RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 KRTAP10-2P60368 255 aa3.89□□□□□ -1.79
CDKAL1-202ENST00000378610 Q5W150 140 aa3.89□□□□□ -1.79
CDKAL1-202ENST00000378610 DNAH8Q96JB1 4490 aa3.89□□□□□ -1.79
CDKAL1-202ENST00000378610 NAV2Q8IVL1 2488 aa3.89□□□□□ -1.79
CDKAL1-202ENST00000378610 PKD1L1Q8TDX9 2849 aa3.89□□□□□ -1.79
CDKAL1-202ENST00000378610 DNAH7Q8WXX0 4024 aa3.89□□□□□ -1.79
CDKAL1-202ENST00000378610 J3QKU1 62 aa3.88□□□□□ -1.79
CDKAL1-202ENST00000378610 ZNF861PO60384 105 aa3.88□□□□□ -1.79
CDKAL1-202ENST00000378610 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
CDKAL1-202ENST00000378610 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
CDKAL1-202ENST00000378610 PRKDCP78527 4128 aaKnown RBP3.87□□□□□ -1.79
CDKAL1-202ENST00000378610 CENPEQ02224 2701 aa3.87□□□□□ -1.79
CDKAL1-202ENST00000378610 VPS13DQ5THJ4 4388 aa3.86□□□□□ -1.79
CDKAL1-202ENST00000378610 K7EIL1 84 aa3.86□□□□□ -1.79
CDKAL1-202ENST00000378610 ROMO1P60602 79 aa3.86□□□□□ -1.79
CDKAL1-202ENST00000378610 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
CDKAL1-202ENST00000378610 HUWE1Q7Z6Z7 4374 aaKnown RBP3.86□□□□□ -1.79
CDKAL1-202ENST00000378610 A0A1B0GU69 56 aa3.86□□□□□ -1.79
CDKAL1-202ENST00000378610 UQCR11O14957 56 aa3.86□□□□□ -1.79
CDKAL1-202ENST00000378610 KRTAP10-11P60412 298 aa3.85□□□□□ -1.79
CDKAL1-202ENST00000378610 C1orf134Q5TEV5 83 aa3.85□□□□□ -1.79
CDKAL1-202ENST00000378610 CSAG1Q6PB30 78 aa3.85□□□□□ -1.79
CDKAL1-202ENST00000378610 TENM4Q6N022 2769 aa3.85□□□□□ -1.79
CDKAL1-202ENST00000378610 SRRM2Q9UQ35 2752 aaKnown RBP3.85□□□□□ -1.79
CDKAL1-202ENST00000378610 POLQO75417 2590 aa3.85□□□□□ -1.79
CDKAL1-202ENST00000378610 HELZ2Q9BYK8 2649 aaKnown RBP3.84□□□□□ -1.79
CDKAL1-202ENST00000378610 SMR3AQ99954 134 aa3.83□□□□□ -1.8
CDKAL1-202ENST00000378610 HECTD4Q9Y4D8 3996 aa3.82□□□□□ -1.8
CDKAL1-202ENST00000378610 FLNAP21333 2647 aaKnown RBP3.82□□□□□ -1.8
CDKAL1-202ENST00000378610 PANO1I0J062 215 aa3.81□□□□□ -1.8
CDKAL1-202ENST00000378610 IGLV7-43P04211 117 aa3.81□□□□□ -1.8
CDKAL1-202ENST00000378610 IGKV2-30P06310 120 aa3.81□□□□□ -1.8
CDKAL1-202ENST00000378610 HIVEP2P31629 2446 aa3.81□□□□□ -1.8
CDKAL1-202ENST00000378610 KRTAP1-5Q9BYS1 174 aa3.81□□□□□ -1.8
CDKAL1-202ENST00000378610 TENM1Q9UKZ4 2725 aa3.8□□□□□ -1.8
CDKAL1-202ENST00000378610 DNAH6Q9C0G6 4158 aa3.8□□□□□ -1.8
CDKAL1-202ENST00000378610 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
CDKAL1-202ENST00000378610 C14orf177Q52M58 125 aa3.8□□□□□ -1.8
CDKAL1-202ENST00000378610 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
CDKAL1-202ENST00000378610 TENM3Q9P273 2699 aa3.78□□□□□ -1.8
CDKAL1-202ENST00000378610 KRTAP25-1Q3LHN0 102 aa3.78□□□□□ -1.8
CDKAL1-202ENST00000378610 KRTAP24-1Q3LI83 254 aa3.78□□□□□ -1.8
CDKAL1-202ENST00000378610 DNAH17Q9UFH2 4485 aa3.78□□□□□ -1.8
CDKAL1-202ENST00000378610 SETD2Q9BYW2 2564 aaPredicted RBP3.78□□□□□ -1.81
CDKAL1-202ENST00000378610 SPACA4Q8TDM5 124 aa3.76□□□□□ -1.81
CDKAL1-202ENST00000378610 HECTD1Q9ULT8 2610 aa3.76□□□□□ -1.81
CDKAL1-202ENST00000378610 C20orf166-AS1Q96NR2 134 aa3.76□□□□□ -1.81
CDKAL1-202ENST00000378610 MYO18BQ8IUG5 2567 aa3.76□□□□□ -1.81
CDKAL1-202ENST00000378610 ABCA12Q86UK0 2595 aa3.74□□□□□ -1.81
CDKAL1-202ENST00000378610 IGKV2D-30A0A075B6S6 120 aa3.74□□□□□ -1.81
CDKAL1-202ENST00000378610 CCDC168Q8NDH2 2452 aa3.74□□□□□ -1.81
CDKAL1-202ENST00000378610 SONP18583 2426 aaKnown RBP3.74□□□□□ -1.81
CDKAL1-202ENST00000378610 TEP1Q99973 2627 aaKnown RBP3.74□□□□□ -1.81
CDKAL1-202ENST00000378610 LINC00304Q8N9R0 145 aa3.73□□□□□ -1.81
CDKAL1-202ENST00000378610 H0YAA0 97 aa3.73□□□□□ -1.81
CDKAL1-202ENST00000378610 KRTAP9-6A0A140TA67 174 aa3.73□□□□□ -1.81
CDKAL1-202ENST00000378610 LY6G6CO95867 125 aa3.73□□□□□ -1.81
CDKAL1-202ENST00000378610 Q6ZRN7 208 aaPredicted RBP3.73□□□□□ -1.81
CDKAL1-202ENST00000378610 P0C880 135 aa3.72□□□□□ -1.81
CDKAL1-202ENST00000378610 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
CDKAL1-202ENST00000378610 KMT2AQ03164 3969 aa3.71□□□□□ -1.81
CDKAL1-202ENST00000378610 Q6ZSA8 131 aa3.71□□□□□ -1.82
CDKAL1-202ENST00000378610 APLNQ9ULZ1 77 aa3.71□□□□□ -1.82
CDKAL1-202ENST00000378610 A0A1B0GU33 70 aa3.7□□□□□ -1.82
CDKAL1-202ENST00000378610 PLECQ15149 4684 aaKnown RBP3.69□□□□□ -1.82
CDKAL1-202ENST00000378610 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
CDKAL1-202ENST00000378610 XP32Q5T750 250 aa3.69□□□□□ -1.82
CDKAL1-202ENST00000378610 DNAH2Q9P225 4427 aa3.69□□□□□ -1.82
CDKAL1-202ENST00000378610 MTORP42345 2549 aa3.68□□□□□ -1.82
CDKAL1-202ENST00000378610 PSORS1C2Q9UIG4 136 aa3.68□□□□□ -1.82
CDKAL1-202ENST00000378610 MEGF8Q7Z7M0 2845 aa3.68□□□□□ -1.82
CDKAL1-202ENST00000378610 COL7A1Q02388 2944 aa3.67□□□□□ -1.82
CDKAL1-202ENST00000378610 ANAPC11Q9NYG5 84 aa3.67□□□□□ -1.82
CDKAL1-202ENST00000378610 SSBP3-AS1Q7Z2R9 100 aa3.67□□□□□ -1.82
CDKAL1-202ENST00000378610 F8P00451 2351 aa3.67□□□□□ -1.82
CDKAL1-202ENST00000378610 NSD1Q96L73 2696 aaPredicted RBP3.64□□□□□ -1.83
CDKAL1-202ENST00000378610 NBDYA0A0U1RRE5 68 aa3.64□□□□□ -1.83
CDKAL1-202ENST00000378610 DNAH11Q96DT5 4516 aa3.63□□□□□ -1.83
CDKAL1-202ENST00000378610 SPINK6Q6UWN8 80 aa3.63□□□□□ -1.83
CDKAL1-202ENST00000378610 NOTCH2Q04721 2471 aa3.62□□□□□ -1.83
CDKAL1-202ENST00000378610 NUPR2A6NF83 97 aa3.62□□□□□ -1.83
CDKAL1-202ENST00000378610 ACANP16112 2415 aa3.61□□□□□ -1.83
CDKAL1-202ENST00000378610 KRTAP9-7A8MTY7 169 aa3.61□□□□□ -1.83
CDKAL1-202ENST00000378610 H1FX-AS1Q4G0G2 97 aa3.61□□□□□ -1.83
CDKAL1-202ENST00000378610 ITPR2Q14571 2701 aa3.61□□□□□ -1.83
CDKAL1-202ENST00000378610 DNAH5Q8TE73 4624 aa3.6□□□□□ -1.83
CDKAL1-202ENST00000378610 UBE2DNLQ8IWF7 75 aa3.59□□□□□ -1.83
CDKAL1-202ENST00000378610 KRTAP13-2Q52LG2 175 aa3.59□□□□□ -1.84
CDKAL1-202ENST00000378610 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.84
CDKAL1-202ENST00000378610 A0A087WTM6 91 aa3.58□□□□□ -1.84
CDKAL1-202ENST00000378610 R4GN34 69 aa3.58□□□□□ -1.84
CDKAL1-202ENST00000378610 STARD9Q9P2P6 4700 aa3.58□□□□□ -1.84
CDKAL1-202ENST00000378610 BIRC6Q9NR09 4857 aa3.57□□□□□ -1.84
CDKAL1-202ENST00000378610 SACSQ9NZJ4 4579 aa3.57□□□□□ -1.84
CDKAL1-202ENST00000378610 PKD1P98161 4303 aa3.56□□□□□ -1.84
CDKAL1-202ENST00000378610 NBEAL1Q6ZS30 2694 aa3.56□□□□□ -1.84
CDKAL1-202ENST00000378610 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
CDKAL1-202ENST00000378610 PKHD1L1Q86WI1 4243 aa3.55□□□□□ -1.84
CDKAL1-202ENST00000378610 ATRQ13535 2644 aa3.55□□□□□ -1.84
CDKAL1-202ENST00000378610 TPRXLQ17RH7 258 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms