RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 C8orf17Q9NRJ1 99 aa14.07□□□□□ -0.16
USP25-203ENST00000351097 TP53AIP1Q9HCN2 124 aa14.05□□□□□ -0.16
USP25-203ENST00000351097 ANAPC11Q9NYG5 84 aa14.05□□□□□ -0.16
USP25-203ENST00000351097 BRK1Q8WUW1 75 aa14.03□□□□□ -0.16
USP25-203ENST00000351097 A0A1B0GVX0 72 aa14.03□□□□□ -0.16
USP25-203ENST00000351097 LRP1BQ9NZR2 4599 aa14.02□□□□□ -0.17
USP25-203ENST00000351097 IGHV6-1A0A0B4J1U7 121 aa14□□□□□ -0.17
USP25-203ENST00000351097 CDK2AP2O75956 126 aa14□□□□□ -0.17
USP25-203ENST00000351097 PKHD1P08F94 4074 aa13.94□□□□□ -0.18
USP25-203ENST00000351097 MRPL34Q9BQ48 92 aaKnown RBP13.92□□□□□ -0.18
USP25-203ENST00000351097 IGLV7-46A0A075B6I9 117 aa13.92□□□□□ -0.18
USP25-203ENST00000351097 NDUFS5O43920 106 aa13.92□□□□□ -0.18
USP25-203ENST00000351097 V9GYY9 64 aa13.91□□□□□ -0.18
USP25-203ENST00000351097 RYR2Q92736 4967 aa13.9□□□□□ -0.18
USP25-203ENST00000351097 PSPHP1O15172 72 aa13.88□□□□□ -0.19
USP25-203ENST00000351097 PCOTHQ58A44 107 aa13.86□□□□□ -0.19
USP25-203ENST00000351097 A0A087X002 238 aa13.86□□□□□ -0.19
USP25-203ENST00000351097 NOTCH2NLQ7Z3S9 236 aa13.86□□□□□ -0.19
USP25-203ENST00000351097 CD164Q04900 197 aa13.85□□□□□ -0.19
USP25-203ENST00000351097 VPS13BQ7Z7G8 4022 aa13.85□□□□□ -0.19
USP25-203ENST00000351097 A0A1B0GVY2 172 aa13.84□□□□□ -0.19
USP25-203ENST00000351097 KMT2CQ8NEZ4 4911 aaKnown RBP13.84□□□□□ -0.19
USP25-203ENST00000351097 SPINK6Q6UWN8 80 aa13.81□□□□□ -0.2
USP25-203ENST00000351097 COA5Q86WW8 74 aa13.81□□□□□ -0.2
USP25-203ENST00000351097 DYNC1H1Q14204 4646 aaKnown RBP13.8□□□□□ -0.2
USP25-203ENST00000351097 C1orf195Q5TG92 126 aa13.79□□□□□ -0.2
USP25-203ENST00000351097 SSBP3-AS1Q7Z2R9 100 aa13.79□□□□□ -0.2
USP25-203ENST00000351097 A8MUN3 132 aa13.78□□□□□ -0.2
USP25-203ENST00000351097 Q8N9P0 234 aaPredicted RBP13.78□□□□□ -0.2
USP25-203ENST00000351097 LIMD2Q9BT23 127 aa13.76□□□□□ -0.21
USP25-203ENST00000351097 KRTAP1-4P0C5Y4 121 aa13.72□□□□□ -0.21
USP25-203ENST00000351097 KRTAP13-2Q52LG2 175 aa13.72□□□□□ -0.21
USP25-203ENST00000351097 Q5VV11 94 aa13.72□□□□□ -0.21
USP25-203ENST00000351097 LOC101927531A0A1B0GV80 90 aa13.69□□□□□ -0.22
USP25-203ENST00000351097 C8orf87E5RJ46 101 aa13.68□□□□□ -0.22
USP25-203ENST00000351097 KRTAP13-3Q3SY46 172 aa13.65□□□□□ -0.22
USP25-203ENST00000351097 Q5W150 140 aa13.65□□□□□ -0.22
USP25-203ENST00000351097 PRR15LQ9BU68 103 aa13.65□□□□□ -0.22
USP25-203ENST00000351097 APOBP04114 4563 aaKnown RBP13.63□□□□□ -0.23
USP25-203ENST00000351097 SMR3BP02814 79 aaPredicted RBP13.63□□□□□ -0.23
USP25-203ENST00000351097 HRES1P13985 223 aa13.59□□□□□ -0.23
USP25-203ENST00000351097 CHKB-CPT1BH3BT56 60 aa13.58□□□□□ -0.24
USP25-203ENST00000351097 PLA2G1BP04054 148 aaKnown RBP13.58□□□□□ -0.24
USP25-203ENST00000351097 LINC00313P59037 77 aa13.56□□□□□ -0.24
USP25-203ENST00000351097 Q75L30 129 aa13.54□□□□□ -0.24
USP25-203ENST00000351097 FAT1Q14517 4588 aa13.52□□□□□ -0.25
USP25-203ENST00000351097 KRTAP10-4P60372 401 aaPredicted RBP13.51□□□□□ -0.25
USP25-203ENST00000351097 SPAG11AQ6PDA7 123 aa13.5□□□□□ -0.25
USP25-203ENST00000351097 LINC01558Q9Y6Z2 57 aa13.5□□□□□ -0.25
USP25-203ENST00000351097 RYR3Q15413 4870 aa13.49□□□□□ -0.25
USP25-203ENST00000351097 FAM229AH3BQW9 127 aa13.48□□□□□ -0.25
USP25-203ENST00000351097 TYMSOSQ8TAI1 123 aa13.47□□□□□ -0.25
USP25-203ENST00000351097 A8MU10 97 aa13.44□□□□□ -0.26
USP25-203ENST00000351097 PRR26Q8N8Z3 221 aa13.42□□□□□ -0.26
USP25-203ENST00000351097 A6NED7 52 aa13.41□□□□□ -0.26
USP25-203ENST00000351097 ACYP2P14621 99 aa13.39□□□□□ -0.27
USP25-203ENST00000351097 KRTAP16-1A8MUX0 517 aa13.38□□□□□ -0.27
USP25-203ENST00000351097 C4orf48Q5BLP8 95 aa13.38□□□□□ -0.27
USP25-203ENST00000351097 RETNLBQ9BQ08 111 aa13.37□□□□□ -0.27
USP25-203ENST00000351097 IGKV2-30P06310 120 aa13.36□□□□□ -0.27
USP25-203ENST00000351097 SPINK1P00995 79 aa13.35□□□□□ -0.27
USP25-203ENST00000351097 DMAC1Q96GE9 116 aa13.35□□□□□ -0.27
USP25-203ENST00000351097 LCA10Q71F78 164 aa13.34□□□□□ -0.27
USP25-203ENST00000351097 LINC00304Q8N9R0 145 aa13.31□□□□□ -0.28
USP25-203ENST00000351097 CDC42SE1Q9NRR8 79 aa13.28□□□□□ -0.28
USP25-203ENST00000351097 PMAIP1Q13794 54 aa13.26□□□□□ -0.29
USP25-203ENST00000351097 ATP11AUNQ6ZP68 121 aa13.24□□□□□ -0.29
USP25-203ENST00000351097 RPS29P62273 56 aaKnown RBP13.24□□□□□ -0.29
USP25-203ENST00000351097 PKHD1L1Q86WI1 4243 aa13.22□□□□□ -0.29
USP25-203ENST00000351097 SPTSSBQ8NFR3 76 aa13.22□□□□□ -0.29
USP25-203ENST00000351097 HSPG2P98160 4391 aa13.21□□□□□ -0.29
USP25-203ENST00000351097 SPINK7P58062 85 aa13.2□□□□□ -0.3
USP25-203ENST00000351097 RYR1P21817 5038 aa13.17□□□□□ -0.3
USP25-203ENST00000351097 IGKV2D-30A0A075B6S6 120 aa13.17□□□□□ -0.3
USP25-203ENST00000351097 Q5VSD8 79 aa13.14□□□□□ -0.31
USP25-203ENST00000351097 KRTAP17-1Q9BYP8 105 aa13.05□□□□□ -0.32
USP25-203ENST00000351097 C7orf65Q6ZTY9 151 aa13.04□□□□□ -0.32
USP25-203ENST00000351097 A6NN06 94 aa13.03□□□□□ -0.32
USP25-203ENST00000351097 KIAA1109Q2LD37 5005 aa13.02□□□□□ -0.32
USP25-203ENST00000351097 A0A1B0GU69 56 aa13.01□□□□□ -0.33
USP25-203ENST00000351097 LRP1Q07954 4544 aaKnown RBP13.01□□□□□ -0.33
USP25-203ENST00000351097 EPPK1P58107 5090 aaKnown RBP13□□□□□ -0.33
USP25-203ENST00000351097 KTN1-AS1Q86SY8 53 aa12.98□□□□□ -0.33
USP25-203ENST00000351097 TNXBP22105 4242 aa12.97□□□□□ -0.33
USP25-203ENST00000351097 KRTAP10-8P60410 259 aa12.96□□□□□ -0.34
USP25-203ENST00000351097 Q8N1X5 172 aa12.95□□□□□ -0.34
USP25-203ENST00000351097 FLG2Q5D862 2391 aaPredicted RBP12.9□□□□□ -0.34
USP25-203ENST00000351097 FAT3Q8TDW7 4589 aa12.86□□□□□ -0.35
USP25-203ENST00000351097 SEC61GP60059 68 aa12.84□□□□□ -0.35
USP25-203ENST00000351097 C9orf92A6NGG3 77 aa12.84□□□□□ -0.35
USP25-203ENST00000351097 A8MUU9 505 aa12.81□□□□□ -0.36
USP25-203ENST00000351097 C20orf166-AS1Q96NR2 134 aa12.81□□□□□ -0.36
USP25-203ENST00000351097 SPATA8Q6RVD6 105 aa12.81□□□□□ -0.36
USP25-203ENST00000351097 UQCR11O14957 56 aa12.79□□□□□ -0.36
USP25-203ENST00000351097 MYCBP2O75592 4640 aa12.76□□□□□ -0.37
USP25-203ENST00000351097 MIR22HGQ0VDD5 57 aa12.74□□□□□ -0.37
USP25-203ENST00000351097 MT1HL1P0DM35 61 aa12.71□□□□□ -0.37
USP25-203ENST00000351097 DMBT1Q9UGM3 2413 aaPredicted RBP12.65□□□□□ -0.39
USP25-203ENST00000351097 RBM12B-AS1Q9P1G2 102 aa12.61□□□□□ -0.39
USP25-203ENST00000351097 KRTAP3-1Q9BYR8 98 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms