RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 LINC00472Q9H8W2 130 aa8.51□□□□□ -1.05
PDPK1-202ENST00000342085 Q8NDZ9 215 aa8.5□□□□□ -1.05
PDPK1-202ENST00000342085 Q6ZR54 194 aa8.5□□□□□ -1.05
PDPK1-202ENST00000342085 UNC79Q9P2D8 2635 aa8.49□□□□□ -1.05
PDPK1-202ENST00000342085 SPRR1AP35321 89 aa8.49□□□□□ -1.05
PDPK1-202ENST00000342085 ITPR2Q14571 2701 aa8.49□□□□□ -1.05
PDPK1-202ENST00000342085 A8MUU9 505 aa8.49□□□□□ -1.05
PDPK1-202ENST00000342085 UBR5O95071 2799 aaPredicted RBP8.49□□□□□ -1.05
PDPK1-202ENST00000342085 SPRR1BP22528 89 aa8.48□□□□□ -1.05
PDPK1-202ENST00000342085 FLNCQ14315 2725 aa8.47□□□□□ -1.05
PDPK1-202ENST00000342085 PANO1I0J062 215 aa8.46□□□□□ -1.05
PDPK1-202ENST00000342085 NOTCH1P46531 2555 aa8.46□□□□□ -1.05
PDPK1-202ENST00000342085 CELSR2Q9HCU4 2923 aa8.46□□□□□ -1.06
PDPK1-202ENST00000342085 A0A087X002 238 aa8.45□□□□□ -1.06
PDPK1-202ENST00000342085 KRTAP26-1Q6PEX3 210 aa8.44□□□□□ -1.06
PDPK1-202ENST00000342085 NBEAL1Q6ZS30 2694 aa8.44□□□□□ -1.06
PDPK1-202ENST00000342085 DMBT1Q9UGM3 2413 aaPredicted RBP8.43□□□□□ -1.06
PDPK1-202ENST00000342085 H3BS24 57 aa8.36□□□□□ -1.07
PDPK1-202ENST00000342085 HIVEP1P15822 2718 aa8.34□□□□□ -1.07
PDPK1-202ENST00000342085 CELSR1Q9NYQ6 3014 aa8.33□□□□□ -1.08
PDPK1-202ENST00000342085 DCHS2Q6V1P9 2916 aa8.32□□□□□ -1.08
PDPK1-202ENST00000342085 Q5VV11 94 aa8.32□□□□□ -1.08
PDPK1-202ENST00000342085 STAB2Q8WWQ8 2551 aa8.31□□□□□ -1.08
PDPK1-202ENST00000342085 TNP1P09430 55 aa8.29□□□□□ -1.08
PDPK1-202ENST00000342085 ZANQ9Y493 2812 aa8.28□□□□□ -1.08
PDPK1-202ENST00000342085 FBN2P35556 2912 aa8.27□□□□□ -1.09
PDPK1-202ENST00000342085 NIPBLQ6KC79 2804 aaeCLIP8.27□□□□□ -1.09
PDPK1-202ENST00000342085 KRTAP10-8P60410 259 aa8.26□□□□□ -1.09
PDPK1-202ENST00000342085 A0A1B0GVY2 172 aa8.26□□□□□ -1.09
PDPK1-202ENST00000342085 C10orf95Q9H7T3 257 aa8.22□□□□□ -1.09
PDPK1-202ENST00000342085 A8MU10 97 aa8.2□□□□□ -1.1
PDPK1-202ENST00000342085 NSD1Q96L73 2696 aaPredicted RBP8.18□□□□□ -1.1
PDPK1-202ENST00000342085 APCP25054 2843 aa8.18□□□□□ -1.1
PDPK1-202ENST00000342085 VPS13CQ709C8 3753 aa8.16□□□□□ -1.1
PDPK1-202ENST00000342085 NOTCH2NLQ7Z3S9 236 aa8.16□□□□□ -1.1
PDPK1-202ENST00000342085 RPS29P62273 56 aaKnown RBP8.16□□□□□ -1.1
PDPK1-202ENST00000342085 BSNQ9UPA5 3926 aa8.14□□□□□ -1.11
PDPK1-202ENST00000342085 NF1P21359 2839 aa8.09□□□□□ -1.11
PDPK1-202ENST00000342085 KRTAP16-1A8MUX0 517 aa8.09□□□□□ -1.12
PDPK1-202ENST00000342085 KRTAP10-10P60014 251 aa8.08□□□□□ -1.12
PDPK1-202ENST00000342085 HRNRQ86YZ3 2850 aaPredicted RBP8.07□□□□□ -1.12
PDPK1-202ENST00000342085 CYSTM1Q9H1C7 97 aa8.05□□□□□ -1.12
PDPK1-202ENST00000342085 TENM4Q6N022 2769 aa8.05□□□□□ -1.12
PDPK1-202ENST00000342085 Q5XG85 94 aa8.03□□□□□ -1.12
PDPK1-202ENST00000342085 KRTAP13-2Q52LG2 175 aa8.03□□□□□ -1.12
PDPK1-202ENST00000342085 KRTAP11-1Q8IUC1 163 aa8.02□□□□□ -1.13
PDPK1-202ENST00000342085 KMT2BQ9UMN6 2715 aaPredicted RBP8.02□□□□□ -1.13
PDPK1-202ENST00000342085 P0C880 135 aa8.02□□□□□ -1.13
PDPK1-202ENST00000342085 KRTAP21-3Q3LHN1 58 aa8.01□□□□□ -1.13
PDPK1-202ENST00000342085 KRTAP4-16G5E9R7 235 aaPredicted RBP8.01□□□□□ -1.13
PDPK1-202ENST00000342085 ASB16-AS1Q495Z4 193 aa8□□□□□ -1.13
PDPK1-202ENST00000342085 Q6ZRN7 208 aaPredicted RBP8□□□□□ -1.13
PDPK1-202ENST00000342085 PRO2289Q9P1D8 64 aa7.99□□□□□ -1.13
PDPK1-202ENST00000342085 PKD1L1Q8TDX9 2849 aa7.96□□□□□ -1.14
PDPK1-202ENST00000342085 KRTAP29-1A8MX34 341 aaPredicted RBP7.95□□□□□ -1.14
PDPK1-202ENST00000342085 KRTAP25-1Q3LHN0 102 aa7.95□□□□□ -1.14
PDPK1-202ENST00000342085 NDUFAF8A1L188 74 aa7.9□□□□□ -1.14
PDPK1-202ENST00000342085 VWFP04275 2813 aa7.83□□□□□ -1.16
PDPK1-202ENST00000342085 XP32Q5T750 250 aa7.81□□□□□ -1.16
PDPK1-202ENST00000342085 TENM1Q9UKZ4 2725 aa7.77□□□□□ -1.17
PDPK1-202ENST00000342085 TRRAPQ9Y4A5 3859 aa7.77□□□□□ -1.17
PDPK1-202ENST00000342085 FBN1P35555 2871 aaKnown RBP7.75□□□□□ -1.17
PDPK1-202ENST00000342085 PP632Q6XCG6 107 aa7.74□□□□□ -1.17
PDPK1-202ENST00000342085 KRTAP7-1Q8IUC3 87 aa7.71□□□□□ -1.17
PDPK1-202ENST00000342085 MXRA5Q9NR99 2828 aa7.7□□□□□ -1.18
PDPK1-202ENST00000342085 KRTAP13-1Q8IUC0 172 aa7.69□□□□□ -1.18
PDPK1-202ENST00000342085 ZNF469Q96JG9 3925 aaPredicted RBP7.69□□□□□ -1.18
PDPK1-202ENST00000342085 TPRXLQ17RH7 258 aa7.69□□□□□ -1.18
PDPK1-202ENST00000342085 TENM2Q9NT68 2774 aa7.67□□□□□ -1.18
PDPK1-202ENST00000342085 PDZD2O15018 2839 aa7.65□□□□□ -1.19
PDPK1-202ENST00000342085 CSMD3Q7Z407 3707 aa7.61□□□□□ -1.19
PDPK1-202ENST00000342085 A6NN06 94 aa7.56□□□□□ -1.2
PDPK1-202ENST00000342085 OTOGQ6ZRI0 2925 aa7.51□□□□□ -1.21
PDPK1-202ENST00000342085 KRTAP1-4P0C5Y4 121 aa7.48□□□□□ -1.21
PDPK1-202ENST00000342085 TGP01266 2768 aa7.47□□□□□ -1.21
PDPK1-202ENST00000342085 TENM3Q9P273 2699 aa7.47□□□□□ -1.21
PDPK1-202ENST00000342085 KRTAP13-3Q3SY46 172 aa7.42□□□□□ -1.22
PDPK1-202ENST00000342085 SRRM2Q9UQ35 2752 aaKnown RBP7.36□□□□□ -1.23
PDPK1-202ENST00000342085 COL7A1Q02388 2944 aa7.34□□□□□ -1.23
PDPK1-202ENST00000342085 ANK3Q12955 4377 aaKnown RBP7.34□□□□□ -1.23
PDPK1-202ENST00000342085 AKAP9Q99996 3911 aa7.31□□□□□ -1.24
PDPK1-202ENST00000342085 H0YAA0 97 aa7.3□□□□□ -1.24
PDPK1-202ENST00000342085 KRTAP12-2P59991 146 aa7.23□□□□□ -1.25
PDPK1-202ENST00000342085 CRCT1Q9UGL9 99 aa7.2□□□□□ -1.26
PDPK1-202ENST00000342085 KRTAP15-1Q3LI76 137 aa7.15□□□□□ -1.26
PDPK1-202ENST00000342085 MEGF8Q7Z7M0 2845 aa7.05□□□□□ -1.28
PDPK1-202ENST00000342085 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
PDPK1-202ENST00000342085 FBN3Q75N90 2809 aa6.95□□□□□ -1.3
PDPK1-202ENST00000342085 HUWE1Q7Z6Z7 4374 aaKnown RBP6.86□□□□□ -1.31
PDPK1-202ENST00000342085 KRTAP12-1P59990 96 aa6.79□□□□□ -1.32
PDPK1-202ENST00000342085 KRTAP10-12P60413 245 aa6.69□□□□□ -1.34
PDPK1-202ENST00000342085 KRTAP4-5Q9BYR2 181 aa6.67□□□□□ -1.34
PDPK1-202ENST00000342085 LYSTQ99698 3801 aa6.65□□□□□ -1.34
PDPK1-202ENST00000342085 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
PDPK1-202ENST00000342085 KMT2AQ03164 3969 aa6.59□□□□□ -1.35
PDPK1-202ENST00000342085 ANK2Q01484 3957 aa6.57□□□□□ -1.36
PDPK1-202ENST00000342085 KRTAP10-6P60371 365 aaPredicted RBP6.49□□□□□ -1.37
PDPK1-202ENST00000342085 DNAH10Q8IVF4 4471 aa6.48□□□□□ -1.37
PDPK1-202ENST00000342085 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
PDPK1-202ENST00000342085 KRTAP8-1Q8IUC2 63 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms