RNA–Protein interactions for RNA: ENST00000365490.1

RN7SKP249-201, Transcript of RNA, 7SK small nuclear pseudogene 249, humanhuman

BASIC

Gene RN7SKP249, Length 355 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP249-201ENST00000365490 KRTAP4-6Q9BYQ5 205 aa5.42□□□□□ -1.54
RN7SKP249-201ENST00000365490 CDIP1Q9H305 208 aa5.42□□□□□ -1.54
RN7SKP249-201ENST00000365490 PRR4Q16378 134 aa5.41□□□□□ -1.54
RN7SKP249-201ENST00000365490 LINC00643Q86TS7 51 aa5.41□□□□□ -1.54
RN7SKP249-201ENST00000365490 IGKV3D-7A0A0C4DH55 119 aa5.4□□□□□ -1.54
RN7SKP249-201ENST00000365490 LCE2CQ5TA81 110 aa5.4□□□□□ -1.54
RN7SKP249-201ENST00000365490 A0A1B0GVX0 72 aa5.39□□□□□ -1.55
RN7SKP249-201ENST00000365490 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
RN7SKP249-201ENST00000365490 KRTAP13-3Q3SY46 172 aa5.39□□□□□ -1.55
RN7SKP249-201ENST00000365490 ATP5EP2Q5VTU8 51 aa5.39□□□□□ -1.55
RN7SKP249-201ENST00000365490 PRR15Q8IV56 129 aa5.39□□□□□ -1.55
RN7SKP249-201ENST00000365490 NDUFB1O75438 58 aa5.38□□□□□ -1.55
RN7SKP249-201ENST00000365490 C8orf87E5RJ46 101 aa5.36□□□□□ -1.55
RN7SKP249-201ENST00000365490 K7EQZ3 153 aa5.36□□□□□ -1.55
RN7SKP249-201ENST00000365490 NOTCH2NLQ7Z3S9 236 aa5.36□□□□□ -1.55
RN7SKP249-201ENST00000365490 HERC1Q15751 4861 aa5.36□□□□□ -1.55
RN7SKP249-201ENST00000365490 IGHV6-1A0A0B4J1U7 121 aa5.35□□□□□ -1.55
RN7SKP249-201ENST00000365490 LINC00313P59037 77 aa5.35□□□□□ -1.55
RN7SKP249-201ENST00000365490 Q8N9L7 120 aa5.35□□□□□ -1.55
RN7SKP249-201ENST00000365490 KRTAP16-1A8MUX0 517 aa5.33□□□□□ -1.56
RN7SKP249-201ENST00000365490 C8orf17Q9NRJ1 99 aa5.33□□□□□ -1.56
RN7SKP249-201ENST00000365490 MMP24-AS1A0A0U1RRL7 71 aa5.32□□□□□ -1.56
RN7SKP249-201ENST00000365490 C9orf92A6NGG3 77 aa5.32□□□□□ -1.56
RN7SKP249-201ENST00000365490 XP32Q5T750 250 aa5.3□□□□□ -1.56
RN7SKP249-201ENST00000365490 MT-ATP8P03928 68 aa5.29□□□□□ -1.56
RN7SKP249-201ENST00000365490 C20orf166-AS1Q96NR2 134 aa5.29□□□□□ -1.56
RN7SKP249-201ENST00000365490 IMUPQ9GZP8 106 aa5.29□□□□□ -1.56
RN7SKP249-201ENST00000365490 hDV103S1A0JD37 113 aa5.28□□□□□ -1.56
RN7SKP249-201ENST00000365490 A8MUU9 505 aa5.28□□□□□ -1.56
RN7SKP249-201ENST00000365490 HCG22E2RYF7 251 aa5.28□□□□□ -1.56
RN7SKP249-201ENST00000365490 LORP23490 312 aaPredicted RBP5.28□□□□□ -1.56
RN7SKP249-201ENST00000365490 HIST1H4AP62805 103 aaKnown RBP5.28□□□□□ -1.56
RN7SKP249-201ENST00000365490 Q8N9P0 234 aaPredicted RBP5.28□□□□□ -1.56
RN7SKP249-201ENST00000365490 TMEM254Q8TBM7 123 aa5.28□□□□□ -1.56
RN7SKP249-201ENST00000365490 LPAP08519 4548 aa5.27□□□□□ -1.57
RN7SKP249-201ENST00000365490 CASC2Q6XLA1 102 aa5.27□□□□□ -1.57
RN7SKP249-201ENST00000365490 Q75L30 129 aa5.27□□□□□ -1.57
RN7SKP249-201ENST00000365490 MRPL34Q9BQ48 92 aaKnown RBP5.26□□□□□ -1.57
RN7SKP249-201ENST00000365490 HMCN2Q8NDA2 5059 aa5.26□□□□□ -1.57
RN7SKP249-201ENST00000365490 A0A087WVE0 104 aa5.25□□□□□ -1.57
RN7SKP249-201ENST00000365490 RPL37P61927 97 aaKnown RBP5.25□□□□□ -1.57
RN7SKP249-201ENST00000365490 WFDC13Q8IUB5 93 aa5.25□□□□□ -1.57
RN7SKP249-201ENST00000365490 LRP2P98164 4655 aa5.2□□□□□ -1.58
RN7SKP249-201ENST00000365490 SEC61BP60468 96 aaKnown RBP5.19□□□□□ -1.58
RN7SKP249-201ENST00000365490 ATP11AUNQ6ZP68 121 aa5.18□□□□□ -1.58
RN7SKP249-201ENST00000365490 TP53AIP1Q9HCN2 124 aa5.18□□□□□ -1.58
RN7SKP249-201ENST00000365490 ZCCHC13Q8WW36 166 aaKnown RBP5.17□□□□□ -1.58
RN7SKP249-201ENST00000365490 NDUFS5O43920 106 aa5.16□□□□□ -1.58
RN7SKP249-201ENST00000365490 PCOTHQ58A44 107 aa5.16□□□□□ -1.58
RN7SKP249-201ENST00000365490 OCR1Q9BZK8 76 aa5.16□□□□□ -1.58
RN7SKP249-201ENST00000365490 Q5W150 140 aa5.15□□□□□ -1.59
RN7SKP249-201ENST00000365490 FAM236AA0A1B0GUQ0 79 aa5.14□□□□□ -1.59
RN7SKP249-201ENST00000365490 FAM236BA0A1B0GV22 79 aa5.14□□□□□ -1.59
RN7SKP249-201ENST00000365490 UQCRQO14949 82 aa5.13□□□□□ -1.59
RN7SKP249-201ENST00000365490 SCGB1A1P11684 91 aa5.13□□□□□ -1.59
RN7SKP249-201ENST00000365490 MUC17Q685J3 4493 aa5.11□□□□□ -1.59
RN7SKP249-201ENST00000365490 ATOX1O00244 68 aa5.1□□□□□ -1.59
RN7SKP249-201ENST00000365490 SMIM20Q8N5G0 67 aa5.1□□□□□ -1.59
RN7SKP249-201ENST00000365490 KRTAP4-1Q9BYQ7 146 aa5.1□□□□□ -1.59
RN7SKP249-201ENST00000365490 TRAV7A0A075B6U4 112 aa5.08□□□□□ -1.6
RN7SKP249-201ENST00000365490 TRAV22A0A0B4J277 110 aa5.08□□□□□ -1.6
RN7SKP249-201ENST00000365490 C5orf47Q569G3 176 aa5.08□□□□□ -1.6
RN7SKP249-201ENST00000365490 SPINK7P58062 85 aa5.07□□□□□ -1.6
RN7SKP249-201ENST00000365490 UBR4Q5T4S7 5183 aa5.06□□□□□ -1.6
RN7SKP249-201ENST00000365490 H0Y9P7 68 aa5.05□□□□□ -1.6
RN7SKP249-201ENST00000365490 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
RN7SKP249-201ENST00000365490 SERP2Q8N6R1 65 aa5.04□□□□□ -1.6
RN7SKP249-201ENST00000365490 H3BPC8 53 aa5.03□□□□□ -1.6
RN7SKP249-201ENST00000365490 LOC101927531A0A1B0GV80 90 aa5.02□□□□□ -1.61
RN7SKP249-201ENST00000365490 MP68P56378 58 aa5.02□□□□□ -1.61
RN7SKP249-201ENST00000365490 C7orf65Q6ZTY9 151 aa5.02□□□□□ -1.61
RN7SKP249-201ENST00000365490 CYP4F30PQ9H0H9 118 aa5.02□□□□□ -1.61
RN7SKP249-201ENST00000365490 IGKV2D-30A0A075B6S6 120 aa5.01□□□□□ -1.61
RN7SKP249-201ENST00000365490 HRES1P13985 223 aa5.01□□□□□ -1.61
RN7SKP249-201ENST00000365490 C1orf64Q8NEQ6 169 aa5.01□□□□□ -1.61
RN7SKP249-201ENST00000365490 MPLKIPQ8TAP9 179 aa5□□□□□ -1.61
RN7SKP249-201ENST00000365490 LINC00208Q96KT6 92 aa5□□□□□ -1.61
RN7SKP249-201ENST00000365490 MUC2Q02817 5179 aa5□□□□□ -1.61
RN7SKP249-201ENST00000365490 A0A0U1RQV1 116 aa4.98□□□□□ -1.61
RN7SKP249-201ENST00000365490 COX7CP15954 63 aa4.98□□□□□ -1.61
RN7SKP249-201ENST00000365490 KRTAP19-2Q3LHN2 52 aa4.98□□□□□ -1.61
RN7SKP249-201ENST00000365490 ANAPC13Q9BS18 74 aa4.96□□□□□ -1.62
RN7SKP249-201ENST00000365490 RNF213Q63HN8 5207 aa4.95□□□□□ -1.62
RN7SKP249-201ENST00000365490 KLKP1Q107X0 134 aa4.94□□□□□ -1.62
RN7SKP249-201ENST00000365490 C20orf197Q8N268 126 aa4.93□□□□□ -1.62
RN7SKP249-201ENST00000365490 RBM12B-AS1Q9P1G2 102 aa4.93□□□□□ -1.62
RN7SKP249-201ENST00000365490 C4orf26Q17RF5 130 aa4.92□□□□□ -1.62
RN7SKP249-201ENST00000365490 KRTAP4-8Q9BYQ9 185 aa4.92□□□□□ -1.62
RN7SKP249-201ENST00000365490 COX6B2Q6YFQ2 88 aa4.91□□□□□ -1.62
RN7SKP249-201ENST00000365490 SNURFQ9Y675 71 aa4.91□□□□□ -1.62
RN7SKP249-201ENST00000365490 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.89□□□□□ -1.63
RN7SKP249-201ENST00000365490 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
RN7SKP249-201ENST00000365490 CCDC179H3BU77 68 aa4.86□□□□□ -1.63
RN7SKP249-201ENST00000365490 NDUFC1O43677 76 aa4.86□□□□□ -1.63
RN7SKP249-201ENST00000365490 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
RN7SKP249-201ENST00000365490 CYSTM1Q9H1C7 97 aa4.86□□□□□ -1.63
RN7SKP249-201ENST00000365490 H1FX-AS1Q4G0G2 97 aa4.85□□□□□ -1.63
RN7SKP249-201ENST00000365490 KRTAP9-6A0A140TA67 174 aa4.84□□□□□ -1.63
RN7SKP249-201ENST00000365490 FAM236DA0A1B0GTK5 79 aa4.84□□□□□ -1.63
RN7SKP249-201ENST00000365490 H7BZZ5 65 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms