RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 LIMD2Q9BT23 127 aa12.1□□□□□ -0.47
MAP1LC3A-201ENST00000360668 MYCBP2O75592 4640 aa12.08□□□□□ -0.47
MAP1LC3A-201ENST00000360668 NDUFB1O75438 58 aa12.08□□□□□ -0.48
MAP1LC3A-201ENST00000360668 HCG22E2RYF7 251 aa12.07□□□□□ -0.48
MAP1LC3A-201ENST00000360668 RPS29P62273 56 aaKnown RBP12.07□□□□□ -0.48
MAP1LC3A-201ENST00000360668 OCR1Q9BZK8 76 aa12.03□□□□□ -0.48
MAP1LC3A-201ENST00000360668 FLG2Q5D862 2391 aaPredicted RBP12.03□□□□□ -0.48
MAP1LC3A-201ENST00000360668 FAT3Q8TDW7 4589 aa12□□□□□ -0.49
MAP1LC3A-201ENST00000360668 KRTAP10-8P60410 259 aa12□□□□□ -0.49
MAP1LC3A-201ENST00000360668 C1orf195Q5TG92 126 aa12□□□□□ -0.49
MAP1LC3A-201ENST00000360668 KRTAP29-1A8MX34 341 aaPredicted RBP11.99□□□□□ -0.49
MAP1LC3A-201ENST00000360668 LRP1Q07954 4544 aaKnown RBP11.98□□□□□ -0.49
MAP1LC3A-201ENST00000360668 TNXBP22105 4242 aa11.97□□□□□ -0.49
MAP1LC3A-201ENST00000360668 HERC1Q15751 4861 aa11.96□□□□□ -0.49
MAP1LC3A-201ENST00000360668 DMBT1Q9UGM3 2413 aaPredicted RBP11.96□□□□□ -0.5
MAP1LC3A-201ENST00000360668 A0A1B0GVX0 72 aa11.94□□□□□ -0.5
MAP1LC3A-201ENST00000360668 CASC2Q6XLA1 102 aa11.94□□□□□ -0.5
MAP1LC3A-201ENST00000360668 WFDC13Q8IUB5 93 aa11.92□□□□□ -0.5
MAP1LC3A-201ENST00000360668 MMP24-AS1A0A0U1RRL7 71 aa11.91□□□□□ -0.5
MAP1LC3A-201ENST00000360668 KLKP1Q107X0 134 aa11.91□□□□□ -0.5
MAP1LC3A-201ENST00000360668 C20orf197Q8N268 126 aa11.91□□□□□ -0.5
MAP1LC3A-201ENST00000360668 IGHV6-1A0A0B4J1U7 121 aa11.89□□□□□ -0.51
MAP1LC3A-201ENST00000360668 C8orf17Q9NRJ1 99 aa11.88□□□□□ -0.51
MAP1LC3A-201ENST00000360668 hDV103S1A0JD37 113 aa11.87□□□□□ -0.51
MAP1LC3A-201ENST00000360668 C5orf47Q569G3 176 aa11.87□□□□□ -0.51
MAP1LC3A-201ENST00000360668 J3QL48 77 aa11.86□□□□□ -0.51
MAP1LC3A-201ENST00000360668 TMEM254Q8TBM7 123 aa11.85□□□□□ -0.51
MAP1LC3A-201ENST00000360668 OXTP01178 125 aa11.84□□□□□ -0.51
MAP1LC3A-201ENST00000360668 C8orf87E5RJ46 101 aa11.83□□□□□ -0.52
MAP1LC3A-201ENST00000360668 NDUFC1O43677 76 aa11.83□□□□□ -0.52
MAP1LC3A-201ENST00000360668 MT1HL1P0DM35 61 aa11.83□□□□□ -0.52
MAP1LC3A-201ENST00000360668 A0A0U1RQV1 116 aa11.8□□□□□ -0.52
MAP1LC3A-201ENST00000360668 CYSTM1Q9H1C7 97 aa11.8□□□□□ -0.52
MAP1LC3A-201ENST00000360668 NOTCH2NLQ7Z3S9 236 aa11.79□□□□□ -0.52
MAP1LC3A-201ENST00000360668 TMEM258P61165 79 aa11.79□□□□□ -0.52
MAP1LC3A-201ENST00000360668 TP53AIP1Q9HCN2 124 aa11.79□□□□□ -0.52
MAP1LC3A-201ENST00000360668 MRPL34Q9BQ48 92 aaKnown RBP11.76□□□□□ -0.53
MAP1LC3A-201ENST00000360668 SNURFQ9Y675 71 aa11.76□□□□□ -0.53
MAP1LC3A-201ENST00000360668 LINC00313P59037 77 aa11.75□□□□□ -0.53
MAP1LC3A-201ENST00000360668 H3BPC8 53 aa11.74□□□□□ -0.53
MAP1LC3A-201ENST00000360668 H7BZZ5 65 aa11.73□□□□□ -0.53
MAP1LC3A-201ENST00000360668 MP68P56378 58 aa11.73□□□□□ -0.53
MAP1LC3A-201ENST00000360668 ZCCHC13Q8WW36 166 aaKnown RBP11.71□□□□□ -0.54
MAP1LC3A-201ENST00000360668 RETNLBQ9BQ08 111 aa11.7□□□□□ -0.54
MAP1LC3A-201ENST00000360668 H0Y9P7 68 aa11.65□□□□□ -0.54
MAP1LC3A-201ENST00000360668 KRTAP16-1A8MUX0 517 aa11.64□□□□□ -0.55
MAP1LC3A-201ENST00000360668 FP248Q71RG6 208 aaPredicted RBP11.64□□□□□ -0.55
MAP1LC3A-201ENST00000360668 TRAV22A0A0B4J277 110 aa11.62□□□□□ -0.55
MAP1LC3A-201ENST00000360668 NDUFS5O43920 106 aa11.61□□□□□ -0.55
MAP1LC3A-201ENST00000360668 ATP5EP56381 51 aaPredicted RBP11.6□□□□□ -0.55
MAP1LC3A-201ENST00000360668 Q8N9P0 234 aaPredicted RBP11.6□□□□□ -0.55
MAP1LC3A-201ENST00000360668 LINC00208Q96KT6 92 aa11.6□□□□□ -0.55
MAP1LC3A-201ENST00000360668 FAM236DA0A1B0GTK5 79 aa11.58□□□□□ -0.55
MAP1LC3A-201ENST00000360668 FAM236CP0DP71 79 aa11.58□□□□□ -0.55
MAP1LC3A-201ENST00000360668 RPS28P62857 69 aaKnown RBP11.58□□□□□ -0.56
MAP1LC3A-201ENST00000360668 C1orf64Q8NEQ6 169 aa11.56□□□□□ -0.56
MAP1LC3A-201ENST00000360668 C9orf92A6NGG3 77 aa11.53□□□□□ -0.56
MAP1LC3A-201ENST00000360668 HMCN2Q8NDA2 5059 aa11.52□□□□□ -0.56
MAP1LC3A-201ENST00000360668 IGLV7-46A0A075B6I9 117 aa11.5□□□□□ -0.57
MAP1LC3A-201ENST00000360668 KRTAP13-3Q3SY46 172 aa11.47□□□□□ -0.57
MAP1LC3A-201ENST00000360668 C20orf166-AS1Q96NR2 134 aa11.45□□□□□ -0.58
MAP1LC3A-201ENST00000360668 Q5W150 140 aa11.45□□□□□ -0.58
MAP1LC3A-201ENST00000360668 LOC101927531A0A1B0GV80 90 aa11.44□□□□□ -0.58
MAP1LC3A-201ENST00000360668 A8MUU9 505 aa11.44□□□□□ -0.58
MAP1LC3A-201ENST00000360668 SPANXA2-OT1Q8N9U9 137 aa11.44□□□□□ -0.58
MAP1LC3A-201ENST00000360668 PRR4Q16378 134 aa11.43□□□□□ -0.58
MAP1LC3A-201ENST00000360668 SERP1Q9Y6X1 66 aa11.43□□□□□ -0.58
MAP1LC3A-201ENST00000360668 CYP4F30PQ9H0H9 118 aa11.39□□□□□ -0.59
MAP1LC3A-201ENST00000360668 Q75L30 129 aa11.37□□□□□ -0.59
MAP1LC3A-201ENST00000360668 TPRXLQ17RH7 258 aa11.33□□□□□ -0.6
MAP1LC3A-201ENST00000360668 XP32Q5T750 250 aa11.31□□□□□ -0.6
MAP1LC3A-201ENST00000360668 IGKV2-30P06310 120 aa11.28□□□□□ -0.6
MAP1LC3A-201ENST00000360668 UBR4Q5T4S7 5183 aa11.26□□□□□ -0.61
MAP1LC3A-201ENST00000360668 PCOTHQ58A44 107 aa11.26□□□□□ -0.61
MAP1LC3A-201ENST00000360668 RPL37P61927 97 aaKnown RBP11.25□□□□□ -0.61
MAP1LC3A-201ENST00000360668 LRP2P98164 4655 aa11.2□□□□□ -0.62
MAP1LC3A-201ENST00000360668 ATP11AUNQ6ZP68 121 aa11.19□□□□□ -0.62
MAP1LC3A-201ENST00000360668 SMIM26A0A096LP01 95 aa11.18□□□□□ -0.62
MAP1LC3A-201ENST00000360668 IGKV2D-30A0A075B6S6 120 aa11.16□□□□□ -0.62
MAP1LC3A-201ENST00000360668 C7orf65Q6ZTY9 151 aa11.14□□□□□ -0.63
MAP1LC3A-201ENST00000360668 LPAP08519 4548 aa11.12□□□□□ -0.63
MAP1LC3A-201ENST00000360668 HRES1P13985 223 aa11.11□□□□□ -0.63
MAP1LC3A-201ENST00000360668 SPINK7P58062 85 aa11.04□□□□□ -0.64
MAP1LC3A-201ENST00000360668 ACYP2P14621 99 aa11.03□□□□□ -0.64
MAP1LC3A-201ENST00000360668 COA5Q86WW8 74 aa11.02□□□□□ -0.65
MAP1LC3A-201ENST00000360668 DMAC1Q96GE9 116 aa11.02□□□□□ -0.65
MAP1LC3A-201ENST00000360668 RNF213Q63HN8 5207 aa10.99□□□□□ -0.65
MAP1LC3A-201ENST00000360668 SEC61BP60468 96 aaKnown RBP10.94□□□□□ -0.66
MAP1LC3A-201ENST00000360668 Q1T7F1 81 aa10.91□□□□□ -0.66
MAP1LC3A-201ENST00000360668 A8MUN3 132 aa10.9□□□□□ -0.66
MAP1LC3A-201ENST00000360668 V9GYY9 64 aa10.9□□□□□ -0.66
MAP1LC3A-201ENST00000360668 MUC17Q685J3 4493 aa10.87□□□□□ -0.67
MAP1LC3A-201ENST00000360668 C4orf26Q17RF5 130 aa10.86□□□□□ -0.67
MAP1LC3A-201ENST00000360668 MPLKIPQ8TAP9 179 aa10.84□□□□□ -0.67
MAP1LC3A-201ENST00000360668 CHKB-CPT1BH3BT56 60 aa10.79□□□□□ -0.68
MAP1LC3A-201ENST00000360668 COX6B2Q6YFQ2 88 aa10.77□□□□□ -0.69
MAP1LC3A-201ENST00000360668 KRTAP3-1Q9BYR8 98 aa10.73□□□□□ -0.69
MAP1LC3A-201ENST00000360668 MUC2Q02817 5179 aa10.71□□□□□ -0.69
MAP1LC3A-201ENST00000360668 LINC01558Q9Y6Z2 57 aa10.71□□□□□ -0.69
MAP1LC3A-201ENST00000360668 KRTAP4-1Q9BYQ7 146 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms