RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 SCGB1A1P11684 91 aa9.96□□□□□ -0.82
SDCBP2-201ENST00000339987 DEFB116Q30KQ4 102 aa9.96□□□□□ -0.82
SDCBP2-201ENST00000339987 BPY2O14599 106 aa9.95□□□□□ -0.82
SDCBP2-201ENST00000339987 HIST1H4AP62805 103 aaKnown RBP9.91□□□□□ -0.82
SDCBP2-201ENST00000339987 TPRXLQ17RH7 258 aa9.91□□□□□ -0.82
SDCBP2-201ENST00000339987 KRTAP13-3Q3SY46 172 aa9.9□□□□□ -0.83
SDCBP2-201ENST00000339987 A8MWP4 228 aa9.87□□□□□ -0.83
SDCBP2-201ENST00000339987 DSCR10P59022 87 aa9.86□□□□□ -0.83
SDCBP2-201ENST00000339987 A0A1B0GVX0 72 aa9.85□□□□□ -0.83
SDCBP2-201ENST00000339987 NDUFB1O75438 58 aa9.85□□□□□ -0.83
SDCBP2-201ENST00000339987 IGHV6-1A0A0B4J1U7 121 aa9.82□□□□□ -0.84
SDCBP2-201ENST00000339987 C9orf92A6NGG3 77 aa9.82□□□□□ -0.84
SDCBP2-201ENST00000339987 PRR15Q8IV56 129 aa9.82□□□□□ -0.84
SDCBP2-201ENST00000339987 FAM236AA0A1B0GUQ0 79 aa9.81□□□□□ -0.84
SDCBP2-201ENST00000339987 FAM236BA0A1B0GV22 79 aa9.81□□□□□ -0.84
SDCBP2-201ENST00000339987 C8orf87E5RJ46 101 aa9.81□□□□□ -0.84
SDCBP2-201ENST00000339987 A0A087WVE0 104 aa9.79□□□□□ -0.84
SDCBP2-201ENST00000339987 K7EQZ3 153 aa9.78□□□□□ -0.84
SDCBP2-201ENST00000339987 LINC00313P59037 77 aa9.78□□□□□ -0.84
SDCBP2-201ENST00000339987 XP32Q5T750 250 aa9.75□□□□□ -0.85
SDCBP2-201ENST00000339987 NOTCH2NLQ7Z3S9 236 aa9.75□□□□□ -0.85
SDCBP2-201ENST00000339987 Q8N9L7 120 aa9.75□□□□□ -0.85
SDCBP2-201ENST00000339987 ATOX1O00244 68 aa9.74□□□□□ -0.85
SDCBP2-201ENST00000339987 C8orf17Q9NRJ1 99 aa9.74□□□□□ -0.85
SDCBP2-201ENST00000339987 ANAPC13Q9BS18 74 aa9.73□□□□□ -0.85
SDCBP2-201ENST00000339987 KRTAP16-1A8MUX0 517 aa9.72□□□□□ -0.85
SDCBP2-201ENST00000339987 PCP4P48539 62 aa9.72□□□□□ -0.85
SDCBP2-201ENST00000339987 LPAP08519 4548 aa9.71□□□□□ -0.85
SDCBP2-201ENST00000339987 MMP24-AS1A0A0U1RRL7 71 aa9.71□□□□□ -0.86
SDCBP2-201ENST00000339987 RNF213Q63HN8 5207 aa9.7□□□□□ -0.86
SDCBP2-201ENST00000339987 HCG22E2RYF7 251 aa9.67□□□□□ -0.86
SDCBP2-201ENST00000339987 C20orf166-AS1Q96NR2 134 aa9.67□□□□□ -0.86
SDCBP2-201ENST00000339987 Q75L30 129 aa9.66□□□□□ -0.86
SDCBP2-201ENST00000339987 SMIM20Q8N5G0 67 aa9.66□□□□□ -0.86
SDCBP2-201ENST00000339987 LRP2P98164 4655 aa9.66□□□□□ -0.86
SDCBP2-201ENST00000339987 A8MUU9 505 aa9.65□□□□□ -0.86
SDCBP2-201ENST00000339987 hDV103S1A0JD37 113 aa9.65□□□□□ -0.87
SDCBP2-201ENST00000339987 RPL37P61927 97 aaKnown RBP9.65□□□□□ -0.87
SDCBP2-201ENST00000339987 TMEM254Q8TBM7 123 aa9.65□□□□□ -0.87
SDCBP2-201ENST00000339987 CASC2Q6XLA1 102 aa9.62□□□□□ -0.87
SDCBP2-201ENST00000339987 WFDC13Q8IUB5 93 aa9.61□□□□□ -0.87
SDCBP2-201ENST00000339987 Q8N9P0 234 aaPredicted RBP9.61□□□□□ -0.87
SDCBP2-201ENST00000339987 MRPL34Q9BQ48 92 aaKnown RBP9.61□□□□□ -0.87
SDCBP2-201ENST00000339987 SEC61BP60468 96 aaKnown RBP9.58□□□□□ -0.88
SDCBP2-201ENST00000339987 SERP2Q8N6R1 65 aa9.58□□□□□ -0.88
SDCBP2-201ENST00000339987 TRAV7A0A075B6U4 112 aa9.56□□□□□ -0.88
SDCBP2-201ENST00000339987 UQCRQO14949 82 aa9.53□□□□□ -0.88
SDCBP2-201ENST00000339987 COX7CP15954 63 aa9.53□□□□□ -0.88
SDCBP2-201ENST00000339987 ATP11AUNQ6ZP68 121 aa9.53□□□□□ -0.88
SDCBP2-201ENST00000339987 MUC17Q685J3 4493 aa9.52□□□□□ -0.89
SDCBP2-201ENST00000339987 PCOTHQ58A44 107 aa9.51□□□□□ -0.89
SDCBP2-201ENST00000339987 NDUFS5O43920 106 aa9.49□□□□□ -0.89
SDCBP2-201ENST00000339987 OCR1Q9BZK8 76 aa9.48□□□□□ -0.89
SDCBP2-201ENST00000339987 ZCCHC13Q8WW36 166 aaKnown RBP9.47□□□□□ -0.89
SDCBP2-201ENST00000339987 TP53AIP1Q9HCN2 124 aa9.44□□□□□ -0.9
SDCBP2-201ENST00000339987 CCDC179H3BU77 68 aa9.42□□□□□ -0.9
SDCBP2-201ENST00000339987 C5orf47Q569G3 176 aa9.4□□□□□ -0.9
SDCBP2-201ENST00000339987 MP68P56378 58 aa9.39□□□□□ -0.91
SDCBP2-201ENST00000339987 C20orf197Q8N268 126 aa9.37□□□□□ -0.91
SDCBP2-201ENST00000339987 KRTAP4-1Q9BYQ7 146 aa9.37□□□□□ -0.91
SDCBP2-201ENST00000339987 Q5W150 140 aa9.36□□□□□ -0.91
SDCBP2-201ENST00000339987 TRAV22A0A0B4J277 110 aa9.32□□□□□ -0.92
SDCBP2-201ENST00000339987 H0Y9P7 68 aa9.31□□□□□ -0.92
SDCBP2-201ENST00000339987 H3BPC8 53 aa9.31□□□□□ -0.92
SDCBP2-201ENST00000339987 KLKP1Q107X0 134 aa9.31□□□□□ -0.92
SDCBP2-201ENST00000339987 NDUFC1O43677 76 aa9.29□□□□□ -0.92
SDCBP2-201ENST00000339987 SNURFQ9Y675 71 aa9.28□□□□□ -0.92
SDCBP2-201ENST00000339987 A0A0U1RQV1 116 aa9.27□□□□□ -0.93
SDCBP2-201ENST00000339987 SPINK7P58062 85 aa9.26□□□□□ -0.93
SDCBP2-201ENST00000339987 LINC00208Q96KT6 92 aa9.24□□□□□ -0.93
SDCBP2-201ENST00000339987 C7orf65Q6ZTY9 151 aa9.22□□□□□ -0.93
SDCBP2-201ENST00000339987 C1orf64Q8NEQ6 169 aa9.22□□□□□ -0.93
SDCBP2-201ENST00000339987 IGKV2-30P06310 120 aa9.21□□□□□ -0.94
SDCBP2-201ENST00000339987 IGKV2D-30A0A075B6S6 120 aa9.2□□□□□ -0.94
SDCBP2-201ENST00000339987 LOC101927531A0A1B0GV80 90 aa9.18□□□□□ -0.94
SDCBP2-201ENST00000339987 HRES1P13985 223 aa9.18□□□□□ -0.94
SDCBP2-201ENST00000339987 TMEM258P61165 79 aa9.18□□□□□ -0.94
SDCBP2-201ENST00000339987 KRTAP9-2Q9BYQ4 174 aa9.18□□□□□ -0.94
SDCBP2-201ENST00000339987 MUC2Q02817 5179 aa9.16□□□□□ -0.94
SDCBP2-201ENST00000339987 CYSTM1Q9H1C7 97 aa9.15□□□□□ -0.94
SDCBP2-201ENST00000339987 H7BZZ5 65 aa9.14□□□□□ -0.95
SDCBP2-201ENST00000339987 MPLKIPQ8TAP9 179 aa9.14□□□□□ -0.95
SDCBP2-201ENST00000339987 CYP4F30PQ9H0H9 118 aa9.12□□□□□ -0.95
SDCBP2-201ENST00000339987 ATP5EP56381 51 aaPredicted RBP9.11□□□□□ -0.95
SDCBP2-201ENST00000339987 KRTAP19-2Q3LHN2 52 aa9.1□□□□□ -0.95
SDCBP2-201ENST00000339987 FAM236DA0A1B0GTK5 79 aa9.08□□□□□ -0.96
SDCBP2-201ENST00000339987 FAM236CP0DP71 79 aa9.08□□□□□ -0.96
SDCBP2-201ENST00000339987 RBM12B-AS1Q9P1G2 102 aa9.08□□□□□ -0.96
SDCBP2-201ENST00000339987 FAT4Q6V0I7 4981 aa9.08□□□□□ -0.96
SDCBP2-201ENST00000339987 KRTAP9-6A0A140TA67 174 aa9.02□□□□□ -0.97
SDCBP2-201ENST00000339987 LCE2CQ5TA81 110 aa9.02□□□□□ -0.97
SDCBP2-201ENST00000339987 COX6B2Q6YFQ2 88 aa9.02□□□□□ -0.97
SDCBP2-201ENST00000339987 SPANXA2-OT1Q8N9U9 137 aa9.02□□□□□ -0.97
SDCBP2-201ENST00000339987 C4orf26Q17RF5 130 aa8.98□□□□□ -0.97
SDCBP2-201ENST00000339987 LCE2AQ5TA79 106 aaPredicted RBP8.94□□□□□ -0.98
SDCBP2-201ENST00000339987 KRTAP3-1Q9BYR8 98 aa8.88□□□□□ -0.99
SDCBP2-201ENST00000339987 SERP1Q9Y6X1 66 aa8.88□□□□□ -0.99
SDCBP2-201ENST00000339987 H1FX-AS1Q4G0G2 97 aa8.88□□□□□ -0.99
SDCBP2-201ENST00000339987 MT1HP80294 61 aa8.87□□□□□ -0.99
SDCBP2-201ENST00000339987 FLGP20930 4061 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms