RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 Q6ZSA8 131 aa7.28□□□□□ -1.24
UBR4-203ENST00000375225 MRPL34Q9BQ48 92 aaKnown RBP7.28□□□□□ -1.24
UBR4-203ENST00000375225 NDUFS5O43920 106 aa7.27□□□□□ -1.25
UBR4-203ENST00000375225 RYR2Q92736 4967 aa7.27□□□□□ -1.25
UBR4-203ENST00000375225 DNAH11Q96DT5 4516 aa7.27□□□□□ -1.25
UBR4-203ENST00000375225 C8orf87E5RJ46 101 aa7.27□□□□□ -1.25
UBR4-203ENST00000375225 MPLKIPQ8TAP9 179 aa7.27□□□□□ -1.25
UBR4-203ENST00000375225 FAT2Q9NYQ8 4349 aa7.26□□□□□ -1.25
UBR4-203ENST00000375225 DNAH5Q8TE73 4624 aa7.26□□□□□ -1.25
UBR4-203ENST00000375225 FAM229BQ4G0N7 80 aa7.26□□□□□ -1.25
UBR4-203ENST00000375225 CIRBP-AS1Q8TBR5 109 aa7.26□□□□□ -1.25
UBR4-203ENST00000375225 Q1T7F1 81 aa7.25□□□□□ -1.25
UBR4-203ENST00000375225 ANAPC11Q9NYG5 84 aa7.25□□□□□ -1.25
UBR4-203ENST00000375225 A0A1B0GVY2 172 aa7.24□□□□□ -1.25
UBR4-203ENST00000375225 PKD1P98161 4303 aa7.24□□□□□ -1.25
UBR4-203ENST00000375225 IGLV7-46A0A075B6I9 117 aa7.22□□□□□ -1.25
UBR4-203ENST00000375225 PRR4Q16378 134 aa7.22□□□□□ -1.25
UBR4-203ENST00000375225 PRO0628Q9UI54 55 aa7.22□□□□□ -1.25
UBR4-203ENST00000375225 C1orf195Q5TG92 126 aa7.21□□□□□ -1.26
UBR4-203ENST00000375225 KMT2CQ8NEZ4 4911 aaKnown RBP7.2□□□□□ -1.26
UBR4-203ENST00000375225 LOC101927531A0A1B0GV80 90 aa7.2□□□□□ -1.26
UBR4-203ENST00000375225 SPINK6Q6UWN8 80 aa7.2□□□□□ -1.26
UBR4-203ENST00000375225 DNAH8Q96JB1 4490 aa7.2□□□□□ -1.26
UBR4-203ENST00000375225 LIMD2Q9BT23 127 aa7.19□□□□□ -1.26
UBR4-203ENST00000375225 LINC00313P59037 77 aa7.14□□□□□ -1.27
UBR4-203ENST00000375225 PCOTHQ58A44 107 aa7.14□□□□□ -1.27
UBR4-203ENST00000375225 BRK1Q8WUW1 75 aa7.14□□□□□ -1.27
UBR4-203ENST00000375225 COA5Q86WW8 74 aa7.12□□□□□ -1.27
UBR4-203ENST00000375225 FAM229AH3BQW9 127 aa7.11□□□□□ -1.27
UBR4-203ENST00000375225 A0A087X002 238 aa7.09□□□□□ -1.27
UBR4-203ENST00000375225 NOTCH2NLQ7Z3S9 236 aa7.09□□□□□ -1.27
UBR4-203ENST00000375225 SRRM2Q9UQ35 2752 aaKnown RBP7.09□□□□□ -1.27
UBR4-203ENST00000375225 KRTAP13-2Q52LG2 175 aa7.08□□□□□ -1.28
UBR4-203ENST00000375225 DYNC1H1Q14204 4646 aaKnown RBP7.08□□□□□ -1.28
UBR4-203ENST00000375225 LRP1BQ9NZR2 4599 aa7.07□□□□□ -1.28
UBR4-203ENST00000375225 RYR3Q15413 4870 aa7.07□□□□□ -1.28
UBR4-203ENST00000375225 SPINK1P00995 79 aa7.06□□□□□ -1.28
UBR4-203ENST00000375225 PSPHP1O15172 72 aa7.06□□□□□ -1.28
UBR4-203ENST00000375225 Q8N9P0 234 aaPredicted RBP7.06□□□□□ -1.28
UBR4-203ENST00000375225 TYMSOSQ8TAI1 123 aa7.06□□□□□ -1.28
UBR4-203ENST00000375225 PKHD1P08F94 4074 aa7.05□□□□□ -1.28
UBR4-203ENST00000375225 PLA2G1BP04054 148 aaKnown RBP7.04□□□□□ -1.28
UBR4-203ENST00000375225 SMR3BP02814 79 aaPredicted RBP7.03□□□□□ -1.28
UBR4-203ENST00000375225 KRTAP1-4P0C5Y4 121 aa7.03□□□□□ -1.28
UBR4-203ENST00000375225 ACYP2P14621 99 aa7.03□□□□□ -1.28
UBR4-203ENST00000375225 KRTAP13-3Q3SY46 172 aa7.03□□□□□ -1.28
UBR4-203ENST00000375225 RPS29P62273 56 aaKnown RBP7.02□□□□□ -1.29
UBR4-203ENST00000375225 SPAG11AQ6PDA7 123 aa7.02□□□□□ -1.29
UBR4-203ENST00000375225 A8MUN3 132 aa7.01□□□□□ -1.29
UBR4-203ENST00000375225 PRR15LQ9BU68 103 aa7.01□□□□□ -1.29
UBR4-203ENST00000375225 Q5W150 140 aa7□□□□□ -1.29
UBR4-203ENST00000375225 HRES1P13985 223 aa6.98□□□□□ -1.29
UBR4-203ENST00000375225 Q5VV11 94 aa6.98□□□□□ -1.29
UBR4-203ENST00000375225 Q75L30 129 aa6.98□□□□□ -1.29
UBR4-203ENST00000375225 LINC01558Q9Y6Z2 57 aa6.98□□□□□ -1.29
UBR4-203ENST00000375225 APOBP04114 4563 aaKnown RBP6.98□□□□□ -1.29
UBR4-203ENST00000375225 CHKB-CPT1BH3BT56 60 aa6.97□□□□□ -1.29
UBR4-203ENST00000375225 IGKV2-30P06310 120 aa6.97□□□□□ -1.29
UBR4-203ENST00000375225 LINC00304Q8N9R0 145 aa6.96□□□□□ -1.3
UBR4-203ENST00000375225 KRTAP16-1A8MUX0 517 aa6.94□□□□□ -1.3
UBR4-203ENST00000375225 DMAC1Q96GE9 116 aa6.94□□□□□ -1.3
UBR4-203ENST00000375225 KRTAP10-4P60372 401 aaPredicted RBP6.92□□□□□ -1.3
UBR4-203ENST00000375225 VPS13BQ7Z7G8 4022 aa6.92□□□□□ -1.3
UBR4-203ENST00000375225 H3BS24 57 aa6.91□□□□□ -1.3
UBR4-203ENST00000375225 A6NED7 52 aa6.91□□□□□ -1.3
UBR4-203ENST00000375225 Q5VSD8 79 aa6.9□□□□□ -1.31
UBR4-203ENST00000375225 RETNLBQ9BQ08 111 aa6.89□□□□□ -1.31
UBR4-203ENST00000375225 PRR26Q8N8Z3 221 aa6.87□□□□□ -1.31
UBR4-203ENST00000375225 RYR1P21817 5038 aa6.86□□□□□ -1.31
UBR4-203ENST00000375225 IGKV2D-30A0A075B6S6 120 aa6.86□□□□□ -1.31
UBR4-203ENST00000375225 C7orf65Q6ZTY9 151 aa6.85□□□□□ -1.31
UBR4-203ENST00000375225 CDC42SE1Q9NRR8 79 aa6.84□□□□□ -1.31
UBR4-203ENST00000375225 FAT1Q14517 4588 aa6.83□□□□□ -1.32
UBR4-203ENST00000375225 Q8N1X5 172 aa6.83□□□□□ -1.32
UBR4-203ENST00000375225 EPPK1P58107 5090 aaKnown RBP6.83□□□□□ -1.32
UBR4-203ENST00000375225 SEC61GP60059 68 aa6.82□□□□□ -1.32
UBR4-203ENST00000375225 ATP11AUNQ6ZP68 121 aa6.82□□□□□ -1.32
UBR4-203ENST00000375225 HSPG2P98160 4391 aa6.79□□□□□ -1.32
UBR4-203ENST00000375225 SPTSSBQ8NFR3 76 aa6.78□□□□□ -1.32
UBR4-203ENST00000375225 KIAA1109Q2LD37 5005 aa6.78□□□□□ -1.32
UBR4-203ENST00000375225 A0A1B0GU69 56 aa6.77□□□□□ -1.33
UBR4-203ENST00000375225 PKHD1L1Q86WI1 4243 aa6.76□□□□□ -1.33
UBR4-203ENST00000375225 PMAIP1Q13794 54 aa6.76□□□□□ -1.33
UBR4-203ENST00000375225 C20orf166-AS1Q96NR2 134 aa6.75□□□□□ -1.33
UBR4-203ENST00000375225 A8MUU9 505 aa6.74□□□□□ -1.33
UBR4-203ENST00000375225 LCA10Q71F78 164 aa6.74□□□□□ -1.33
UBR4-203ENST00000375225 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
UBR4-203ENST00000375225 SPINK7P58062 85 aa6.7□□□□□ -1.34
UBR4-203ENST00000375225 LCE2BO14633 110 aa6.68□□□□□ -1.34
UBR4-203ENST00000375225 KRTAP10-8P60410 259 aa6.68□□□□□ -1.34
UBR4-203ENST00000375225 C9orf92A6NGG3 77 aa6.67□□□□□ -1.34
UBR4-203ENST00000375225 UQCR11O14957 56 aa6.66□□□□□ -1.34
UBR4-203ENST00000375225 A8MU10 97 aa6.65□□□□□ -1.35
UBR4-203ENST00000375225 BIRC6Q9NR09 4857 aa6.64□□□□□ -1.35
UBR4-203ENST00000375225 A0A0A0MQY5 61 aa6.64□□□□□ -1.35
UBR4-203ENST00000375225 KTN1-AS1Q86SY8 53 aa6.63□□□□□ -1.35
UBR4-203ENST00000375225 A6NN06 94 aa6.6□□□□□ -1.35
UBR4-203ENST00000375225 MIR22HGQ0VDD5 57 aa6.6□□□□□ -1.35
UBR4-203ENST00000375225 SPATA8Q6RVD6 105 aa6.6□□□□□ -1.35
UBR4-203ENST00000375225 LCE2CQ5TA81 110 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms