RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 TPRXLQ17RH7 258 aa9.68□□□□□ -0.86
CHGA-202ENST00000334654 BPY2O14599 106 aa9.66□□□□□ -0.86
CHGA-202ENST00000334654 LRP2P98164 4655 aa9.66□□□□□ -0.86
CHGA-202ENST00000334654 IGKV4-1P06312 121 aa9.65□□□□□ -0.87
CHGA-202ENST00000334654 J3KT08 172 aa9.64□□□□□ -0.87
CHGA-202ENST00000334654 IGKV3D-7A0A0C4DH55 119 aa9.63□□□□□ -0.87
CHGA-202ENST00000334654 C9orf92A6NGG3 77 aa9.59□□□□□ -0.87
CHGA-202ENST00000334654 HIST1H4AP62805 103 aaKnown RBP9.57□□□□□ -0.88
CHGA-202ENST00000334654 DSCR10P59022 87 aa9.55□□□□□ -0.88
CHGA-202ENST00000334654 XP32Q5T750 250 aa9.54□□□□□ -0.88
CHGA-202ENST00000334654 A0A1B0GVX0 72 aa9.53□□□□□ -0.88
CHGA-202ENST00000334654 NOTCH2NLQ7Z3S9 236 aa9.53□□□□□ -0.88
CHGA-202ENST00000334654 A8MWP4 228 aa9.53□□□□□ -0.88
CHGA-202ENST00000334654 NDUFB1O75438 58 aa9.52□□□□□ -0.89
CHGA-202ENST00000334654 IGHV6-1A0A0B4J1U7 121 aa9.51□□□□□ -0.89
CHGA-202ENST00000334654 UBR4Q5T4S7 5183 aa9.49□□□□□ -0.89
CHGA-202ENST00000334654 LINC00313P59037 77 aa9.48□□□□□ -0.89
CHGA-202ENST00000334654 PRR15Q8IV56 129 aa9.48□□□□□ -0.89
CHGA-202ENST00000334654 FAM236AA0A1B0GUQ0 79 aa9.47□□□□□ -0.89
CHGA-202ENST00000334654 FAM236BA0A1B0GV22 79 aa9.47□□□□□ -0.89
CHGA-202ENST00000334654 KRTAP16-1A8MUX0 517 aa9.47□□□□□ -0.89
CHGA-202ENST00000334654 K7EQZ3 153 aa9.47□□□□□ -0.89
CHGA-202ENST00000334654 A0A087WVE0 104 aa9.45□□□□□ -0.9
CHGA-202ENST00000334654 C8orf87E5RJ46 101 aa9.45□□□□□ -0.9
CHGA-202ENST00000334654 ATOX1O00244 68 aa9.45□□□□□ -0.9
CHGA-202ENST00000334654 SMIM20Q8N5G0 67 aa9.45□□□□□ -0.9
CHGA-202ENST00000334654 Q8N9L7 120 aa9.45□□□□□ -0.9
CHGA-202ENST00000334654 C8orf17Q9NRJ1 99 aa9.43□□□□□ -0.9
CHGA-202ENST00000334654 C20orf166-AS1Q96NR2 134 aa9.4□□□□□ -0.9
CHGA-202ENST00000334654 MMP24-AS1A0A0U1RRL7 71 aa9.4□□□□□ -0.91
CHGA-202ENST00000334654 RPL37P61927 97 aaKnown RBP9.4□□□□□ -0.91
CHGA-202ENST00000334654 A8MUU9 505 aa9.39□□□□□ -0.91
CHGA-202ENST00000334654 HCG22E2RYF7 251 aa9.39□□□□□ -0.91
CHGA-202ENST00000334654 Q75L30 129 aa9.38□□□□□ -0.91
CHGA-202ENST00000334654 ANAPC13Q9BS18 74 aa9.38□□□□□ -0.91
CHGA-202ENST00000334654 MUC17Q685J3 4493 aa9.37□□□□□ -0.91
CHGA-202ENST00000334654 PCP4P48539 62 aa9.36□□□□□ -0.91
CHGA-202ENST00000334654 RNF213Q63HN8 5207 aa9.34□□□□□ -0.91
CHGA-202ENST00000334654 Q8N9P0 234 aaPredicted RBP9.33□□□□□ -0.92
CHGA-202ENST00000334654 SEC61BP60468 96 aaKnown RBP9.32□□□□□ -0.92
CHGA-202ENST00000334654 CASC2Q6XLA1 102 aa9.32□□□□□ -0.92
CHGA-202ENST00000334654 SERP2Q8N6R1 65 aa9.32□□□□□ -0.92
CHGA-202ENST00000334654 TRAV7A0A075B6U4 112 aa9.31□□□□□ -0.92
CHGA-202ENST00000334654 hDV103S1A0JD37 113 aa9.31□□□□□ -0.92
CHGA-202ENST00000334654 PCOTHQ58A44 107 aa9.31□□□□□ -0.92
CHGA-202ENST00000334654 TMEM254Q8TBM7 123 aa9.31□□□□□ -0.92
CHGA-202ENST00000334654 MRPL34Q9BQ48 92 aaKnown RBP9.29□□□□□ -0.92
CHGA-202ENST00000334654 WFDC13Q8IUB5 93 aa9.28□□□□□ -0.92
CHGA-202ENST00000334654 KRTAP4-1Q9BYQ7 146 aa9.28□□□□□ -0.92
CHGA-202ENST00000334654 UQCRQO14949 82 aa9.27□□□□□ -0.93
CHGA-202ENST00000334654 COX7CP15954 63 aa9.27□□□□□ -0.93
CHGA-202ENST00000334654 OCR1Q9BZK8 76 aa9.27□□□□□ -0.93
CHGA-202ENST00000334654 TP53AIP1Q9HCN2 124 aa9.25□□□□□ -0.93
CHGA-202ENST00000334654 ATP11AUNQ6ZP68 121 aa9.24□□□□□ -0.93
CHGA-202ENST00000334654 MUC2Q02817 5179 aa9.24□□□□□ -0.93
CHGA-202ENST00000334654 C5orf47Q569G3 176 aa9.2□□□□□ -0.94
CHGA-202ENST00000334654 ZCCHC13Q8WW36 166 aaKnown RBP9.18□□□□□ -0.94
CHGA-202ENST00000334654 NDUFS5O43920 106 aa9.15□□□□□ -0.94
CHGA-202ENST00000334654 H3BPC8 53 aa9.14□□□□□ -0.95
CHGA-202ENST00000334654 Q5W150 140 aa9.12□□□□□ -0.95
CHGA-202ENST00000334654 MP68P56378 58 aa9.1□□□□□ -0.95
CHGA-202ENST00000334654 KLKP1Q107X0 134 aa9.1□□□□□ -0.95
CHGA-202ENST00000334654 CCDC179H3BU77 68 aa9.08□□□□□ -0.96
CHGA-202ENST00000334654 TRAV22A0A0B4J277 110 aa9.07□□□□□ -0.96
CHGA-202ENST00000334654 NDUFC1O43677 76 aa9.07□□□□□ -0.96
CHGA-202ENST00000334654 C20orf197Q8N268 126 aa9.06□□□□□ -0.96
CHGA-202ENST00000334654 A0A0U1RQV1 116 aa9.03□□□□□ -0.96
CHGA-202ENST00000334654 H0Y9P7 68 aa9.02□□□□□ -0.97
CHGA-202ENST00000334654 SPINK7P58062 85 aa9□□□□□ -0.97
CHGA-202ENST00000334654 KRTAP19-2Q3LHN2 52 aa9□□□□□ -0.97
CHGA-202ENST00000334654 HRES1P13985 223 aa8.96□□□□□ -0.97
CHGA-202ENST00000334654 LINC00208Q96KT6 92 aa8.96□□□□□ -0.97
CHGA-202ENST00000334654 C1orf64Q8NEQ6 169 aa8.96□□□□□ -0.98
CHGA-202ENST00000334654 LOC101927531A0A1B0GV80 90 aa8.95□□□□□ -0.98
CHGA-202ENST00000334654 MPLKIPQ8TAP9 179 aa8.94□□□□□ -0.98
CHGA-202ENST00000334654 SNURFQ9Y675 71 aa8.94□□□□□ -0.98
CHGA-202ENST00000334654 FAT4Q6V0I7 4981 aa8.93□□□□□ -0.98
CHGA-202ENST00000334654 LCE2CQ5TA81 110 aa8.93□□□□□ -0.98
CHGA-202ENST00000334654 IGKV2D-30A0A075B6S6 120 aa8.91□□□□□ -0.98
CHGA-202ENST00000334654 H7BZZ5 65 aa8.91□□□□□ -0.98
CHGA-202ENST00000334654 IGKV2-30P06310 120 aa8.91□□□□□ -0.98
CHGA-202ENST00000334654 TMEM258P61165 79 aa8.9□□□□□ -0.98
CHGA-202ENST00000334654 C7orf65Q6ZTY9 151 aa8.89□□□□□ -0.99
CHGA-202ENST00000334654 CYSTM1Q9H1C7 97 aa8.85□□□□□ -0.99
CHGA-202ENST00000334654 ATP5EP56381 51 aaPredicted RBP8.84□□□□□ -0.99
CHGA-202ENST00000334654 CYP4F30PQ9H0H9 118 aa8.84□□□□□ -0.99
CHGA-202ENST00000334654 SPANXA2-OT1Q8N9U9 137 aa8.83□□□□□ -1
CHGA-202ENST00000334654 RBM12B-AS1Q9P1G2 102 aa8.79□□□□□ -1
CHGA-202ENST00000334654 COX6B2Q6YFQ2 88 aa8.77□□□□□ -1
CHGA-202ENST00000334654 FLGP20930 4061 aaPredicted RBP8.77□□□□□ -1.01
CHGA-202ENST00000334654 LCE2AQ5TA79 106 aaPredicted RBP8.77□□□□□ -1.01
CHGA-202ENST00000334654 FAM236DA0A1B0GTK5 79 aa8.75□□□□□ -1.01
CHGA-202ENST00000334654 FAM236CP0DP71 79 aa8.75□□□□□ -1.01
CHGA-202ENST00000334654 MT1HP80294 61 aa8.74□□□□□ -1.01
CHGA-202ENST00000334654 C4orf26Q17RF5 130 aa8.74□□□□□ -1.01
CHGA-202ENST00000334654 KRTAP3-1Q9BYR8 98 aa8.69□□□□□ -1.02
CHGA-202ENST00000334654 RPS28P62857 69 aaKnown RBP8.68□□□□□ -1.02
CHGA-202ENST00000334654 SERP1Q9Y6X1 66 aa8.62□□□□□ -1.03
CHGA-202ENST00000334654 H1FX-AS1Q4G0G2 97 aa8.61□□□□□ -1.03
CHGA-202ENST00000334654 A8MUN3 132 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms