RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 SPTSSBQ8NFR3 76 aa11.39□□□□□ -0.59
SNX11-201ENST00000359238 PKHD1P08F94 4074 aa11.39□□□□□ -0.59
SNX11-201ENST00000359238 NDUFS5O43920 106 aa11.37□□□□□ -0.59
SNX11-201ENST00000359238 RBM12B-AS1Q9P1G2 102 aa11.37□□□□□ -0.59
SNX11-201ENST00000359238 KMT2CQ8NEZ4 4911 aaKnown RBP11.36□□□□□ -0.59
SNX11-201ENST00000359238 A6NED7 52 aa11.36□□□□□ -0.59
SNX11-201ENST00000359238 COA5Q86WW8 74 aa11.36□□□□□ -0.59
SNX11-201ENST00000359238 A6NN06 94 aa11.35□□□□□ -0.59
SNX11-201ENST00000359238 LRP1BQ9NZR2 4599 aa11.35□□□□□ -0.59
SNX11-201ENST00000359238 IGLV7-46A0A075B6I9 117 aa11.34□□□□□ -0.59
SNX11-201ENST00000359238 A8MWP4 228 aa11.32□□□□□ -0.6
SNX11-201ENST00000359238 CDC42SE1Q9NRR8 79 aa11.32□□□□□ -0.6
SNX11-201ENST00000359238 RYR2Q92736 4967 aa11.29□□□□□ -0.6
SNX11-201ENST00000359238 LINC00472Q9H8W2 130 aa11.28□□□□□ -0.6
SNX11-201ENST00000359238 PLAC8Q9NZF1 115 aa11.27□□□□□ -0.6
SNX11-201ENST00000359238 KRTAP13-1Q8IUC0 172 aa11.26□□□□□ -0.61
SNX11-201ENST00000359238 LINC01558Q9Y6Z2 57 aa11.26□□□□□ -0.61
SNX11-201ENST00000359238 KRTAP10-1P60331 282 aa11.25□□□□□ -0.61
SNX11-201ENST00000359238 PSORS1C2Q9UIG4 136 aa11.23□□□□□ -0.61
SNX11-201ENST00000359238 MMP24-AS1A0A0U1RRL7 71 aa11.22□□□□□ -0.61
SNX11-201ENST00000359238 C7orf65Q6ZTY9 151 aa11.21□□□□□ -0.62
SNX11-201ENST00000359238 CIRBP-AS1Q8TBR5 109 aa11.21□□□□□ -0.62
SNX11-201ENST00000359238 H0Y9J4 135 aa11.19□□□□□ -0.62
SNX11-201ENST00000359238 MOBPQ13875 183 aa11.19□□□□□ -0.62
SNX11-201ENST00000359238 SPRR1BP22528 89 aa11.19□□□□□ -0.62
SNX11-201ENST00000359238 DYNC1H1Q14204 4646 aaKnown RBP11.18□□□□□ -0.62
SNX11-201ENST00000359238 VPS13BQ7Z7G8 4022 aa11.17□□□□□ -0.62
SNX11-201ENST00000359238 SPAG11AQ6PDA7 123 aa11.17□□□□□ -0.62
SNX11-201ENST00000359238 PCOTHQ58A44 107 aa11.16□□□□□ -0.62
SNX11-201ENST00000359238 Q6ZSA8 131 aa11.16□□□□□ -0.62
SNX11-201ENST00000359238 TP53AIP1Q9HCN2 124 aa11.15□□□□□ -0.62
SNX11-201ENST00000359238 ASB16-AS1Q495Z4 193 aa11.13□□□□□ -0.63
SNX11-201ENST00000359238 ANAPC11Q9NYG5 84 aa11.12□□□□□ -0.63
SNX11-201ENST00000359238 SPINK7P58062 85 aa11.09□□□□□ -0.63
SNX11-201ENST00000359238 RYR3Q15413 4870 aa11.09□□□□□ -0.63
SNX11-201ENST00000359238 A0A1B0GVY2 172 aa11.09□□□□□ -0.63
SNX11-201ENST00000359238 HRES1P13985 223 aa11.07□□□□□ -0.64
SNX11-201ENST00000359238 ZNF861PO60384 105 aa11.04□□□□□ -0.64
SNX11-201ENST00000359238 APOBP04114 4563 aaKnown RBP11.04□□□□□ -0.64
SNX11-201ENST00000359238 IGLV9-49A0A0B4J1Y8 123 aa11.02□□□□□ -0.64
SNX11-201ENST00000359238 IGLV7-43P04211 117 aa11.02□□□□□ -0.64
SNX11-201ENST00000359238 Q96NJ1 140 aa11.02□□□□□ -0.64
SNX11-201ENST00000359238 FAT1Q14517 4588 aa11.02□□□□□ -0.64
SNX11-201ENST00000359238 C8orf17Q9NRJ1 99 aa11.02□□□□□ -0.65
SNX11-201ENST00000359238 LINC00483Q53H64 154 aa10.98□□□□□ -0.65
SNX11-201ENST00000359238 A0A1B0GVX0 72 aa10.92□□□□□ -0.66
SNX11-201ENST00000359238 ZNF706Q9Y5V0 76 aaPredicted RBP10.92□□□□□ -0.66
SNX11-201ENST00000359238 SMR3BP02814 79 aaPredicted RBP10.91□□□□□ -0.66
SNX11-201ENST00000359238 LINC00313P59037 77 aa10.91□□□□□ -0.66
SNX11-201ENST00000359238 MRPL34Q9BQ48 92 aaKnown RBP10.91□□□□□ -0.66
SNX11-201ENST00000359238 C8orf87E5RJ46 101 aa10.9□□□□□ -0.66
SNX11-201ENST00000359238 IGHV6-1A0A0B4J1U7 121 aa10.89□□□□□ -0.67
SNX11-201ENST00000359238 PRR26Q8N8Z3 221 aa10.87□□□□□ -0.67
SNX11-201ENST00000359238 A0A087X002 238 aa10.84□□□□□ -0.67
SNX11-201ENST00000359238 CDK2AP2O75956 126 aa10.84□□□□□ -0.67
SNX11-201ENST00000359238 PLA2G1BP04054 148 aaKnown RBP10.83□□□□□ -0.68
SNX11-201ENST00000359238 PRAC1Q96KF2 57 aa10.81□□□□□ -0.68
SNX11-201ENST00000359238 ACYP2P14621 99 aa10.8□□□□□ -0.68
SNX11-201ENST00000359238 KRTAP13-2Q52LG2 175 aa10.78□□□□□ -0.68
SNX11-201ENST00000359238 KRTAP1-4P0C5Y4 121 aa10.78□□□□□ -0.68
SNX11-201ENST00000359238 NOTCH2NLQ7Z3S9 236 aa10.78□□□□□ -0.68
SNX11-201ENST00000359238 KRTAP13-3Q3SY46 172 aa10.77□□□□□ -0.69
SNX11-201ENST00000359238 C4orf48Q5BLP8 95 aa10.74□□□□□ -0.69
SNX11-201ENST00000359238 Q5W150 140 aa10.74□□□□□ -0.69
SNX11-201ENST00000359238 ADM2Q7Z4H4 148 aa10.73□□□□□ -0.69
SNX11-201ENST00000359238 HSPG2P98160 4391 aa10.73□□□□□ -0.69
SNX11-201ENST00000359238 SPATA8Q6RVD6 105 aa10.72□□□□□ -0.69
SNX11-201ENST00000359238 LINC01554Q52M75 96 aa10.72□□□□□ -0.69
SNX11-201ENST00000359238 DMAC1Q96GE9 116 aa10.7□□□□□ -0.7
SNX11-201ENST00000359238 KRTAP10-4P60372 401 aaPredicted RBP10.69□□□□□ -0.7
SNX11-201ENST00000359238 EPPK1P58107 5090 aaKnown RBP10.69□□□□□ -0.7
SNX11-201ENST00000359238 A0A1B0GU69 56 aa10.68□□□□□ -0.7
SNX11-201ENST00000359238 SPINK6Q6UWN8 80 aa10.68□□□□□ -0.7
SNX11-201ENST00000359238 PKHD1L1Q86WI1 4243 aa10.66□□□□□ -0.7
SNX11-201ENST00000359238 KIAA1109Q2LD37 5005 aa10.63□□□□□ -0.71
SNX11-201ENST00000359238 RYR1P21817 5038 aa10.63□□□□□ -0.71
SNX11-201ENST00000359238 SSBP3-AS1Q7Z2R9 100 aa10.62□□□□□ -0.71
SNX11-201ENST00000359238 LRP1Q07954 4544 aaKnown RBP10.62□□□□□ -0.71
SNX11-201ENST00000359238 MIR22HGQ0VDD5 57 aa10.6□□□□□ -0.71
SNX11-201ENST00000359238 UQCR11O14957 56 aa10.58□□□□□ -0.72
SNX11-201ENST00000359238 KRTAP17-1Q9BYP8 105 aa10.58□□□□□ -0.72
SNX11-201ENST00000359238 FAM229AH3BQW9 127 aa10.56□□□□□ -0.72
SNX11-201ENST00000359238 TYMSOSQ8TAI1 123 aa10.56□□□□□ -0.72
SNX11-201ENST00000359238 Q5VSD8 79 aa10.55□□□□□ -0.72
SNX11-201ENST00000359238 IGKV2-30P06310 120 aa10.49□□□□□ -0.73
SNX11-201ENST00000359238 RETNLBQ9BQ08 111 aa10.47□□□□□ -0.73
SNX11-201ENST00000359238 TNXBP22105 4242 aa10.46□□□□□ -0.74
SNX11-201ENST00000359238 H3BS24 57 aa10.45□□□□□ -0.74
SNX11-201ENST00000359238 CSAG1Q6PB30 78 aa10.45□□□□□ -0.74
SNX11-201ENST00000359238 MYCBP2O75592 4640 aa10.43□□□□□ -0.74
SNX11-201ENST00000359238 LINC00304Q8N9R0 145 aa10.42□□□□□ -0.74
SNX11-201ENST00000359238 FAT3Q8TDW7 4589 aa10.4□□□□□ -0.74
SNX11-201ENST00000359238 SPINK1P00995 79 aa10.38□□□□□ -0.75
SNX11-201ENST00000359238 FLG2Q5D862 2391 aaPredicted RBP10.37□□□□□ -0.75
SNX11-201ENST00000359238 Q8N1X5 172 aa10.36□□□□□ -0.75
SNX11-201ENST00000359238 IGKV2D-30A0A075B6S6 120 aa10.27□□□□□ -0.77
SNX11-201ENST00000359238 KRTAP16-1A8MUX0 517 aa10.27□□□□□ -0.77
SNX11-201ENST00000359238 RPS29P62273 56 aaKnown RBP10.26□□□□□ -0.77
SNX11-201ENST00000359238 KRTAP10-8P60410 259 aa10.24□□□□□ -0.77
SNX11-201ENST00000359238 KRTAP4-5Q9BYR2 181 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms