RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 TAX1BP3O14907 124 aa7.64□□□□□ -1.19
GDPD3-201ENST00000360688 VPS25Q9BRG1 176 aa7.64□□□□□ -1.19
GDPD3-201ENST00000360688 C9JAW5 83 aa7.63□□□□□ -1.19
GDPD3-201ENST00000360688 C21orf62-AS1Q17RA5 79 aa7.63□□□□□ -1.19
GDPD3-201ENST00000360688 A0A1W2PPM0 123 aa7.62□□□□□ -1.19
GDPD3-201ENST00000360688 SIGMAR1Q99720 223 aa7.61□□□□□ -1.19
GDPD3-201ENST00000360688 MT2AP02795 61 aa7.59□□□□□ -1.19
GDPD3-201ENST00000360688 PDE6GP18545 87 aa7.59□□□□□ -1.19
GDPD3-201ENST00000360688 IGKV4-1P06312 121 aa7.58□□□□□ -1.2
GDPD3-201ENST00000360688 LOC110117498A0A087WWA1 95 aa7.57□□□□□ -1.2
GDPD3-201ENST00000360688 H3BT86 120 aa7.57□□□□□ -1.2
GDPD3-201ENST00000360688 COL5A1-AS1Q5SY13 56 aa7.57□□□□□ -1.2
GDPD3-201ENST00000360688 Q6ZQT0 140 aa7.56□□□□□ -1.2
GDPD3-201ENST00000360688 LINC00472Q9H8W2 130 aa7.56□□□□□ -1.2
GDPD3-201ENST00000360688 A0A1B0GW54 56 aa7.55□□□□□ -1.2
GDPD3-201ENST00000360688 KRTAP16-1A8MUX0 517 aa7.55□□□□□ -1.2
GDPD3-201ENST00000360688 DSCR10P59022 87 aa7.55□□□□□ -1.2
GDPD3-201ENST00000360688 C14orf132Q9NPU4 83 aa7.54□□□□□ -1.2
GDPD3-201ENST00000360688 LCE2BO14633 110 aa7.53□□□□□ -1.2
GDPD3-201ENST00000360688 SPCS1Q9Y6A9 102 aa7.53□□□□□ -1.2
GDPD3-201ENST00000360688 MT1FP04733 61 aa7.52□□□□□ -1.2
GDPD3-201ENST00000360688 DEFB116Q30KQ4 102 aa7.52□□□□□ -1.2
GDPD3-201ENST00000360688 FAM236DA0A1B0GTK5 79 aa7.52□□□□□ -1.21
GDPD3-201ENST00000360688 FAM236CP0DP71 79 aa7.52□□□□□ -1.21
GDPD3-201ENST00000360688 LINC00313P59037 77 aa7.52□□□□□ -1.21
GDPD3-201ENST00000360688 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.21
GDPD3-201ENST00000360688 J3KT08 172 aa7.51□□□□□ -1.21
GDPD3-201ENST00000360688 MTURNQ8N3F0 131 aa7.51□□□□□ -1.21
GDPD3-201ENST00000360688 MPLKIPQ8TAP9 179 aa7.5□□□□□ -1.21
GDPD3-201ENST00000360688 KRTAP9-3Q9BYQ3 159 aa7.5□□□□□ -1.21
GDPD3-201ENST00000360688 PCP4L1A6NKN8 68 aa7.49□□□□□ -1.21
GDPD3-201ENST00000360688 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
GDPD3-201ENST00000360688 HRES1P13985 223 aa7.48□□□□□ -1.21
GDPD3-201ENST00000360688 KRTAP10-10P60014 251 aa7.47□□□□□ -1.21
GDPD3-201ENST00000360688 A0A1B0GVX0 72 aa7.46□□□□□ -1.22
GDPD3-201ENST00000360688 C8orf87E5RJ46 101 aa7.46□□□□□ -1.22
GDPD3-201ENST00000360688 RBM12B-AS1Q9P1G2 102 aa7.46□□□□□ -1.22
GDPD3-201ENST00000360688 NDUFB1O75438 58 aa7.45□□□□□ -1.22
GDPD3-201ENST00000360688 NOTCH2NLQ7Z3S9 236 aa7.45□□□□□ -1.22
GDPD3-201ENST00000360688 MACF1Q9UPN3 7388 aaKnown RBP7.45□□□□□ -1.22
GDPD3-201ENST00000360688 K7EP34 96 aa7.44□□□□□ -1.22
GDPD3-201ENST00000360688 NREPQ16612 68 aa7.43□□□□□ -1.22
GDPD3-201ENST00000360688 GTF2H5Q6ZYL4 71 aa7.41□□□□□ -1.22
GDPD3-201ENST00000360688 A8MWP4 228 aa7.4□□□□□ -1.22
GDPD3-201ENST00000360688 SMCPP49901 116 aaPredicted RBP7.4□□□□□ -1.22
GDPD3-201ENST00000360688 SYNE2Q8WXH0 6885 aaKnown RBP7.39□□□□□ -1.23
GDPD3-201ENST00000360688 PRO0461Q9UI25 63 aa7.38□□□□□ -1.23
GDPD3-201ENST00000360688 IGKV3D-7A0A0C4DH55 119 aa7.34□□□□□ -1.23
GDPD3-201ENST00000360688 C8orf17Q9NRJ1 99 aa7.34□□□□□ -1.23
GDPD3-201ENST00000360688 PRR15Q8IV56 129 aa7.33□□□□□ -1.24
GDPD3-201ENST00000360688 F8W1H4 67 aa7.32□□□□□ -1.24
GDPD3-201ENST00000360688 BPY2O14599 106 aa7.31□□□□□ -1.24
GDPD3-201ENST00000360688 KRTAP19-6Q3LI70 58 aa7.31□□□□□ -1.24
GDPD3-201ENST00000360688 Q6ZVQ6 151 aa7.3□□□□□ -1.24
GDPD3-201ENST00000360688 LINC00846Q9NV44 126 aa7.3□□□□□ -1.24
GDPD3-201ENST00000360688 Q8N9P0 234 aaPredicted RBP7.29□□□□□ -1.24
GDPD3-201ENST00000360688 K7EQZ3 153 aa7.27□□□□□ -1.24
GDPD3-201ENST00000360688 UBL5Q9BZL1 73 aa7.27□□□□□ -1.24
GDPD3-201ENST00000360688 SPINK7P58062 85 aa7.27□□□□□ -1.25
GDPD3-201ENST00000360688 ZCCHC13Q8WW36 166 aaKnown RBP7.27□□□□□ -1.25
GDPD3-201ENST00000360688 MMP24-AS1A0A0U1RRL7 71 aa7.26□□□□□ -1.25
GDPD3-201ENST00000360688 TMEM254Q8TBM7 123 aa7.26□□□□□ -1.25
GDPD3-201ENST00000360688 ETDBQ3ZM63 59 aa7.25□□□□□ -1.25
GDPD3-201ENST00000360688 MRPL34Q9BQ48 92 aaKnown RBP7.25□□□□□ -1.25
GDPD3-201ENST00000360688 hDV103S1A0JD37 113 aa7.24□□□□□ -1.25
GDPD3-201ENST00000360688 Q8N9L7 120 aa7.19□□□□□ -1.26
GDPD3-201ENST00000360688 NDUFS5O43920 106 aa7.18□□□□□ -1.26
GDPD3-201ENST00000360688 WFDC13Q8IUB5 93 aa7.17□□□□□ -1.26
GDPD3-201ENST00000360688 CASC2Q6XLA1 102 aa7.16□□□□□ -1.26
GDPD3-201ENST00000360688 KRTAP6-3Q3LI67 103 aa7.14□□□□□ -1.27
GDPD3-201ENST00000360688 HCG22E2RYF7 251 aa7.12□□□□□ -1.27
GDPD3-201ENST00000360688 ACYP1P07311 99 aa7.12□□□□□ -1.27
GDPD3-201ENST00000360688 CXCL6P80162 114 aa7.12□□□□□ -1.27
GDPD3-201ENST00000360688 FAM240AA0A1B0GVK7 77 aa7.08□□□□□ -1.28
GDPD3-201ENST00000360688 A0A1B0GV90 55 aa7.07□□□□□ -1.28
GDPD3-201ENST00000360688 Q5W150 140 aa7.04□□□□□ -1.28
GDPD3-201ENST00000360688 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
GDPD3-201ENST00000360688 IGKV2D-30A0A075B6S6 120 aa7.02□□□□□ -1.28
GDPD3-201ENST00000360688 IGKV2-30P06310 120 aa7.02□□□□□ -1.28
GDPD3-201ENST00000360688 ATP5EP2Q5VTU8 51 aa7.02□□□□□ -1.28
GDPD3-201ENST00000360688 C7orf65Q6ZTY9 151 aa7.02□□□□□ -1.28
GDPD3-201ENST00000360688 TP53AIP1Q9HCN2 124 aa7□□□□□ -1.29
GDPD3-201ENST00000360688 NEBP20929 6669 aa6.96□□□□□ -1.3
GDPD3-201ENST00000360688 MUC12Q9UKN1 5478 aa6.95□□□□□ -1.3
GDPD3-201ENST00000360688 HIST1H4AP62805 103 aaKnown RBP6.94□□□□□ -1.3
GDPD3-201ENST00000360688 LINC00643Q86TS7 51 aa6.94□□□□□ -1.3
GDPD3-201ENST00000360688 J3QR89 54 aa6.92□□□□□ -1.3
GDPD3-201ENST00000360688 A6NN06 94 aa6.86□□□□□ -1.31
GDPD3-201ENST00000360688 C4orf26Q17RF5 130 aa6.86□□□□□ -1.31
GDPD3-201ENST00000360688 TRAV22A0A0B4J277 110 aa6.85□□□□□ -1.31
GDPD3-201ENST00000360688 A0A087WVE0 104 aa6.83□□□□□ -1.32
GDPD3-201ENST00000360688 MT1BP07438 61 aa6.83□□□□□ -1.32
GDPD3-201ENST00000360688 UQCRQO14949 82 aa6.82□□□□□ -1.32
GDPD3-201ENST00000360688 LOC101927531A0A1B0GV80 90 aa6.8□□□□□ -1.32
GDPD3-201ENST00000360688 C5orf47Q569G3 176 aa6.8□□□□□ -1.32
GDPD3-201ENST00000360688 FAM236AA0A1B0GUQ0 79 aa6.79□□□□□ -1.32
GDPD3-201ENST00000360688 FAM236BA0A1B0GV22 79 aa6.79□□□□□ -1.32
GDPD3-201ENST00000360688 ATOX1O00244 68 aa6.78□□□□□ -1.32
GDPD3-201ENST00000360688 Q5VV11 94 aa6.78□□□□□ -1.32
GDPD3-201ENST00000360688 CYP4F30PQ9H0H9 118 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms