RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 DEFB116Q30KQ4 102 aa10.29□□□□□ -0.76
SYNE4-201ENST00000324444 DSCR10P59022 87 aa10.28□□□□□ -0.76
SYNE4-201ENST00000324444 C1orf195Q5TG92 126 aa10.28□□□□□ -0.76
SYNE4-201ENST00000324444 PRR15Q8IV56 129 aa10.26□□□□□ -0.77
SYNE4-201ENST00000324444 K7EQZ3 153 aa10.23□□□□□ -0.77
SYNE4-201ENST00000324444 A0A1B0GVX0 72 aa10.21□□□□□ -0.78
SYNE4-201ENST00000324444 SCGB1A1P11684 91 aa10.2□□□□□ -0.78
SYNE4-201ENST00000324444 C8orf87E5RJ46 101 aa10.19□□□□□ -0.78
SYNE4-201ENST00000324444 Q8N9L7 120 aa10.19□□□□□ -0.78
SYNE4-201ENST00000324444 FP248Q71RG6 208 aaPredicted RBP10.17□□□□□ -0.78
SYNE4-201ENST00000324444 IGHV6-1A0A0B4J1U7 121 aa10.15□□□□□ -0.78
SYNE4-201ENST00000324444 HCG22E2RYF7 251 aa10.15□□□□□ -0.78
SYNE4-201ENST00000324444 A0A087WVE0 104 aa10.14□□□□□ -0.79
SYNE4-201ENST00000324444 C8orf17Q9NRJ1 99 aa10.13□□□□□ -0.79
SYNE4-201ENST00000324444 FAM236AA0A1B0GUQ0 79 aa10.12□□□□□ -0.79
SYNE4-201ENST00000324444 FAM236BA0A1B0GV22 79 aa10.12□□□□□ -0.79
SYNE4-201ENST00000324444 LINC00313P59037 77 aa10.11□□□□□ -0.79
SYNE4-201ENST00000324444 CASC2Q6XLA1 102 aa10.11□□□□□ -0.79
SYNE4-201ENST00000324444 hDV103S1A0JD37 113 aa10.09□□□□□ -0.79
SYNE4-201ENST00000324444 MMP24-AS1A0A0U1RRL7 71 aa10.08□□□□□ -0.8
SYNE4-201ENST00000324444 ATOX1O00244 68 aa10.08□□□□□ -0.8
SYNE4-201ENST00000324444 SMIM20Q8N5G0 67 aa10.08□□□□□ -0.8
SYNE4-201ENST00000324444 RNF213Q63HN8 5207 aa10.08□□□□□ -0.8
SYNE4-201ENST00000324444 LPAP08519 4548 aa10.07□□□□□ -0.8
SYNE4-201ENST00000324444 TMEM254Q8TBM7 123 aa10.06□□□□□ -0.8
SYNE4-201ENST00000324444 RETNLBQ9BQ08 111 aa10.06□□□□□ -0.8
SYNE4-201ENST00000324444 WFDC13Q8IUB5 93 aa10.05□□□□□ -0.8
SYNE4-201ENST00000324444 MRPL34Q9BQ48 92 aaKnown RBP10.02□□□□□ -0.8
SYNE4-201ENST00000324444 IGLV7-46A0A075B6I9 117 aa10.01□□□□□ -0.81
SYNE4-201ENST00000324444 PRR4Q16378 134 aa10.01□□□□□ -0.81
SYNE4-201ENST00000324444 TP53AIP1Q9HCN2 124 aa9.99□□□□□ -0.81
SYNE4-201ENST00000324444 NOTCH2NLQ7Z3S9 236 aa9.97□□□□□ -0.81
SYNE4-201ENST00000324444 TRAV7A0A075B6U4 112 aa9.94□□□□□ -0.82
SYNE4-201ENST00000324444 ANAPC13Q9BS18 74 aa9.94□□□□□ -0.82
SYNE4-201ENST00000324444 NDUFS5O43920 106 aa9.93□□□□□ -0.82
SYNE4-201ENST00000324444 Q8N9P0 234 aaPredicted RBP9.93□□□□□ -0.82
SYNE4-201ENST00000324444 UQCRQO14949 82 aa9.92□□□□□ -0.82
SYNE4-201ENST00000324444 KRTAP16-1A8MUX0 517 aa9.91□□□□□ -0.82
SYNE4-201ENST00000324444 SERP2Q8N6R1 65 aa9.91□□□□□ -0.82
SYNE4-201ENST00000324444 C9orf92A6NGG3 77 aa9.9□□□□□ -0.82
SYNE4-201ENST00000324444 OCR1Q9BZK8 76 aa9.9□□□□□ -0.82
SYNE4-201ENST00000324444 TPRXLQ17RH7 258 aa9.89□□□□□ -0.83
SYNE4-201ENST00000324444 KRTAP13-3Q3SY46 172 aa9.88□□□□□ -0.83
SYNE4-201ENST00000324444 C5orf47Q569G3 176 aa9.86□□□□□ -0.83
SYNE4-201ENST00000324444 C20orf166-AS1Q96NR2 134 aa9.86□□□□□ -0.83
SYNE4-201ENST00000324444 A8MUU9 505 aa9.84□□□□□ -0.83
SYNE4-201ENST00000324444 COX7CP15954 63 aa9.84□□□□□ -0.83
SYNE4-201ENST00000324444 MP68P56378 58 aa9.82□□□□□ -0.84
SYNE4-201ENST00000324444 Q75L30 129 aa9.82□□□□□ -0.84
SYNE4-201ENST00000324444 TRAV22A0A0B4J277 110 aa9.8□□□□□ -0.84
SYNE4-201ENST00000324444 H3BPC8 53 aa9.8□□□□□ -0.84
SYNE4-201ENST00000324444 H0Y9P7 68 aa9.75□□□□□ -0.85
SYNE4-201ENST00000324444 PCP4P48539 62 aa9.75□□□□□ -0.85
SYNE4-201ENST00000324444 XP32Q5T750 250 aa9.75□□□□□ -0.85
SYNE4-201ENST00000324444 MUC2Q02817 5179 aa9.74□□□□□ -0.85
SYNE4-201ENST00000324444 ATP11AUNQ6ZP68 121 aa9.74□□□□□ -0.85
SYNE4-201ENST00000324444 ZCCHC13Q8WW36 166 aaKnown RBP9.74□□□□□ -0.85
SYNE4-201ENST00000324444 RPL37P61927 97 aaKnown RBP9.73□□□□□ -0.85
SYNE4-201ENST00000324444 C20orf197Q8N268 126 aa9.69□□□□□ -0.86
SYNE4-201ENST00000324444 LOC101927531A0A1B0GV80 90 aa9.68□□□□□ -0.86
SYNE4-201ENST00000324444 LINC00208Q96KT6 92 aa9.67□□□□□ -0.86
SYNE4-201ENST00000324444 KLKP1Q107X0 134 aa9.66□□□□□ -0.86
SYNE4-201ENST00000324444 Q5W150 140 aa9.66□□□□□ -0.86
SYNE4-201ENST00000324444 C1orf64Q8NEQ6 169 aa9.66□□□□□ -0.86
SYNE4-201ENST00000324444 A0A0U1RQV1 116 aa9.65□□□□□ -0.86
SYNE4-201ENST00000324444 NDUFC1O43677 76 aa9.64□□□□□ -0.87
SYNE4-201ENST00000324444 CCDC179H3BU77 68 aa9.62□□□□□ -0.87
SYNE4-201ENST00000324444 SEC61BP60468 96 aaKnown RBP9.61□□□□□ -0.87
SYNE4-201ENST00000324444 MUC17Q685J3 4493 aa9.59□□□□□ -0.87
SYNE4-201ENST00000324444 IGKV2-30P06310 120 aa9.58□□□□□ -0.88
SYNE4-201ENST00000324444 C7orf65Q6ZTY9 151 aa9.58□□□□□ -0.88
SYNE4-201ENST00000324444 SNURFQ9Y675 71 aa9.58□□□□□ -0.88
SYNE4-201ENST00000324444 CYP4F30PQ9H0H9 118 aa9.55□□□□□ -0.88
SYNE4-201ENST00000324444 FAT4Q6V0I7 4981 aa9.54□□□□□ -0.88
SYNE4-201ENST00000324444 IGKV2D-30A0A075B6S6 120 aa9.53□□□□□ -0.88
SYNE4-201ENST00000324444 PCOTHQ58A44 107 aa9.51□□□□□ -0.89
SYNE4-201ENST00000324444 SPINK7P58062 85 aa9.49□□□□□ -0.89
SYNE4-201ENST00000324444 H7BZZ5 65 aa9.45□□□□□ -0.9
SYNE4-201ENST00000324444 LCE2AQ5TA79 106 aaPredicted RBP9.43□□□□□ -0.9
SYNE4-201ENST00000324444 SPANXA2-OT1Q8N9U9 137 aa9.43□□□□□ -0.9
SYNE4-201ENST00000324444 TMEM258P61165 79 aa9.42□□□□□ -0.9
SYNE4-201ENST00000324444 ATP5EP56381 51 aaPredicted RBP9.4□□□□□ -0.9
SYNE4-201ENST00000324444 CYSTM1Q9H1C7 97 aa9.39□□□□□ -0.91
SYNE4-201ENST00000324444 HRES1P13985 223 aa9.37□□□□□ -0.91
SYNE4-201ENST00000324444 KRTAP4-1Q9BYQ7 146 aa9.36□□□□□ -0.91
SYNE4-201ENST00000324444 FAM236DA0A1B0GTK5 79 aa9.32□□□□□ -0.92
SYNE4-201ENST00000324444 FAM236CP0DP71 79 aa9.32□□□□□ -0.92
SYNE4-201ENST00000324444 A8MUN3 132 aa9.3□□□□□ -0.92
SYNE4-201ENST00000324444 RBM12B-AS1Q9P1G2 102 aa9.28□□□□□ -0.92
SYNE4-201ENST00000324444 C4orf26Q17RF5 130 aa9.26□□□□□ -0.93
SYNE4-201ENST00000324444 KRTAP9-2Q9BYQ4 174 aa9.26□□□□□ -0.93
SYNE4-201ENST00000324444 COX6B2Q6YFQ2 88 aa9.25□□□□□ -0.93
SYNE4-201ENST00000324444 ACYP2P14621 99 aa9.24□□□□□ -0.93
SYNE4-201ENST00000324444 DMAC1Q96GE9 116 aa9.24□□□□□ -0.93
SYNE4-201ENST00000324444 MPLKIPQ8TAP9 179 aa9.19□□□□□ -0.94
SYNE4-201ENST00000324444 SERP1Q9Y6X1 66 aa9.12□□□□□ -0.95
SYNE4-201ENST00000324444 LCE2CQ5TA81 110 aa9.11□□□□□ -0.95
SYNE4-201ENST00000324444 H1FX-AS1Q4G0G2 97 aa9.1□□□□□ -0.95
SYNE4-201ENST00000324444 KRTAP19-2Q3LHN2 52 aa9.09□□□□□ -0.95
SYNE4-201ENST00000324444 CHKB-CPT1BH3BT56 60 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms