RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 PSORS1C2Q9UIG4 136 aa9.99□□□□□ -0.81
CDC42EP4-201ENST00000335793 DNAH3Q8TD57 4116 aa9.98□□□□□ -0.81
CDC42EP4-201ENST00000335793 A0A087WTM6 91 aa9.97□□□□□ -0.81
CDC42EP4-201ENST00000335793 RTL8CO15255 209 aa9.97□□□□□ -0.81
CDC42EP4-201ENST00000335793 SPACA4Q8TDM5 124 aa9.97□□□□□ -0.81
CDC42EP4-201ENST00000335793 ZNF706Q9Y5V0 76 aaPredicted RBP9.97□□□□□ -0.81
CDC42EP4-201ENST00000335793 C8orf17Q9NRJ1 99 aa9.97□□□□□ -0.81
CDC42EP4-201ENST00000335793 IGLV7-46A0A075B6I9 117 aa9.96□□□□□ -0.82
CDC42EP4-201ENST00000335793 RETNLBQ9BQ08 111 aa9.96□□□□□ -0.82
CDC42EP4-201ENST00000335793 Q6ZRN7 208 aaPredicted RBP9.95□□□□□ -0.82
CDC42EP4-201ENST00000335793 KRTAP13-1Q8IUC0 172 aa9.94□□□□□ -0.82
CDC42EP4-201ENST00000335793 CIRBP-AS1Q8TBR5 109 aa9.94□□□□□ -0.82
CDC42EP4-201ENST00000335793 HRES1P13985 223 aa9.92□□□□□ -0.82
CDC42EP4-201ENST00000335793 CSAG1Q6PB30 78 aa9.92□□□□□ -0.82
CDC42EP4-201ENST00000335793 TP53AIP1Q9HCN2 124 aa9.92□□□□□ -0.82
CDC42EP4-201ENST00000335793 IGLV5-52A0A0A0MRZ9 124 aa9.92□□□□□ -0.82
CDC42EP4-201ENST00000335793 A0A1B0GVX0 72 aa9.91□□□□□ -0.82
CDC42EP4-201ENST00000335793 ZNF861PO60384 105 aa9.89□□□□□ -0.83
CDC42EP4-201ENST00000335793 Q96NJ1 140 aa9.88□□□□□ -0.83
CDC42EP4-201ENST00000335793 WWC2-AS2Q96NR7 200 aa9.88□□□□□ -0.83
CDC42EP4-201ENST00000335793 MRPL34Q9BQ48 92 aaKnown RBP9.88□□□□□ -0.83
CDC42EP4-201ENST00000335793 PLECQ15149 4684 aaKnown RBP9.87□□□□□ -0.83
CDC42EP4-201ENST00000335793 DNAH7Q8WXX0 4024 aa9.87□□□□□ -0.83
CDC42EP4-201ENST00000335793 A0A087X002 238 aa9.87□□□□□ -0.83
CDC42EP4-201ENST00000335793 NOTCH2NLQ7Z3S9 236 aa9.87□□□□□ -0.83
CDC42EP4-201ENST00000335793 LY6G6CO95867 125 aa9.85□□□□□ -0.83
CDC42EP4-201ENST00000335793 FLG2Q5D862 2391 aaPredicted RBP9.83□□□□□ -0.84
CDC42EP4-201ENST00000335793 PLA2G1BP04054 148 aaKnown RBP9.82□□□□□ -0.84
CDC42EP4-201ENST00000335793 LINC00483Q53H64 154 aa9.82□□□□□ -0.84
CDC42EP4-201ENST00000335793 C1orf134Q5TEV5 83 aa9.82□□□□□ -0.84
CDC42EP4-201ENST00000335793 PLAC8Q9NZF1 115 aa9.82□□□□□ -0.84
CDC42EP4-201ENST00000335793 KRTAP21-3Q3LHN1 58 aa9.81□□□□□ -0.84
CDC42EP4-201ENST00000335793 Q6ZR54 194 aa9.8□□□□□ -0.84
CDC42EP4-201ENST00000335793 IGLV7-43P04211 117 aa9.76□□□□□ -0.85
CDC42EP4-201ENST00000335793 A0A1B0GU69 56 aa9.72□□□□□ -0.85
CDC42EP4-201ENST00000335793 ASB16-AS1Q495Z4 193 aa9.71□□□□□ -0.86
CDC42EP4-201ENST00000335793 Q5W150 140 aa9.71□□□□□ -0.86
CDC42EP4-201ENST00000335793 MIR22HGQ0VDD5 57 aa9.67□□□□□ -0.86
CDC42EP4-201ENST00000335793 STARD9Q9P2P6 4700 aa9.66□□□□□ -0.86
CDC42EP4-201ENST00000335793 FRAS1Q86XX4 4008 aa9.65□□□□□ -0.87
CDC42EP4-201ENST00000335793 SSBP3-AS1Q7Z2R9 100 aa9.63□□□□□ -0.87
CDC42EP4-201ENST00000335793 KMT2AQ03164 3969 aa9.61□□□□□ -0.87
CDC42EP4-201ENST00000335793 KRTAP10-2P60368 255 aa9.61□□□□□ -0.87
CDC42EP4-201ENST00000335793 ACYP2P14621 99 aa9.6□□□□□ -0.87
CDC42EP4-201ENST00000335793 CRIPTQ9P021 101 aa9.58□□□□□ -0.88
CDC42EP4-201ENST00000335793 DNAH8Q96JB1 4490 aa9.58□□□□□ -0.88
CDC42EP4-201ENST00000335793 IGKV2D-30A0A075B6S6 120 aa9.56□□□□□ -0.88
CDC42EP4-201ENST00000335793 IGKV2-30P06310 120 aa9.56□□□□□ -0.88
CDC42EP4-201ENST00000335793 UQCR11O14957 56 aa9.55□□□□□ -0.88
CDC42EP4-201ENST00000335793 VPS13DQ5THJ4 4388 aa9.54□□□□□ -0.88
CDC42EP4-201ENST00000335793 FAM229AH3BQW9 127 aa9.54□□□□□ -0.88
CDC42EP4-201ENST00000335793 SPATA8Q6RVD6 105 aa9.53□□□□□ -0.88
CDC42EP4-201ENST00000335793 DYNC2H1Q8NCM8 4307 aaKnown RBP9.52□□□□□ -0.89
CDC42EP4-201ENST00000335793 HECTD4Q9Y4D8 3996 aa9.5□□□□□ -0.89
CDC42EP4-201ENST00000335793 DNAH17Q9UFH2 4485 aa9.49□□□□□ -0.89
CDC42EP4-201ENST00000335793 DNAH2Q9P225 4427 aa9.49□□□□□ -0.89
CDC42EP4-201ENST00000335793 KRTAP13-2Q52LG2 175 aa9.48□□□□□ -0.89
CDC42EP4-201ENST00000335793 KRTAP10-1P60331 282 aa9.47□□□□□ -0.89
CDC42EP4-201ENST00000335793 ROMO1P60602 79 aa9.47□□□□□ -0.89
CDC42EP4-201ENST00000335793 SPINK1P00995 79 aa9.46□□□□□ -0.89
CDC42EP4-201ENST00000335793 KMT2CQ8NEZ4 4911 aaKnown RBP9.44□□□□□ -0.9
CDC42EP4-201ENST00000335793 KRTAP13-3Q3SY46 172 aa9.43□□□□□ -0.9
CDC42EP4-201ENST00000335793 TYMSOSQ8TAI1 123 aa9.43□□□□□ -0.9
CDC42EP4-201ENST00000335793 DNAH11Q96DT5 4516 aa9.42□□□□□ -0.9
CDC42EP4-201ENST00000335793 HYDINQ4G0P3 5121 aa9.41□□□□□ -0.9
CDC42EP4-201ENST00000335793 DMAC1Q96GE9 116 aa9.4□□□□□ -0.9
CDC42EP4-201ENST00000335793 DMBT1Q9UGM3 2413 aaPredicted RBP9.39□□□□□ -0.91
CDC42EP4-201ENST00000335793 DNAH6Q9C0G6 4158 aa9.38□□□□□ -0.91
CDC42EP4-201ENST00000335793 KRTAP25-1Q3LHN0 102 aa9.31□□□□□ -0.92
CDC42EP4-201ENST00000335793 Q8N1X5 172 aa9.31□□□□□ -0.92
CDC42EP4-201ENST00000335793 SMR3BP02814 79 aaPredicted RBP9.3□□□□□ -0.92
CDC42EP4-201ENST00000335793 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
CDC42EP4-201ENST00000335793 KRTAP1-4P0C5Y4 121 aa9.29□□□□□ -0.92
CDC42EP4-201ENST00000335793 P0C880 135 aa9.29□□□□□ -0.92
CDC42EP4-201ENST00000335793 KRTAP16-1A8MUX0 517 aa9.26□□□□□ -0.93
CDC42EP4-201ENST00000335793 Q6ZSA8 131 aa9.26□□□□□ -0.93
CDC42EP4-201ENST00000335793 A8MUU9 505 aa9.26□□□□□ -0.93
CDC42EP4-201ENST00000335793 DNAH5Q8TE73 4624 aa9.24□□□□□ -0.93
CDC42EP4-201ENST00000335793 C9orf92A6NGG3 77 aa9.24□□□□□ -0.93
CDC42EP4-201ENST00000335793 LINC00304Q8N9R0 145 aa9.23□□□□□ -0.93
CDC42EP4-201ENST00000335793 SACSQ9NZJ4 4579 aa9.23□□□□□ -0.93
CDC42EP4-201ENST00000335793 ALMS1Q8TCU4 4167 aa9.23□□□□□ -0.93
CDC42EP4-201ENST00000335793 RYR3Q15413 4870 aa9.19□□□□□ -0.94
CDC42EP4-201ENST00000335793 SPINT4Q6UDR6 99 aa9.16□□□□□ -0.94
CDC42EP4-201ENST00000335793 NDUFAF8A1L188 74 aa9.12□□□□□ -0.95
CDC42EP4-201ENST00000335793 VPS13BQ7Z7G8 4022 aa9.12□□□□□ -0.95
CDC42EP4-201ENST00000335793 A0A0A0MQY5 61 aa9.11□□□□□ -0.95
CDC42EP4-201ENST00000335793 RYR2Q92736 4967 aa9.08□□□□□ -0.96
CDC42EP4-201ENST00000335793 H0YAA0 97 aa9.08□□□□□ -0.96
CDC42EP4-201ENST00000335793 PKHD1P08F94 4074 aa9.05□□□□□ -0.96
CDC42EP4-201ENST00000335793 PKD1P98161 4303 aa8.95□□□□□ -0.98
CDC42EP4-201ENST00000335793 FAT2Q9NYQ8 4349 aa8.94□□□□□ -0.98
CDC42EP4-201ENST00000335793 A0A1B0GU33 70 aa8.93□□□□□ -0.98
CDC42EP4-201ENST00000335793 FAT1Q14517 4588 aa8.93□□□□□ -0.98
CDC42EP4-201ENST00000335793 EPPK1P58107 5090 aaKnown RBP8.93□□□□□ -0.98
CDC42EP4-201ENST00000335793 RPS29P62273 56 aaKnown RBP8.9□□□□□ -0.98
CDC42EP4-201ENST00000335793 C20orf166-AS1Q96NR2 134 aa8.88□□□□□ -0.99
CDC42EP4-201ENST00000335793 C10orf95Q9H7T3 257 aa8.88□□□□□ -0.99
CDC42EP4-201ENST00000335793 K7ERS5 55 aa8.87□□□□□ -0.99
CDC42EP4-201ENST00000335793 KIAA1109Q2LD37 5005 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms