RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 KRTAP11-1Q8IUC1 163 aa5.73□□□□□ -1.49
SF3A3-201ENST00000373019 DNAH10Q8IVF4 4471 aa5.73□□□□□ -1.49
SF3A3-201ENST00000373019 NOTCH2NLQ7Z3S9 236 aa5.72□□□□□ -1.49
SF3A3-201ENST00000373019 ACYP2P14621 99 aa5.72□□□□□ -1.49
SF3A3-201ENST00000373019 C1orf134Q5TEV5 83 aa5.72□□□□□ -1.49
SF3A3-201ENST00000373019 Q5W150 140 aa5.72□□□□□ -1.49
SF3A3-201ENST00000373019 ZNF861PO60384 105 aa5.71□□□□□ -1.49
SF3A3-201ENST00000373019 LY6G6CO95867 125 aa5.71□□□□□ -1.49
SF3A3-201ENST00000373019 KRTAP13-3Q3SY46 172 aa5.71□□□□□ -1.49
SF3A3-201ENST00000373019 MRPL34Q9BQ48 92 aaKnown RBP5.7□□□□□ -1.5
SF3A3-201ENST00000373019 IGHV6-1A0A0B4J1U7 121 aa5.7□□□□□ -1.5
SF3A3-201ENST00000373019 UQCR11O14957 56 aa5.7□□□□□ -1.5
SF3A3-201ENST00000373019 NUPR2A6NF83 97 aa5.69□□□□□ -1.5
SF3A3-201ENST00000373019 A0A1B0GVX0 72 aa5.69□□□□□ -1.5
SF3A3-201ENST00000373019 UBE2DNLQ8IWF7 75 aa5.68□□□□□ -1.5
SF3A3-201ENST00000373019 DNAH10OSP0CZ25 163 aa5.68□□□□□ -1.5
SF3A3-201ENST00000373019 DMAC1Q96GE9 116 aa5.68□□□□□ -1.5
SF3A3-201ENST00000373019 ROMO1P60602 79 aa5.67□□□□□ -1.5
SF3A3-201ENST00000373019 PRKDCP78527 4128 aaKnown RBP5.66□□□□□ -1.5
SF3A3-201ENST00000373019 CHTF8P0CG12 524 aa5.63□□□□□ -1.51
SF3A3-201ENST00000373019 KRTAP25-1Q3LHN0 102 aa5.6□□□□□ -1.51
SF3A3-201ENST00000373019 DNAH9Q9NYC9 4486 aa5.6□□□□□ -1.51
SF3A3-201ENST00000373019 IGLV9-49A0A0B4J1Y8 123 aa5.59□□□□□ -1.51
SF3A3-201ENST00000373019 P0C880 135 aa5.58□□□□□ -1.52
SF3A3-201ENST00000373019 KRTAP13-1Q8IUC0 172 aa5.58□□□□□ -1.52
SF3A3-201ENST00000373019 FRAS1Q86XX4 4008 aa5.56□□□□□ -1.52
SF3A3-201ENST00000373019 IGLV7-43P04211 117 aa5.56□□□□□ -1.52
SF3A3-201ENST00000373019 IGLV5-52A0A0A0MRZ9 124 aa5.55□□□□□ -1.52
SF3A3-201ENST00000373019 CDK2AP2O75956 126 aa5.55□□□□□ -1.52
SF3A3-201ENST00000373019 A8MUU9 505 aa5.55□□□□□ -1.52
SF3A3-201ENST00000373019 FLG2Q5D862 2391 aaPredicted RBP5.54□□□□□ -1.52
SF3A3-201ENST00000373019 LINC00304Q8N9R0 145 aa5.53□□□□□ -1.52
SF3A3-201ENST00000373019 CMYA5Q8N3K9 4069 aa5.51□□□□□ -1.53
SF3A3-201ENST00000373019 APLNQ9ULZ1 77 aa5.51□□□□□ -1.53
SF3A3-201ENST00000373019 LINC00483Q53H64 154 aa5.51□□□□□ -1.53
SF3A3-201ENST00000373019 DNAH8Q96JB1 4490 aa5.5□□□□□ -1.53
SF3A3-201ENST00000373019 IGKV2-30P06310 120 aa5.49□□□□□ -1.53
SF3A3-201ENST00000373019 H0YAA0 97 aa5.48□□□□□ -1.53
SF3A3-201ENST00000373019 SPINK6Q6UWN8 80 aa5.48□□□□□ -1.53
SF3A3-201ENST00000373019 PANO1I0J062 215 aa5.47□□□□□ -1.53
SF3A3-201ENST00000373019 KRTAP1-5Q9BYS1 174 aa5.47□□□□□ -1.53
SF3A3-201ENST00000373019 HUWE1Q7Z6Z7 4374 aaKnown RBP5.47□□□□□ -1.53
SF3A3-201ENST00000373019 ANAPC11Q9NYG5 84 aa5.46□□□□□ -1.53
SF3A3-201ENST00000373019 Q6ZSA8 131 aa5.46□□□□□ -1.54
SF3A3-201ENST00000373019 DNAH7Q8WXX0 4024 aa5.45□□□□□ -1.54
SF3A3-201ENST00000373019 FAM229AH3BQW9 127 aa5.44□□□□□ -1.54
SF3A3-201ENST00000373019 CRIPTQ9P021 101 aa5.43□□□□□ -1.54
SF3A3-201ENST00000373019 NBDYA0A0U1RRE5 68 aa5.43□□□□□ -1.54
SF3A3-201ENST00000373019 DNAH17Q9UFH2 4485 aa5.42□□□□□ -1.54
SF3A3-201ENST00000373019 KRTAP16-1A8MUX0 517 aa5.41□□□□□ -1.54
SF3A3-201ENST00000373019 KMT2CQ8NEZ4 4911 aaKnown RBP5.4□□□□□ -1.55
SF3A3-201ENST00000373019 DNAH3Q8TD57 4116 aa5.39□□□□□ -1.55
SF3A3-201ENST00000373019 IGKV2D-30A0A075B6S6 120 aa5.38□□□□□ -1.55
SF3A3-201ENST00000373019 SPINK1P00995 79 aa5.38□□□□□ -1.55
SF3A3-201ENST00000373019 C14orf177Q52M58 125 aa5.37□□□□□ -1.55
SF3A3-201ENST00000373019 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-201ENST00000373019 TYMSOSQ8TAI1 123 aa5.35□□□□□ -1.55
SF3A3-201ENST00000373019 STARD9Q9P2P6 4700 aa5.34□□□□□ -1.55
SF3A3-201ENST00000373019 HECTD4Q9Y4D8 3996 aa5.34□□□□□ -1.55
SF3A3-201ENST00000373019 VPS13DQ5THJ4 4388 aa5.34□□□□□ -1.55
SF3A3-201ENST00000373019 NDUFAF8A1L188 74 aa5.33□□□□□ -1.56
SF3A3-201ENST00000373019 PSORS1C2Q9UIG4 136 aa5.33□□□□□ -1.56
SF3A3-201ENST00000373019 PLECQ15149 4684 aaKnown RBP5.33□□□□□ -1.56
SF3A3-201ENST00000373019 KMT2AQ03164 3969 aa5.33□□□□□ -1.56
SF3A3-201ENST00000373019 A0A087WTM6 91 aa5.32□□□□□ -1.56
SF3A3-201ENST00000373019 CIRBP-AS1Q8TBR5 109 aa5.32□□□□□ -1.56
SF3A3-201ENST00000373019 SPACA4Q8TDM5 124 aa5.32□□□□□ -1.56
SF3A3-201ENST00000373019 SSBP3-AS1Q7Z2R9 100 aa5.31□□□□□ -1.56
SF3A3-201ENST00000373019 A0A1B0GU33 70 aa5.3□□□□□ -1.56
SF3A3-201ENST00000373019 Q8N1X5 172 aa5.3□□□□□ -1.56
SF3A3-201ENST00000373019 SMR3BP02814 79 aaPredicted RBP5.29□□□□□ -1.56
SF3A3-201ENST00000373019 C20orf166-AS1Q96NR2 134 aa5.27□□□□□ -1.57
SF3A3-201ENST00000373019 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
SF3A3-201ENST00000373019 H1FX-AS1Q4G0G2 97 aa5.27□□□□□ -1.57
SF3A3-201ENST00000373019 DMBT1Q9UGM3 2413 aaPredicted RBP5.27□□□□□ -1.57
SF3A3-201ENST00000373019 RYR3Q15413 4870 aa5.27□□□□□ -1.57
SF3A3-201ENST00000373019 TPRXLQ17RH7 258 aa5.25□□□□□ -1.57
SF3A3-201ENST00000373019 SPINT4Q6UDR6 99 aa5.25□□□□□ -1.57
SF3A3-201ENST00000373019 HYDINQ4G0P3 5121 aa5.23□□□□□ -1.57
SF3A3-201ENST00000373019 KRTAP10-2P60368 255 aa5.22□□□□□ -1.57
SF3A3-201ENST00000373019 DYNC2H1Q8NCM8 4307 aaKnown RBP5.22□□□□□ -1.57
SF3A3-201ENST00000373019 Q6ZRN7 208 aaPredicted RBP5.21□□□□□ -1.57
SF3A3-201ENST00000373019 SACSQ9NZJ4 4579 aa5.21□□□□□ -1.57
SF3A3-201ENST00000373019 J3QL48 77 aa5.2□□□□□ -1.58
SF3A3-201ENST00000373019 KRTAP3-1Q9BYR8 98 aa5.18□□□□□ -1.58
SF3A3-201ENST00000373019 K7ERS5 55 aa5.17□□□□□ -1.58
SF3A3-201ENST00000373019 COX6B2Q6YFQ2 88 aa5.17□□□□□ -1.58
SF3A3-201ENST00000373019 RYR2Q92736 4967 aa5.17□□□□□ -1.58
SF3A3-201ENST00000373019 EPPK1P58107 5090 aaKnown RBP5.16□□□□□ -1.58
SF3A3-201ENST00000373019 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
SF3A3-201ENST00000373019 DNAH2Q9P225 4427 aa5.15□□□□□ -1.58
SF3A3-201ENST00000373019 KRTAP13-2Q52LG2 175 aa5.15□□□□□ -1.59
SF3A3-201ENST00000373019 KIAA1109Q2LD37 5005 aa5.14□□□□□ -1.59
SF3A3-201ENST00000373019 DNAH11Q96DT5 4516 aa5.13□□□□□ -1.59
SF3A3-201ENST00000373019 KRTAP10-1P60331 282 aa5.12□□□□□ -1.59
SF3A3-201ENST00000373019 DNAH6Q9C0G6 4158 aa5.12□□□□□ -1.59
SF3A3-201ENST00000373019 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
SF3A3-201ENST00000373019 A0A1B0GVY2 172 aa5.1□□□□□ -1.59
SF3A3-201ENST00000373019 RPL37P61927 97 aaKnown RBP5.08□□□□□ -1.6
SF3A3-201ENST00000373019 KRTAP13-4Q3LI77 160 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms