RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 ROMO1P60602 79 aa2.54□□□□□ -2
PTPN22-201ENST00000359785 DEFB105AQ8NG35 78 aa2.54□□□□□ -2
PTPN22-201ENST00000359785 OTOGQ6ZRI0 2925 aa2.54□□□□□ -2
PTPN22-201ENST00000359785 WNK1Q9H4A3 2382 aa2.54□□□□□ -2
PTPN22-201ENST00000359785 A0A1B0GU69 56 aa2.54□□□□□ -2
PTPN22-201ENST00000359785 SPTSSBQ8NFR3 76 aa2.54□□□□□ -2
PTPN22-201ENST00000359785 CASC10Q5T4H9 136 aa2.54□□□□□ -2
PTPN22-201ENST00000359785 NSD1Q96L73 2696 aaPredicted RBP2.53□□□□□ -2
PTPN22-201ENST00000359785 ROS1P08922 2347 aa2.53□□□□□ -2
PTPN22-201ENST00000359785 CUBNO60494 3623 aa2.53□□□□□ -2.01
PTPN22-201ENST00000359785 Q6ZSA8 131 aa2.53□□□□□ -2.01
PTPN22-201ENST00000359785 CRYBG3Q68DQ2 2970 aa2.52□□□□□ -2.01
PTPN22-201ENST00000359785 PANO1I0J062 215 aa2.52□□□□□ -2.01
PTPN22-201ENST00000359785 NBDYA0A0U1RRE5 68 aa2.52□□□□□ -2.01
PTPN22-201ENST00000359785 PRLHP81277 87 aa2.52□□□□□ -2.01
PTPN22-201ENST00000359785 C20orf166-AS1Q96NR2 134 aa2.52□□□□□ -2.01
PTPN22-201ENST00000359785 KRTAP1-5Q9BYS1 174 aa2.52□□□□□ -2.01
PTPN22-201ENST00000359785 H0YAA0 97 aa2.51□□□□□ -2.01
PTPN22-201ENST00000359785 KRTAP19-1Q8IUB9 90 aa2.51□□□□□ -2.01
PTPN22-201ENST00000359785 PTPN13Q12923 2485 aa2.51□□□□□ -2.01
PTPN22-201ENST00000359785 CREBBPQ92793 2442 aa2.51□□□□□ -2.01
PTPN22-201ENST00000359785 FLNAP21333 2647 aaKnown RBP2.51□□□□□ -2.01
PTPN22-201ENST00000359785 FBN1P35555 2871 aaKnown RBP2.51□□□□□ -2.01
PTPN22-201ENST00000359785 CSMD3Q7Z407 3707 aa2.5□□□□□ -2.01
PTPN22-201ENST00000359785 HIVEP2P31629 2446 aa2.5□□□□□ -2.01
PTPN22-201ENST00000359785 TEX15Q9BXT5 2789 aa2.5□□□□□ -2.01
PTPN22-201ENST00000359785 FN1P02751 2386 aaKnown RBP2.5□□□□□ -2.01
PTPN22-201ENST00000359785 DEFB116Q30KQ4 102 aa2.5□□□□□ -2.01
PTPN22-201ENST00000359785 ABCA12Q86UK0 2595 aa2.5□□□□□ -2.01
PTPN22-201ENST00000359785 NIPBLQ6KC79 2804 aaeCLIP2.5□□□□□ -2.01
PTPN22-201ENST00000359785 LINC00304Q8N9R0 145 aa2.49□□□□□ -2.01
PTPN22-201ENST00000359785 APOBP04114 4563 aaKnown RBP2.49□□□□□ -2.01
PTPN22-201ENST00000359785 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.49□□□□□ -2.01
PTPN22-201ENST00000359785 GCN1Q92616 2671 aaKnown RBP2.49□□□□□ -2.01
PTPN22-201ENST00000359785 RP1L1Q8IWN7 2480 aaPredicted RBP2.49□□□□□ -2.01
PTPN22-201ENST00000359785 BAHCC1Q9P281 2608 aa2.49□□□□□ -2.01
PTPN22-201ENST00000359785 KRTAP15-1Q3LI76 137 aa2.48□□□□□ -2.01
PTPN22-201ENST00000359785 HELZ2Q9BYK8 2649 aaKnown RBP2.48□□□□□ -2.01
PTPN22-201ENST00000359785 DNAH5Q8TE73 4624 aa2.48□□□□□ -2.01
PTPN22-201ENST00000359785 PRR4Q16378 134 aa2.48□□□□□ -2.01
PTPN22-201ENST00000359785 NBASA2RRP1 2371 aa2.48□□□□□ -2.01
PTPN22-201ENST00000359785 H3BS24 57 aa2.48□□□□□ -2.01
PTPN22-201ENST00000359785 COL12A1Q99715 3063 aa2.48□□□□□ -2.01
PTPN22-201ENST00000359785 TEP1Q99973 2627 aaKnown RBP2.48□□□□□ -2.01
PTPN22-201ENST00000359785 LRRK2Q5S007 2527 aa2.47□□□□□ -2.01
PTPN22-201ENST00000359785 EPG5Q9HCE0 2579 aa2.47□□□□□ -2.01
PTPN22-201ENST00000359785 H1FX-AS1Q4G0G2 97 aa2.47□□□□□ -2.01
PTPN22-201ENST00000359785 FLGP20930 4061 aaPredicted RBP2.47□□□□□ -2.01
PTPN22-201ENST00000359785 PCOTHQ58A44 107 aa2.47□□□□□ -2.01
PTPN22-201ENST00000359785 TPRP12270 2363 aaKnown RBP2.46□□□□□ -2.01
PTPN22-201ENST00000359785 CSAG1Q6PB30 78 aa2.46□□□□□ -2.02
PTPN22-201ENST00000359785 ADM2Q7Z4H4 148 aa2.46□□□□□ -2.02
PTPN22-201ENST00000359785 FBN3Q75N90 2809 aa2.46□□□□□ -2.02
PTPN22-201ENST00000359785 HIVEP1P15822 2718 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 KRTAP1-4P0C5Y4 121 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 PRAC1Q96KF2 57 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 CSPG4Q6UVK1 2322 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 CDK2AP2O75956 126 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 UBE2DNLQ8IWF7 75 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 A0A087WTM6 91 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 DEFB4AO15263 64 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 SPTAN1Q13813 2472 aaKnown RBP2.44□□□□□ -2.02
PTPN22-201ENST00000359785 PSORS1C2Q9UIG4 136 aa2.44□□□□□ -2.02
PTPN22-201ENST00000359785 SORL1Q92673 2214 aa2.44□□□□□ -2.02
PTPN22-201ENST00000359785 A0A0G2JQZ4 141 aa2.44□□□□□ -2.02
PTPN22-201ENST00000359785 C1orf134Q5TEV5 83 aa2.44□□□□□ -2.02
PTPN22-201ENST00000359785 P0C880 135 aa2.43□□□□□ -2.02
PTPN22-201ENST00000359785 HTN3P15516 51 aa2.43□□□□□ -2.02
PTPN22-201ENST00000359785 KRTAP13-2Q52LG2 175 aa2.43□□□□□ -2.02
PTPN22-201ENST00000359785 KRTAP3-1Q9BYR8 98 aa2.43□□□□□ -2.02
PTPN22-201ENST00000359785 MYO9AB2RTY4 2548 aa2.43□□□□□ -2.02
PTPN22-201ENST00000359785 ITPR2Q14571 2701 aa2.43□□□□□ -2.02
PTPN22-201ENST00000359785 SPINK1P00995 79 aa2.43□□□□□ -2.02
PTPN22-201ENST00000359785 MYCBP2O75592 4640 aa2.42□□□□□ -2.02
PTPN22-201ENST00000359785 CSMD2Q7Z408 3487 aa2.42□□□□□ -2.02
PTPN22-201ENST00000359785 FASNP49327 2511 aaKnown RBP2.41□□□□□ -2.02
PTPN22-201ENST00000359785 FAT3Q8TDW7 4589 aa2.41□□□□□ -2.02
PTPN22-201ENST00000359785 A0A1B0GVY2 172 aa2.41□□□□□ -2.02
PTPN22-201ENST00000359785 KRTAP23-1A1A580 65 aa2.41□□□□□ -2.02
PTPN22-201ENST00000359785 DYNC1H1Q14204 4646 aaKnown RBP2.41□□□□□ -2.02
PTPN22-201ENST00000359785 C2CD3Q4AC94 2353 aa2.4□□□□□ -2.02
PTPN22-201ENST00000359785 MAST4O15021 2626 aa2.4□□□□□ -2.02
PTPN22-201ENST00000359785 NOTCH2Q04721 2471 aa2.4□□□□□ -2.03
PTPN22-201ENST00000359785 KRTAP10-6P60371 365 aaPredicted RBP2.4□□□□□ -2.03
PTPN22-201ENST00000359785 NF1P21359 2839 aa2.39□□□□□ -2.03
PTPN22-201ENST00000359785 A0A1B0GU33 70 aa2.39□□□□□ -2.03
PTPN22-201ENST00000359785 POLQO75417 2590 aa2.39□□□□□ -2.03
PTPN22-201ENST00000359785 ZANQ9Y493 2812 aa2.38□□□□□ -2.03
PTPN22-201ENST00000359785 ZFYVE26Q68DK2 2539 aa2.38□□□□□ -2.03
PTPN22-201ENST00000359785 SPINK6Q6UWN8 80 aa2.36□□□□□ -2.03
PTPN22-201ENST00000359785 VWFP04275 2813 aa2.36□□□□□ -2.03
PTPN22-201ENST00000359785 F8P00451 2351 aa2.36□□□□□ -2.03
PTPN22-201ENST00000359785 STARD9Q9P2P6 4700 aa2.36□□□□□ -2.03
PTPN22-201ENST00000359785 LRP1Q07954 4544 aaKnown RBP2.36□□□□□ -2.03
PTPN22-201ENST00000359785 SPG11Q96JI7 2443 aa2.35□□□□□ -2.03
PTPN22-201ENST00000359785 FAT1Q14517 4588 aa2.35□□□□□ -2.03
PTPN22-201ENST00000359785 CENPEQ02224 2701 aa2.35□□□□□ -2.03
PTPN22-201ENST00000359785 IGLV9-49A0A0B4J1Y8 123 aa2.35□□□□□ -2.03
PTPN22-201ENST00000359785 KRTAP10-4P60372 401 aaPredicted RBP2.35□□□□□ -2.03
PTPN22-201ENST00000359785 SPRR5A0A1B0GTR4 108 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms