RNA–Protein interactions for RNA: ENST00000376300.6

CCDC93-202, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC93, Length 6,899 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-202ENST00000376300 PRR34Q9NV39 138 aa4.57□□□□□ -1.68
CCDC93-202ENST00000376300 CNBPP62633 177 aaKnown RBP4.56□□□□□ -1.68
CCDC93-202ENST00000376300 KRTAP10-2P60368 255 aa4.56□□□□□ -1.68
CCDC93-202ENST00000376300 IGLV5-37A0A075B6J1 123 aa4.55□□□□□ -1.68
CCDC93-202ENST00000376300 IGLV7-46A0A075B6I9 117 aa4.55□□□□□ -1.68
CCDC93-202ENST00000376300 A0A1B0GU33 70 aa4.55□□□□□ -1.68
CCDC93-202ENST00000376300 HRES1P13985 223 aa4.55□□□□□ -1.68
CCDC93-202ENST00000376300 COX6B2Q6YFQ2 88 aa4.53□□□□□ -1.68
CCDC93-202ENST00000376300 LINC00304Q8N9R0 145 aa4.53□□□□□ -1.68
CCDC93-202ENST00000376300 ZNF861PO60384 105 aa4.53□□□□□ -1.68
CCDC93-202ENST00000376300 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.53□□□□□ -1.68
CCDC93-202ENST00000376300 LINC01558Q9Y6Z2 57 aa4.52□□□□□ -1.69
CCDC93-202ENST00000376300 PLA2G2DQ9UNK4 145 aa4.52□□□□□ -1.69
CCDC93-202ENST00000376300 BSNQ9UPA5 3926 aa4.52□□□□□ -1.69
CCDC93-202ENST00000376300 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
CCDC93-202ENST00000376300 MEGF8Q7Z7M0 2845 aa4.51□□□□□ -1.69
CCDC93-202ENST00000376300 KRTAP10-1P60331 282 aa4.51□□□□□ -1.69
CCDC93-202ENST00000376300 Q8NDZ9 215 aa4.5□□□□□ -1.69
CCDC93-202ENST00000376300 SPRR4Q96PI1 79 aa4.5□□□□□ -1.69
CCDC93-202ENST00000376300 DNHD1Q96M86 4753 aa4.5□□□□□ -1.69
CCDC93-202ENST00000376300 Q5VSD8 79 aa4.49□□□□□ -1.69
CCDC93-202ENST00000376300 Q6ZR54 194 aa4.48□□□□□ -1.69
CCDC93-202ENST00000376300 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
CCDC93-202ENST00000376300 IGLV7-43P04211 117 aa4.47□□□□□ -1.69
CCDC93-202ENST00000376300 TLX1NBP0CAT3 122 aa4.47□□□□□ -1.69
CCDC93-202ENST00000376300 MMP24-AS1A0A0U1RRL7 71 aa4.45□□□□□ -1.7
CCDC93-202ENST00000376300 ADM2Q7Z4H4 148 aa4.44□□□□□ -1.7
CCDC93-202ENST00000376300 LINC00483Q53H64 154 aa4.44□□□□□ -1.7
CCDC93-202ENST00000376300 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
CCDC93-202ENST00000376300 A8MU10 97 aa4.43□□□□□ -1.7
CCDC93-202ENST00000376300 SPATA8Q6RVD6 105 aa4.43□□□□□ -1.7
CCDC93-202ENST00000376300 DMAC1Q96GE9 116 aa4.43□□□□□ -1.7
CCDC93-202ENST00000376300 KRTAP16-1A8MUX0 517 aa4.41□□□□□ -1.7
CCDC93-202ENST00000376300 Q5W150 140 aa4.41□□□□□ -1.7
CCDC93-202ENST00000376300 ZNF469Q96JG9 3925 aaPredicted RBP4.4□□□□□ -1.7
CCDC93-202ENST00000376300 PANO1I0J062 215 aa4.4□□□□□ -1.7
CCDC93-202ENST00000376300 ROMO1P60602 79 aa4.4□□□□□ -1.7
CCDC93-202ENST00000376300 S4R3F8 94 aa4.38□□□□□ -1.71
CCDC93-202ENST00000376300 A6NN06 94 aa4.35□□□□□ -1.71
CCDC93-202ENST00000376300 VPS13CQ709C8 3753 aa4.35□□□□□ -1.71
CCDC93-202ENST00000376300 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
CCDC93-202ENST00000376300 ANK3Q12955 4377 aaKnown RBP4.34□□□□□ -1.71
CCDC93-202ENST00000376300 Q6ZRN7 208 aaPredicted RBP4.34□□□□□ -1.71
CCDC93-202ENST00000376300 H1FX-AS1Q4G0G2 97 aa4.34□□□□□ -1.72
CCDC93-202ENST00000376300 ZCCHC13Q8WW36 166 aaKnown RBP4.34□□□□□ -1.72
CCDC93-202ENST00000376300 PLAC8Q9NZF1 115 aa4.34□□□□□ -1.72
CCDC93-202ENST00000376300 LINC00472Q9H8W2 130 aa4.33□□□□□ -1.72
CCDC93-202ENST00000376300 KRTAP26-1Q6PEX3 210 aa4.32□□□□□ -1.72
CCDC93-202ENST00000376300 Q6ZSA8 131 aa4.32□□□□□ -1.72
CCDC93-202ENST00000376300 RPL37P61927 97 aaKnown RBP4.31□□□□□ -1.72
CCDC93-202ENST00000376300 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
CCDC93-202ENST00000376300 R4GN34 69 aa4.27□□□□□ -1.73
CCDC93-202ENST00000376300 M0R2T5 61 aa4.26□□□□□ -1.73
CCDC93-202ENST00000376300 A0A087X002 238 aa4.25□□□□□ -1.73
CCDC93-202ENST00000376300 NOTCH2NLQ7Z3S9 236 aa4.25□□□□□ -1.73
CCDC93-202ENST00000376300 M0QZ58 72 aa4.25□□□□□ -1.73
CCDC93-202ENST00000376300 SPRR1AP35321 89 aa4.25□□□□□ -1.73
CCDC93-202ENST00000376300 C20orf166-AS1Q96NR2 134 aa4.22□□□□□ -1.73
CCDC93-202ENST00000376300 KRTAP29-1A8MX34 341 aaPredicted RBP4.2□□□□□ -1.74
CCDC93-202ENST00000376300 PLAC4Q8WY50 150 aa4.2□□□□□ -1.74
CCDC93-202ENST00000376300 KRTAP11-1Q8IUC1 163 aa4.2□□□□□ -1.74
CCDC93-202ENST00000376300 ASB16-AS1Q495Z4 193 aa4.19□□□□□ -1.74
CCDC93-202ENST00000376300 A8MUU9 505 aa4.17□□□□□ -1.74
CCDC93-202ENST00000376300 AKAP9Q99996 3911 aa4.16□□□□□ -1.74
CCDC93-202ENST00000376300 SPRR1BP22528 89 aa4.14□□□□□ -1.75
CCDC93-202ENST00000376300 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
CCDC93-202ENST00000376300 KRTAP4-16G5E9R7 235 aaPredicted RBP4.12□□□□□ -1.75
CCDC93-202ENST00000376300 KRTAP7-1Q8IUC3 87 aa4.11□□□□□ -1.75
CCDC93-202ENST00000376300 SEC61BP60468 96 aaKnown RBP4.1□□□□□ -1.75
CCDC93-202ENST00000376300 A0A1B0GVY2 172 aa4.09□□□□□ -1.75
CCDC93-202ENST00000376300 CSMD3Q7Z407 3707 aa4.08□□□□□ -1.76
CCDC93-202ENST00000376300 HYDINQ4G0P3 5121 aa4.07□□□□□ -1.76
CCDC93-202ENST00000376300 KRTAP13-2Q52LG2 175 aa4.05□□□□□ -1.76
CCDC93-202ENST00000376300 KIAA1109Q2LD37 5005 aa4.02□□□□□ -1.77
CCDC93-202ENST00000376300 KRTAP4-5Q9BYR2 181 aa4.02□□□□□ -1.77
CCDC93-202ENST00000376300 H0YAA0 97 aa3.96□□□□□ -1.77
CCDC93-202ENST00000376300 KRTAP1-4P0C5Y4 121 aa3.96□□□□□ -1.78
CCDC93-202ENST00000376300 PRKDCP78527 4128 aaKnown RBP3.95□□□□□ -1.78
CCDC93-202ENST00000376300 KRTAP13-1Q8IUC0 172 aa3.95□□□□□ -1.78
CCDC93-202ENST00000376300 KRTAP10-8P60410 259 aa3.94□□□□□ -1.78
CCDC93-202ENST00000376300 RYR1P21817 5038 aa3.91□□□□□ -1.78
CCDC93-202ENST00000376300 HUWE1Q7Z6Z7 4374 aaKnown RBP3.89□□□□□ -1.79
CCDC93-202ENST00000376300 DNAH9Q9NYC9 4486 aa3.89□□□□□ -1.79
CCDC93-202ENST00000376300 TNP1P09430 55 aa3.89□□□□□ -1.79
CCDC93-202ENST00000376300 RYR3Q15413 4870 aa3.88□□□□□ -1.79
CCDC93-202ENST00000376300 P0C880 135 aa3.87□□□□□ -1.79
CCDC93-202ENST00000376300 FAT1Q14517 4588 aa3.84□□□□□ -1.79
CCDC93-202ENST00000376300 DNAH5Q8TE73 4624 aa3.84□□□□□ -1.79
CCDC93-202ENST00000376300 PLECQ15149 4684 aaKnown RBP3.84□□□□□ -1.8
CCDC93-202ENST00000376300 DNAH1Q9P2D7 4330 aa3.83□□□□□ -1.8
CCDC93-202ENST00000376300 XP32Q5T750 250 aa3.82□□□□□ -1.8
CCDC93-202ENST00000376300 RPS29P62273 56 aaKnown RBP3.81□□□□□ -1.8
CCDC93-202ENST00000376300 PCLOQ9Y6V0 5065 aa3.8□□□□□ -1.8
CCDC93-202ENST00000376300 KMT2CQ8NEZ4 4911 aaKnown RBP3.8□□□□□ -1.8
CCDC93-202ENST00000376300 TPRXLQ17RH7 258 aa3.79□□□□□ -1.8
CCDC93-202ENST00000376300 DNAH11Q96DT5 4516 aa3.79□□□□□ -1.8
CCDC93-202ENST00000376300 MT1HL1P0DM35 61 aa3.78□□□□□ -1.8
CCDC93-202ENST00000376300 STARD9Q9P2P6 4700 aa3.76□□□□□ -1.81
CCDC93-202ENST00000376300 HERC2O95714 4834 aa3.76□□□□□ -1.81
CCDC93-202ENST00000376300 KRTAP13-3Q3SY46 172 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 531.2 ms