RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 Q1T7F1 81 aa11.03□□□□□ -0.64
VEGFA-206ENST00000372077 RYR1P21817 5038 aa11.03□□□□□ -0.64
VEGFA-206ENST00000372077 hDV103S1A0JD37 113 aa11.01□□□□□ -0.65
VEGFA-206ENST00000372077 SPINK6Q6UWN8 80 aa11.01□□□□□ -0.65
VEGFA-206ENST00000372077 FAM229AH3BQW9 127 aa11.01□□□□□ -0.65
VEGFA-206ENST00000372077 ANAPC11Q9NYG5 84 aa11.01□□□□□ -0.65
VEGFA-206ENST00000372077 IGLV9-49A0A0B4J1Y8 123 aa11□□□□□ -0.65
VEGFA-206ENST00000372077 PLA2G1BP04054 148 aaKnown RBP10.99□□□□□ -0.65
VEGFA-206ENST00000372077 A8MU10 97 aa10.99□□□□□ -0.65
VEGFA-206ENST00000372077 TRAV22A0A0B4J277 110 aa10.97□□□□□ -0.65
VEGFA-206ENST00000372077 HCG22E2RYF7 251 aa10.97□□□□□ -0.65
VEGFA-206ENST00000372077 KRTAP17-1Q9BYP8 105 aa10.96□□□□□ -0.66
VEGFA-206ENST00000372077 Q5VSD8 79 aa10.95□□□□□ -0.66
VEGFA-206ENST00000372077 IGLV8-61A0A075B6I0 122 aa10.95□□□□□ -0.66
VEGFA-206ENST00000372077 C1orf64Q8NEQ6 169 aa10.95□□□□□ -0.66
VEGFA-206ENST00000372077 KTN1-AS1Q86SY8 53 aa10.94□□□□□ -0.66
VEGFA-206ENST00000372077 KRTAP1-4P0C5Y4 121 aa10.94□□□□□ -0.66
VEGFA-206ENST00000372077 KIAA1109Q2LD37 5005 aa10.93□□□□□ -0.66
VEGFA-206ENST00000372077 Q8N1X5 172 aa10.92□□□□□ -0.66
VEGFA-206ENST00000372077 LINC00208Q96KT6 92 aa10.91□□□□□ -0.66
VEGFA-206ENST00000372077 A8MUN3 132 aa10.9□□□□□ -0.66
VEGFA-206ENST00000372077 PKHD1L1Q86WI1 4243 aa10.89□□□□□ -0.67
VEGFA-206ENST00000372077 A0A087X002 238 aa10.86□□□□□ -0.67
VEGFA-206ENST00000372077 ZCCHC13Q8WW36 166 aaKnown RBP10.85□□□□□ -0.67
VEGFA-206ENST00000372077 MOBPQ13875 183 aa10.84□□□□□ -0.67
VEGFA-206ENST00000372077 SPTSSBQ8NFR3 76 aa10.84□□□□□ -0.67
VEGFA-206ENST00000372077 KRTAP13-2Q52LG2 175 aa10.84□□□□□ -0.67
VEGFA-206ENST00000372077 CASC2Q6XLA1 102 aa10.84□□□□□ -0.67
VEGFA-206ENST00000372077 BIRC6Q9NR09 4857 aa10.81□□□□□ -0.68
VEGFA-206ENST00000372077 SSBP3-AS1Q7Z2R9 100 aa10.81□□□□□ -0.68
VEGFA-206ENST00000372077 Q5VV11 94 aa10.8□□□□□ -0.68
VEGFA-206ENST00000372077 A0A1B0GW54 56 aa10.77□□□□□ -0.68
VEGFA-206ENST00000372077 H0Y9P7 68 aa10.77□□□□□ -0.68
VEGFA-206ENST00000372077 CHKB-CPT1BH3BT56 60 aa10.77□□□□□ -0.68
VEGFA-206ENST00000372077 PCOTHQ58A44 107 aa10.76□□□□□ -0.69
VEGFA-206ENST00000372077 PRR26Q8N8Z3 221 aa10.76□□□□□ -0.69
VEGFA-206ENST00000372077 NDUFS5O43920 106 aa10.75□□□□□ -0.69
VEGFA-206ENST00000372077 MP68P56378 58 aa10.75□□□□□ -0.69
VEGFA-206ENST00000372077 LINC00472Q9H8W2 130 aa10.74□□□□□ -0.69
VEGFA-206ENST00000372077 IGHV6-1A0A0B4J1U7 121 aa10.73□□□□□ -0.69
VEGFA-206ENST00000372077 TYMSOSQ8TAI1 123 aa10.73□□□□□ -0.69
VEGFA-206ENST00000372077 KRTAP29-1A8MX34 341 aaPredicted RBP10.71□□□□□ -0.69
VEGFA-206ENST00000372077 A8MWP4 228 aa10.71□□□□□ -0.7
VEGFA-206ENST00000372077 KRTAP4-5Q9BYR2 181 aa10.7□□□□□ -0.7
VEGFA-206ENST00000372077 ATP11AUNQ6ZP68 121 aa10.7□□□□□ -0.7
VEGFA-206ENST00000372077 NOTCH2NLQ7Z3S9 236 aa10.69□□□□□ -0.7
VEGFA-206ENST00000372077 C8orf87E5RJ46 101 aa10.69□□□□□ -0.7
VEGFA-206ENST00000372077 CYP4F30PQ9H0H9 118 aa10.69□□□□□ -0.7
VEGFA-206ENST00000372077 H3BS24 57 aa10.68□□□□□ -0.7
VEGFA-206ENST00000372077 A6NN06 94 aa10.67□□□□□ -0.7
VEGFA-206ENST00000372077 LCA10Q71F78 164 aa10.67□□□□□ -0.7
VEGFA-206ENST00000372077 MMP24-AS1A0A0U1RRL7 71 aa10.65□□□□□ -0.7
VEGFA-206ENST00000372077 HERC2O95714 4834 aa10.64□□□□□ -0.71
VEGFA-206ENST00000372077 PRR15LQ9BU68 103 aa10.64□□□□□ -0.71
VEGFA-206ENST00000372077 KRTAP10-8P60410 259 aa10.64□□□□□ -0.71
VEGFA-206ENST00000372077 FAT3Q8TDW7 4589 aa10.62□□□□□ -0.71
VEGFA-206ENST00000372077 NDUFB1O75438 58 aa10.62□□□□□ -0.71
VEGFA-206ENST00000372077 Q8N9P0 234 aaPredicted RBP10.62□□□□□ -0.71
VEGFA-206ENST00000372077 C7orf65Q6ZTY9 151 aa10.61□□□□□ -0.71
VEGFA-206ENST00000372077 A6NED7 52 aa10.61□□□□□ -0.71
VEGFA-206ENST00000372077 LINC00304Q8N9R0 145 aa10.61□□□□□ -0.71
VEGFA-206ENST00000372077 Q96NJ1 140 aa10.61□□□□□ -0.71
VEGFA-206ENST00000372077 LIMD2Q9BT23 127 aa10.61□□□□□ -0.71
VEGFA-206ENST00000372077 LRP1Q07954 4544 aaKnown RBP10.6□□□□□ -0.71
VEGFA-206ENST00000372077 RETNLBQ9BQ08 111 aa10.6□□□□□ -0.71
VEGFA-206ENST00000372077 SPAG11AQ6PDA7 123 aa10.59□□□□□ -0.71
VEGFA-206ENST00000372077 SPINK1P00995 79 aa10.57□□□□□ -0.72
VEGFA-206ENST00000372077 TNXBP22105 4242 aa10.55□□□□□ -0.72
VEGFA-206ENST00000372077 FLG2Q5D862 2391 aaPredicted RBP10.54□□□□□ -0.72
VEGFA-206ENST00000372077 RPS29P62273 56 aaKnown RBP10.54□□□□□ -0.72
VEGFA-206ENST00000372077 MT1HL1P0DM35 61 aa10.54□□□□□ -0.72
VEGFA-206ENST00000372077 ASB16-AS1Q495Z4 193 aa10.53□□□□□ -0.72
VEGFA-206ENST00000372077 C8orf17Q9NRJ1 99 aa10.53□□□□□ -0.72
VEGFA-206ENST00000372077 Q75L30 129 aa10.51□□□□□ -0.73
VEGFA-206ENST00000372077 CDC42SE1Q9NRR8 79 aa10.49□□□□□ -0.73
VEGFA-206ENST00000372077 MYCBP2O75592 4640 aa10.48□□□□□ -0.73
VEGFA-206ENST00000372077 COA5Q86WW8 74 aa10.47□□□□□ -0.73
VEGFA-206ENST00000372077 A0A1B0GVX0 72 aa10.46□□□□□ -0.73
VEGFA-206ENST00000372077 ABCA13Q86UQ4 5058 aa10.45□□□□□ -0.74
VEGFA-206ENST00000372077 SPANXA2-OT1Q8N9U9 137 aa10.44□□□□□ -0.74
VEGFA-206ENST00000372077 LOC101927531A0A1B0GV80 90 aa10.43□□□□□ -0.74
VEGFA-206ENST00000372077 Q5W150 140 aa10.43□□□□□ -0.74
VEGFA-206ENST00000372077 H3BPC8 53 aa10.39□□□□□ -0.75
VEGFA-206ENST00000372077 MRPL34Q9BQ48 92 aaKnown RBP10.39□□□□□ -0.75
VEGFA-206ENST00000372077 PRAC1Q96KF2 57 aa10.38□□□□□ -0.75
VEGFA-206ENST00000372077 IGLV7-46A0A075B6I9 117 aa10.37□□□□□ -0.75
VEGFA-206ENST00000372077 LINC00313P59037 77 aa10.35□□□□□ -0.75
VEGFA-206ENST00000372077 LINC01554Q52M75 96 aa10.31□□□□□ -0.76
VEGFA-206ENST00000372077 DMBT1Q9UGM3 2413 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-206ENST00000372077 J3QL48 77 aa10.29□□□□□ -0.76
VEGFA-206ENST00000372077 HRES1P13985 223 aa10.29□□□□□ -0.76
VEGFA-206ENST00000372077 SPINK7P58062 85 aa10.28□□□□□ -0.76
VEGFA-206ENST00000372077 TP53AIP1Q9HCN2 124 aa10.28□□□□□ -0.76
VEGFA-206ENST00000372077 ADM2Q7Z4H4 148 aa10.26□□□□□ -0.77
VEGFA-206ENST00000372077 LINC01558Q9Y6Z2 57 aa10.23□□□□□ -0.77
VEGFA-206ENST00000372077 IGKV2D-30A0A075B6S6 120 aa10.16□□□□□ -0.78
VEGFA-206ENST00000372077 IGKV2-30P06310 120 aa10.16□□□□□ -0.78
VEGFA-206ENST00000372077 PCLOQ9Y6V0 5065 aa10.13□□□□□ -0.79
VEGFA-206ENST00000372077 KRTAP16-1A8MUX0 517 aa10.1□□□□□ -0.79
VEGFA-206ENST00000372077 KRTAP13-3Q3SY46 172 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms