa8.11□□□□□ -1.11
SNX2-201ENST00000379516 Q75L30 129 aa8.11□□□□□ -1.11
SNX2-201ENST00000379516 Q1T7F1 81 aa8.1□□□□□ -1.11
SNX2-201ENST00000379516 KRTAP4-5Q9BYR2 181 aa8.09□□□□□ -1.11
SNX2-201ENST00000379516 V9GYY9 64 aa8.04□□□□□ -1.12
SNX2-201ENST00000379516 CHKB-CPT1BH3BT56 60 aa8.02□□□□□ -1.13
SNX2-201ENST00000379516 SPINK7P58062 85 aa8.02□□□□□ -1.13
SNX2-201ENST00000379516 ATP11AUNQ6ZP68 121 aa8.01□□□□□ -1.13
SNX2-201ENST00000379516 PSPHP1O15172 72 aa8□□□□□ -1.13
SNX2-201ENST00000379516 XP32Q5T750 250 aa8□□□□□ -1.13
SNX2-201ENST00000379516 RPL37P61927 97 aaKnown RBP7.99□□□□□ -1.13
SNX2-201ENST00000379516 A8MUN3 132 aa7.96□□□□□ -1.13
SNX2-201ENST00000379516 PRR15LQ9BU68 103 aa7.94□□□□□ -1.14
SNX2-201ENST00000379516 LINC01558Q9Y6Z2 57 aa7.92□□□□□ -1.14
SNX2-201ENST00000379516 ABCA13Q86UQ4 5058 aa7.91□□□□□ -1.14
SNX2-201ENST00000379516 Q5VV11 94 aa7.9□□□□□ -1.14
SNX2-201ENST00000379516 TPRXLQ17RH7 258 aa7.88□□□□□ -1.15
SNX2-201ENST00000379516 KRTAP3-1Q9BYR8 98 aa7.87□□□□□ -1.15
SNX2-201ENST00000379516 BIRC6Q9NR09 4857 aa7.87□□□□□ -1.15
SNX2-201ENST00000379516 J3QL48 77 aa7.85□□□□□ -1.15
SNX2-201ENST00000379516 BRK1Q8WUW1 75 aa7.85□□□□□ -1.15
SNX2-201ENST00000379516 HERC2O95714 4834 aa7.84□□□□□ -1.15
SNX2-201ENST00000379516 COX6B2Q6YFQ2 88 aa7.83□□□□□ -1.16
SNX2-201ENST00000379516 LPAP08519 4548 aa7.8□□□□□ -1.16
SNX2-201ENST00000379516 LRP2P98164 4655 aa7.77□□□□□ -1.17
SNX2-201ENST00000379516 A0A1B0GU69 56 aa7.75□□□□□ -1.17
SNX2-201ENST00000379516 SPTSSBQ8NFR3 76 aa7.75□□□□□ -1.17
SNX2-201ENST00000379516 A6NED7 52 aa7.75□□□□□ -1.17
SNX2-201ENST00000379516 PRO0628Q9UI54 55 aa7.75□□□□□ -1.17
SNX2-201ENST00000379516 A8MU10 97 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms