RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
TNFRSF1A-202ENST00000366159 PCP4P48539 62 aa6.88□□□□□ -1.31
TNFRSF1A-202ENST00000366159 RBM3P98179 157 aaKnown RBP6.88□□□□□ -1.31
TNFRSF1A-202ENST00000366159 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
TNFRSF1A-202ENST00000366159 IGHV6-1A0A0B4J1U7 121 aa6.87□□□□□ -1.31
TNFRSF1A-202ENST00000366159 HRES1P13985 223 aa6.87□□□□□ -1.31
TNFRSF1A-202ENST00000366159 SCGB1C2P0DMR2 95 aa6.86□□□□□ -1.31
TNFRSF1A-202ENST00000366159 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
TNFRSF1A-202ENST00000366159 A0A1B0GVX0 72 aa6.85□□□□□ -1.31
TNFRSF1A-202ENST00000366159 BAALC-AS2P0C853 105 aa6.84□□□□□ -1.31
TNFRSF1A-202ENST00000366159 DSCR8Q96T75 97 aa6.84□□□□□ -1.31
TNFRSF1A-202ENST00000366159 C8orf87E5RJ46 101 aa6.83□□□□□ -1.32
TNFRSF1A-202ENST00000366159 SMIM6P0DI80 62 aa6.82□□□□□ -1.32
TNFRSF1A-202ENST00000366159 Q6ZQT0 140 aa6.82□□□□□ -1.32
TNFRSF1A-202ENST00000366159 VPS25Q9BRG1 176 aa6.82□□□□□ -1.32
TNFRSF1A-202ENST00000366159 C9JAW5 83 aa6.81□□□□□ -1.32
TNFRSF1A-202ENST00000366159 J3KT08 172 aa6.79□□□□□ -1.32
TNFRSF1A-202ENST00000366159 MT2AP02795 61 aa6.79□□□□□ -1.32
TNFRSF1A-202ENST00000366159 RBM12B-AS1Q9P1G2 102 aa6.78□□□□□ -1.32
TNFRSF1A-202ENST00000366159 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.32
TNFRSF1A-202ENST00000366159 LOC110117498A0A087WWA1 95 aa6.76□□□□□ -1.33
TNFRSF1A-202ENST00000366159 FAM236DA0A1B0GTK5 79 aa6.76□□□□□ -1.33
TNFRSF1A-202ENST00000366159 A0A1B0GW54 56 aa6.76□□□□□ -1.33
TNFRSF1A-202ENST00000366159 FAM236CP0DP71 79 aa6.76□□□□□ -1.33
TNFRSF1A-202ENST00000366159 ZCCHC13Q8WW36 166 aaKnown RBP6.76□□□□□ -1.33
TNFRSF1A-202ENST00000366159 JMJD7-PLA2G4BH0Y9G9 81 aa6.76□□□□□ -1.33
TNFRSF1A-202ENST00000366159 ATXN8Q156A1 80 aa6.76□□□□□ -1.33
TNFRSF1A-202ENST00000366159 NAA38Q9BRA0 125 aaKnown RBP6.76□□□□□ -1.33
TNFRSF1A-202ENST00000366159 M0R143 59 aa6.75□□□□□ -1.33
TNFRSF1A-202ENST00000366159 MT1FP04733 61 aa6.74□□□□□ -1.33
TNFRSF1A-202ENST00000366159 SPINK7P58062 85 aa6.73□□□□□ -1.33
TNFRSF1A-202ENST00000366159 A8MWP4 228 aa6.72□□□□□ -1.33
TNFRSF1A-202ENST00000366159 IGKV3D-7A0A0C4DH55 119 aa6.71□□□□□ -1.34
TNFRSF1A-202ENST00000366159 NDUFB1O75438 58 aa6.71□□□□□ -1.34
TNFRSF1A-202ENST00000366159 PDE6GP18545 87 aa6.71□□□□□ -1.34
TNFRSF1A-202ENST00000366159 KRTAP9-3Q9BYQ3 159 aa6.71□□□□□ -1.34
TNFRSF1A-202ENST00000366159 C8orf17Q9NRJ1 99 aa6.71□□□□□ -1.34
TNFRSF1A-202ENST00000366159 C14orf132Q9NPU4 83 aa6.69□□□□□ -1.34
TNFRSF1A-202ENST00000366159 MTURNQ8N3F0 131 aa6.67□□□□□ -1.34
TNFRSF1A-202ENST00000366159 FCGBPQ9Y6R7 5405 aaPredicted RBP6.67□□□□□ -1.34
TNFRSF1A-202ENST00000366159 PRR15Q8IV56 129 aa6.66□□□□□ -1.34
TNFRSF1A-202ENST00000366159 KRTAP10-10P60014 251 aa6.65□□□□□ -1.35
TNFRSF1A-202ENST00000366159 Q6ZVQ6 151 aa6.65□□□□□ -1.35
TNFRSF1A-202ENST00000366159 A0A1B0GV90 55 aa6.64□□□□□ -1.35
TNFRSF1A-202ENST00000366159 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.63□□□□□ -1.35
TNFRSF1A-202ENST00000366159 NREPQ16612 68 aa6.63□□□□□ -1.35
TNFRSF1A-202ENST00000366159 LYRM7Q5U5X0 104 aa6.63□□□□□ -1.35
TNFRSF1A-202ENST00000366159 MMP24-AS1A0A0U1RRL7 71 aa6.62□□□□□ -1.35
TNFRSF1A-202ENST00000366159 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
TNFRSF1A-202ENST00000366159 WFDC13Q8IUB5 93 aa6.6□□□□□ -1.35
TNFRSF1A-202ENST00000366159 TMEM254Q8TBM7 123 aa6.6□□□□□ -1.35
TNFRSF1A-202ENST00000366159 KRTAP23-1A1A580 65 aa6.59□□□□□ -1.35
TNFRSF1A-202ENST00000366159 MRPL34Q9BQ48 92 aaKnown RBP6.59□□□□□ -1.35
TNFRSF1A-202ENST00000366159 TSTD3H0UI37 97 aa6.58□□□□□ -1.36
TNFRSF1A-202ENST00000366159 H3BT86 120 aa6.58□□□□□ -1.36
TNFRSF1A-202ENST00000366159 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
TNFRSF1A-202ENST00000366159 TAX1BP3O14907 124 aa6.57□□□□□ -1.36
TNFRSF1A-202ENST00000366159 BATFQ16520 125 aa6.57□□□□□ -1.36
TNFRSF1A-202ENST00000366159 K7EQZ3 153 aa6.56□□□□□ -1.36
TNFRSF1A-202ENST00000366159 A0A1W2PPM0 123 aa6.55□□□□□ -1.36
TNFRSF1A-202ENST00000366159 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
TNFRSF1A-202ENST00000366159 hDV103S1A0JD37 113 aa6.54□□□□□ -1.36
TNFRSF1A-202ENST00000366159 MACF1Q9UPN3 7388 aaKnown RBP6.51□□□□□ -1.37
TNFRSF1A-202ENST00000366159 BPY2O14599 106 aa6.5□□□□□ -1.37
TNFRSF1A-202ENST00000366159 Q5W150 140 aa6.5□□□□□ -1.37
TNFRSF1A-202ENST00000366159 H1FX-AS1Q4G0G2 97 aa6.49□□□□□ -1.37
TNFRSF1A-202ENST00000366159 NDUFS5O43920 106 aa6.47□□□□□ -1.37
TNFRSF1A-202ENST00000366159 SYNE2Q8WXH0 6885 aaKnown RBP6.46□□□□□ -1.37
TNFRSF1A-202ENST00000366159 KRTAP19-6Q3LI70 58 aa6.46□□□□□ -1.38
TNFRSF1A-202ENST00000366159 Q8N9L7 120 aa6.45□□□□□ -1.38
TNFRSF1A-202ENST00000366159 IGKV2D-30A0A075B6S6 120 aa6.43□□□□□ -1.38
TNFRSF1A-202ENST00000366159 IGKV2-30P06310 120 aa6.43□□□□□ -1.38
TNFRSF1A-202ENST00000366159 CASC2Q6XLA1 102 aa6.43□□□□□ -1.38
TNFRSF1A-202ENST00000366159 C7orf65Q6ZTY9 151 aa6.43□□□□□ -1.38
TNFRSF1A-202ENST00000366159 SPCS1Q9Y6A9 102 aa6.43□□□□□ -1.38
TNFRSF1A-202ENST00000366159 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
TNFRSF1A-202ENST00000366159 PRO0461Q9UI25 63 aa6.41□□□□□ -1.38
TNFRSF1A-202ENST00000366159 HCG22E2RYF7 251 aa6.4□□□□□ -1.39
TNFRSF1A-202ENST00000366159 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
TNFRSF1A-202ENST00000366159 LINC00846Q9NV44 126 aa6.39□□□□□ -1.39
TNFRSF1A-202ENST00000366159 SCGB1A1P11684 91 aa6.37□□□□□ -1.39
TNFRSF1A-202ENST00000366159 CXCL6P80162 114 aa6.37□□□□□ -1.39
TNFRSF1A-202ENST00000366159 C4orf26Q17RF5 130 aa6.36□□□□□ -1.39
TNFRSF1A-202ENST00000366159 COL5A1-AS1Q5SY13 56 aa6.33□□□□□ -1.4
TNFRSF1A-202ENST00000366159 UBL5Q9BZL1 73 aa6.33□□□□□ -1.4
TNFRSF1A-202ENST00000366159 K7EP34 96 aa6.32□□□□□ -1.4
TNFRSF1A-202ENST00000366159 KRTAP4-12Q9BQ66 201 aa6.29□□□□□ -1.4
TNFRSF1A-202ENST00000366159 K7ERU9 68 aa6.25□□□□□ -1.41
TNFRSF1A-202ENST00000366159 C5orf47Q569G3 176 aa6.25□□□□□ -1.41
TNFRSF1A-202ENST00000366159 C1orf64Q8NEQ6 169 aa6.23□□□□□ -1.41
TNFRSF1A-202ENST00000366159 TP53AIP1Q9HCN2 124 aa6.23□□□□□ -1.41
TNFRSF1A-202ENST00000366159 S4R3F8 94 aa6.22□□□□□ -1.41
TNFRSF1A-202ENST00000366159 F8W1H4 67 aa6.21□□□□□ -1.42
TNFRSF1A-202ENST00000366159 LCA10Q71F78 164 aa6.21□□□□□ -1.42
TNFRSF1A-202ENST00000366159 KRTAP6-3Q3LI67 103 aa6.19□□□□□ -1.42
TNFRSF1A-202ENST00000366159 ETDBQ3ZM63 59 aa6.19□□□□□ -1.42
TNFRSF1A-202ENST00000366159 GTF2H5Q6ZYL4 71 aa6.19□□□□□ -1.42
TNFRSF1A-202ENST00000366159 MT1BP07438 61 aa6.18□□□□□ -1.42
TNFRSF1A-202ENST00000366159 CSAG1Q6PB30 78 aa6.18□□□□□ -1.42
TNFRSF1A-202ENST00000366159 SPRR2GQ9BYE4 73 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms