RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 H7BZZ5 65 aa5.06□□□□□ -1.6
CRNKL1-202ENST00000377340 ANK3Q12955 4377 aaKnown RBP5.06□□□□□ -1.6
CRNKL1-202ENST00000377340 LINC01554Q52M75 96 aa5.04□□□□□ -1.6
CRNKL1-202ENST00000377340 KRTAP7-1Q8IUC3 87 aa5.04□□□□□ -1.6
CRNKL1-202ENST00000377340 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
CRNKL1-202ENST00000377340 M0R2T5 61 aa5.03□□□□□ -1.61
CRNKL1-202ENST00000377340 SPRR1BP22528 89 aa5.01□□□□□ -1.61
CRNKL1-202ENST00000377340 Q8N1X5 172 aa5.01□□□□□ -1.61
CRNKL1-202ENST00000377340 VPS13CQ709C8 3753 aa5.01□□□□□ -1.61
CRNKL1-202ENST00000377340 ZNF469Q96JG9 3925 aaPredicted RBP5.01□□□□□ -1.61
CRNKL1-202ENST00000377340 LOC101927531A0A1B0GV80 90 aa5□□□□□ -1.61
CRNKL1-202ENST00000377340 KRTAP4-16G5E9R7 235 aaPredicted RBP5□□□□□ -1.61
CRNKL1-202ENST00000377340 K7ERS5 55 aa5□□□□□ -1.61
CRNKL1-202ENST00000377340 IGLV8-61A0A075B6I0 122 aa5□□□□□ -1.61
CRNKL1-202ENST00000377340 ACYP2P14621 99 aa4.99□□□□□ -1.61
CRNKL1-202ENST00000377340 KLKP1Q107X0 134 aa4.96□□□□□ -1.62
CRNKL1-202ENST00000377340 MEGF8Q7Z7M0 2845 aa4.95□□□□□ -1.62
CRNKL1-202ENST00000377340 H3BPC8 53 aa4.94□□□□□ -1.62
CRNKL1-202ENST00000377340 SEC61BP60468 96 aaKnown RBP4.93□□□□□ -1.62
CRNKL1-202ENST00000377340 LINC00483Q53H64 154 aa4.93□□□□□ -1.62
CRNKL1-202ENST00000377340 LINC00472Q9H8W2 130 aa4.93□□□□□ -1.62
CRNKL1-202ENST00000377340 KRTAP13-2Q52LG2 175 aa4.92□□□□□ -1.62
CRNKL1-202ENST00000377340 SPINT4Q6UDR6 99 aa4.91□□□□□ -1.62
CRNKL1-202ENST00000377340 A0A1B0GU69 56 aa4.9□□□□□ -1.63
CRNKL1-202ENST00000377340 MMP24-AS1A0A0U1RRL7 71 aa4.89□□□□□ -1.63
CRNKL1-202ENST00000377340 SPINK7P58062 85 aa4.89□□□□□ -1.63
CRNKL1-202ENST00000377340 ZCCHC13Q8WW36 166 aaKnown RBP4.88□□□□□ -1.63
CRNKL1-202ENST00000377340 CYP4F30PQ9H0H9 118 aa4.88□□□□□ -1.63
CRNKL1-202ENST00000377340 KRTAP13-1Q8IUC0 172 aa4.87□□□□□ -1.63
CRNKL1-202ENST00000377340 Q8N9P0 234 aaPredicted RBP4.87□□□□□ -1.63
CRNKL1-202ENST00000377340 DNHD1Q96M86 4753 aa4.85□□□□□ -1.63
CRNKL1-202ENST00000377340 NOTCH2NLQ7Z3S9 236 aa4.85□□□□□ -1.63
CRNKL1-202ENST00000377340 Q1T7F1 81 aa4.84□□□□□ -1.63
CRNKL1-202ENST00000377340 COA5Q86WW8 74 aa4.83□□□□□ -1.64
CRNKL1-202ENST00000377340 A8MU10 97 aa4.83□□□□□ -1.64
CRNKL1-202ENST00000377340 CDC42SE1Q9NRR8 79 aa4.83□□□□□ -1.64
CRNKL1-202ENST00000377340 HRES1P13985 223 aa4.82□□□□□ -1.64
CRNKL1-202ENST00000377340 OCR1Q9BZK8 76 aa4.81□□□□□ -1.64
CRNKL1-202ENST00000377340 A0A1B0GVY2 172 aa4.81□□□□□ -1.64
CRNKL1-202ENST00000377340 KRTAP16-1A8MUX0 517 aa4.8□□□□□ -1.64
CRNKL1-202ENST00000377340 Q5W150 140 aa4.8□□□□□ -1.64
CRNKL1-202ENST00000377340 CSAG1Q6PB30 78 aa4.8□□□□□ -1.64
CRNKL1-202ENST00000377340 KRTAP1-4P0C5Y4 121 aa4.79□□□□□ -1.64
CRNKL1-202ENST00000377340 MIR22HGQ0VDD5 57 aa4.79□□□□□ -1.64
CRNKL1-202ENST00000377340 AKAP9Q99996 3911 aa4.78□□□□□ -1.64
CRNKL1-202ENST00000377340 Q5VV11 94 aa4.78□□□□□ -1.64
CRNKL1-202ENST00000377340 A0A0D9SG42 100 aa4.76□□□□□ -1.65
CRNKL1-202ENST00000377340 LUZP6Q538Z0 58 aa4.73□□□□□ -1.65
CRNKL1-202ENST00000377340 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
CRNKL1-202ENST00000377340 RPS29P62273 56 aaKnown RBP4.72□□□□□ -1.65
CRNKL1-202ENST00000377340 S4R3F8 94 aa4.71□□□□□ -1.66
CRNKL1-202ENST00000377340 A6NN06 94 aa4.69□□□□□ -1.66
CRNKL1-202ENST00000377340 ASB16-AS1Q495Z4 193 aa4.69□□□□□ -1.66
CRNKL1-202ENST00000377340 CSMD3Q7Z407 3707 aa4.68□□□□□ -1.66
CRNKL1-202ENST00000377340 Q75L30 129 aa4.68□□□□□ -1.66
CRNKL1-202ENST00000377340 UQCR11O14957 56 aa4.67□□□□□ -1.66
CRNKL1-202ENST00000377340 KRTAP29-1A8MX34 341 aaPredicted RBP4.67□□□□□ -1.66
CRNKL1-202ENST00000377340 SPANXA2-OT1Q8N9U9 137 aa4.67□□□□□ -1.66
CRNKL1-202ENST00000377340 RPL37P61927 97 aaKnown RBP4.66□□□□□ -1.66
CRNKL1-202ENST00000377340 CRIPTQ9P021 101 aa4.65□□□□□ -1.67
CRNKL1-202ENST00000377340 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
CRNKL1-202ENST00000377340 R4GN34 69 aa4.63□□□□□ -1.67
CRNKL1-202ENST00000377340 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
CRNKL1-202ENST00000377340 XP32Q5T750 250 aa4.62□□□□□ -1.67
CRNKL1-202ENST00000377340 KRTAP10-8P60410 259 aa4.61□□□□□ -1.67
CRNKL1-202ENST00000377340 C20orf166-AS1Q96NR2 134 aa4.6□□□□□ -1.67
CRNKL1-202ENST00000377340 HUWE1Q7Z6Z7 4374 aaKnown RBP4.6□□□□□ -1.67
CRNKL1-202ENST00000377340 A0A1B0GU33 70 aa4.59□□□□□ -1.68
CRNKL1-202ENST00000377340 KRTAP4-5Q9BYR2 181 aa4.57□□□□□ -1.68
CRNKL1-202ENST00000377340 ROMO1P60602 79 aa4.57□□□□□ -1.68
CRNKL1-202ENST00000377340 H1FX-AS1Q4G0G2 97 aa4.56□□□□□ -1.68
CRNKL1-202ENST00000377340 A8MUU9 505 aa4.56□□□□□ -1.68
CRNKL1-202ENST00000377340 TPRXLQ17RH7 258 aa4.56□□□□□ -1.68
CRNKL1-202ENST00000377340 M0QZ58 72 aa4.55□□□□□ -1.68
CRNKL1-202ENST00000377340 LINC01558Q9Y6Z2 57 aa4.54□□□□□ -1.68
CRNKL1-202ENST00000377340 KRTAP13-3Q3SY46 172 aa4.53□□□□□ -1.68
CRNKL1-202ENST00000377340 DMAC1Q96GE9 116 aa4.52□□□□□ -1.69
CRNKL1-202ENST00000377340 DNAH9Q9NYC9 4486 aa4.52□□□□□ -1.69
CRNKL1-202ENST00000377340 PRKDCP78527 4128 aaKnown RBP4.47□□□□□ -1.69
CRNKL1-202ENST00000377340 SPATA8Q6RVD6 105 aa4.45□□□□□ -1.7
CRNKL1-202ENST00000377340 PLAC4Q8WY50 150 aa4.43□□□□□ -1.7
CRNKL1-202ENST00000377340 MT1HL1P0DM35 61 aa4.42□□□□□ -1.7
CRNKL1-202ENST00000377340 PLECQ15149 4684 aaKnown RBP4.41□□□□□ -1.7
CRNKL1-202ENST00000377340 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
CRNKL1-202ENST00000377340 DNAH5Q8TE73 4624 aa4.39□□□□□ -1.71
CRNKL1-202ENST00000377340 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
CRNKL1-202ENST00000377340 KRTAP10-4P60372 401 aaPredicted RBP4.36□□□□□ -1.71
CRNKL1-202ENST00000377340 KIAA1109Q2LD37 5005 aa4.35□□□□□ -1.71
CRNKL1-202ENST00000377340 DNAH11Q96DT5 4516 aa4.35□□□□□ -1.71
CRNKL1-202ENST00000377340 STARD9Q9P2P6 4700 aa4.33□□□□□ -1.72
CRNKL1-202ENST00000377340 RYR1P21817 5038 aa4.33□□□□□ -1.72
CRNKL1-202ENST00000377340 FAT1Q14517 4588 aa4.32□□□□□ -1.72
CRNKL1-202ENST00000377340 DNAH1Q9P2D7 4330 aa4.29□□□□□ -1.72
CRNKL1-202ENST00000377340 ANK2Q01484 3957 aa4.27□□□□□ -1.73
CRNKL1-202ENST00000377340 RYR3Q15413 4870 aa4.25□□□□□ -1.73
CRNKL1-202ENST00000377340 DYNC1H1Q14204 4646 aaKnown RBP4.24□□□□□ -1.73
CRNKL1-202ENST00000377340 LYSTQ99698 3801 aa4.24□□□□□ -1.73
CRNKL1-202ENST00000377340 HYDINQ4G0P3 5121 aa4.23□□□□□ -1.73
CRNKL1-202ENST00000377340 DNAH10Q8IVF4 4471 aa4.22□□□□□ -1.73
CRNKL1-202ENST00000377340 LRP1BQ9NZR2 4599 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms