RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 A0A087X002 238 aa9.45□□□□□ -0.9
SHISA2-201ENST00000319420 KTN1-AS1Q86SY8 53 aa9.45□□□□□ -0.9
SHISA2-201ENST00000319420 C1orf64Q8NEQ6 169 aa9.43□□□□□ -0.9
SHISA2-201ENST00000319420 A8MWP4 228 aa9.42□□□□□ -0.9
SHISA2-201ENST00000319420 KRTAP29-1A8MX34 341 aaPredicted RBP9.42□□□□□ -0.9
SHISA2-201ENST00000319420 FAT1Q14517 4588 aa9.42□□□□□ -0.9
SHISA2-201ENST00000319420 IGHV6-1A0A0B4J1U7 121 aa9.42□□□□□ -0.9
SHISA2-201ENST00000319420 LCE6AA0A183 80 aa9.42□□□□□ -0.9
SHISA2-201ENST00000319420 A8MUN3 132 aa9.42□□□□□ -0.9
SHISA2-201ENST00000319420 Q96NJ1 140 aa9.42□□□□□ -0.9
SHISA2-201ENST00000319420 CASC2Q6XLA1 102 aa9.42□□□□□ -0.9
SHISA2-201ENST00000319420 DYNC1H1Q14204 4646 aaKnown RBP9.4□□□□□ -0.9
SHISA2-201ENST00000319420 NDUFB1O75438 58 aa9.38□□□□□ -0.91
SHISA2-201ENST00000319420 CDK2AP2O75956 126 aa9.37□□□□□ -0.91
SHISA2-201ENST00000319420 SPTSSBQ8NFR3 76 aa9.36□□□□□ -0.91
SHISA2-201ENST00000319420 PRR4Q16378 134 aa9.35□□□□□ -0.91
SHISA2-201ENST00000319420 KRTAP13-2Q52LG2 175 aa9.35□□□□□ -0.91
SHISA2-201ENST00000319420 ZCCHC13Q8WW36 166 aaKnown RBP9.35□□□□□ -0.91
SHISA2-201ENST00000319420 NDUFS5O43920 106 aa9.34□□□□□ -0.91
SHISA2-201ENST00000319420 NOTCH2NLQ7Z3S9 236 aa9.34□□□□□ -0.91
SHISA2-201ENST00000319420 RYR2Q92736 4967 aa9.34□□□□□ -0.91
SHISA2-201ENST00000319420 MMP24-AS1A0A0U1RRL7 71 aa9.34□□□□□ -0.91
SHISA2-201ENST00000319420 PLA2G1BP04054 148 aaKnown RBP9.33□□□□□ -0.92
SHISA2-201ENST00000319420 Q5VV11 94 aa9.33□□□□□ -0.92
SHISA2-201ENST00000319420 H3BS24 57 aa9.32□□□□□ -0.92
SHISA2-201ENST00000319420 LINC00208Q96KT6 92 aa9.3□□□□□ -0.92
SHISA2-201ENST00000319420 C8orf87E5RJ46 101 aa9.28□□□□□ -0.92
SHISA2-201ENST00000319420 KRTAP1-4P0C5Y4 121 aa9.28□□□□□ -0.92
SHISA2-201ENST00000319420 C8orf17Q9NRJ1 99 aa9.27□□□□□ -0.92
SHISA2-201ENST00000319420 SSBP3-AS1Q7Z2R9 100 aa9.27□□□□□ -0.93
SHISA2-201ENST00000319420 A0A1B0GVX0 72 aa9.26□□□□□ -0.93
SHISA2-201ENST00000319420 CHKB-CPT1BH3BT56 60 aa9.26□□□□□ -0.93
SHISA2-201ENST00000319420 H0Y9P7 68 aa9.26□□□□□ -0.93
SHISA2-201ENST00000319420 MP68P56378 58 aa9.25□□□□□ -0.93
SHISA2-201ENST00000319420 PRR26Q8N8Z3 221 aa9.25□□□□□ -0.93
SHISA2-201ENST00000319420 A6NN06 94 aa9.24□□□□□ -0.93
SHISA2-201ENST00000319420 TYMSOSQ8TAI1 123 aa9.23□□□□□ -0.93
SHISA2-201ENST00000319420 LCA10Q71F78 164 aa9.23□□□□□ -0.93
SHISA2-201ENST00000319420 APOBP04114 4563 aaKnown RBP9.22□□□□□ -0.93
SHISA2-201ENST00000319420 A0A1B0GVY2 172 aa9.22□□□□□ -0.93
SHISA2-201ENST00000319420 RYR3Q15413 4870 aa9.22□□□□□ -0.93
SHISA2-201ENST00000319420 ASB16-AS1Q495Z4 193 aa9.22□□□□□ -0.93
SHISA2-201ENST00000319420 RETNLBQ9BQ08 111 aa9.19□□□□□ -0.94
SHISA2-201ENST00000319420 PRR15LQ9BU68 103 aa9.18□□□□□ -0.94
SHISA2-201ENST00000319420 ATP11AUNQ6ZP68 121 aa9.17□□□□□ -0.94
SHISA2-201ENST00000319420 PCOTHQ58A44 107 aa9.16□□□□□ -0.94
SHISA2-201ENST00000319420 CYP4F30PQ9H0H9 118 aa9.16□□□□□ -0.94
SHISA2-201ENST00000319420 FLG2Q5D862 2391 aaPredicted RBP9.16□□□□□ -0.94
SHISA2-201ENST00000319420 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.94
SHISA2-201ENST00000319420 C7orf65Q6ZTY9 151 aa9.14□□□□□ -0.95
SHISA2-201ENST00000319420 Q8N9P0 234 aaPredicted RBP9.14□□□□□ -0.95
SHISA2-201ENST00000319420 A6NED7 52 aa9.12□□□□□ -0.95
SHISA2-201ENST00000319420 H3BPC8 53 aa9.1□□□□□ -0.95
SHISA2-201ENST00000319420 LINC00313P59037 77 aa9.09□□□□□ -0.95
SHISA2-201ENST00000319420 TP53AIP1Q9HCN2 124 aa9.08□□□□□ -0.96
SHISA2-201ENST00000319420 LINC00304Q8N9R0 145 aa9.07□□□□□ -0.96
SHISA2-201ENST00000319420 Q5W150 140 aa9.07□□□□□ -0.96
SHISA2-201ENST00000319420 LRP1Q07954 4544 aaKnown RBP9.07□□□□□ -0.96
SHISA2-201ENST00000319420 LIMD2Q9BT23 127 aa9.06□□□□□ -0.96
SHISA2-201ENST00000319420 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
SHISA2-201ENST00000319420 Q75L30 129 aa9.04□□□□□ -0.96
SHISA2-201ENST00000319420 PRAC1Q96KF2 57 aa9.03□□□□□ -0.96
SHISA2-201ENST00000319420 SPINK1P00995 79 aa9.02□□□□□ -0.97
SHISA2-201ENST00000319420 KRTAP10-4P60372 401 aaPredicted RBP9.02□□□□□ -0.97
SHISA2-201ENST00000319420 CDC42SE1Q9NRR8 79 aa9.02□□□□□ -0.97
SHISA2-201ENST00000319420 KIAA1109Q2LD37 5005 aa9.01□□□□□ -0.97
SHISA2-201ENST00000319420 SPANXA2-OT1Q8N9U9 137 aa9.01□□□□□ -0.97
SHISA2-201ENST00000319420 C9orf92A6NGG3 77 aa8.98□□□□□ -0.97
SHISA2-201ENST00000319420 HSPG2P98160 4391 aa8.97□□□□□ -0.97
SHISA2-201ENST00000319420 KRTAP13-3Q3SY46 172 aa8.97□□□□□ -0.97
SHISA2-201ENST00000319420 IGLV7-46A0A075B6I9 117 aa8.96□□□□□ -0.97
SHISA2-201ENST00000319420 FAM229AH3BQW9 127 aa8.95□□□□□ -0.98
SHISA2-201ENST00000319420 LOC101927531A0A1B0GV80 90 aa8.95□□□□□ -0.98
SHISA2-201ENST00000319420 ADM2Q7Z4H4 148 aa8.94□□□□□ -0.98
SHISA2-201ENST00000319420 Q5VSD8 79 aa8.94□□□□□ -0.98
SHISA2-201ENST00000319420 MYCBP2O75592 4640 aa8.93□□□□□ -0.98
SHISA2-201ENST00000319420 EPPK1P58107 5090 aaKnown RBP8.93□□□□□ -0.98
SHISA2-201ENST00000319420 PKHD1L1Q86WI1 4243 aa8.92□□□□□ -0.98
SHISA2-201ENST00000319420 KRTAP16-1A8MUX0 517 aa8.91□□□□□ -0.98
SHISA2-201ENST00000319420 LINC01554Q52M75 96 aa8.91□□□□□ -0.98
SHISA2-201ENST00000319420 IGKV2D-30A0A075B6S6 120 aa8.9□□□□□ -0.99
SHISA2-201ENST00000319420 IGKV2-30P06310 120 aa8.9□□□□□ -0.99
SHISA2-201ENST00000319420 SPINK7P58062 85 aa8.89□□□□□ -0.99
SHISA2-201ENST00000319420 COA5Q86WW8 74 aa8.89□□□□□ -0.99
SHISA2-201ENST00000319420 KRTAP17-1Q9BYP8 105 aa8.88□□□□□ -0.99
SHISA2-201ENST00000319420 SPAG11AQ6PDA7 123 aa8.87□□□□□ -0.99
SHISA2-201ENST00000319420 RYR1P21817 5038 aa8.87□□□□□ -0.99
SHISA2-201ENST00000319420 Q8N1X5 172 aa8.84□□□□□ -0.99
SHISA2-201ENST00000319420 HRES1P13985 223 aa8.83□□□□□ -1
SHISA2-201ENST00000319420 LINC01558Q9Y6Z2 57 aa8.77□□□□□ -1.01
SHISA2-201ENST00000319420 TNXBP22105 4242 aa8.76□□□□□ -1.01
SHISA2-201ENST00000319420 RPS29P62273 56 aaKnown RBP8.74□□□□□ -1.01
SHISA2-201ENST00000319420 FAT3Q8TDW7 4589 aa8.71□□□□□ -1.01
SHISA2-201ENST00000319420 KRTAP10-8P60410 259 aa8.66□□□□□ -1.02
SHISA2-201ENST00000319420 DMAC1Q96GE9 116 aa8.65□□□□□ -1.02
SHISA2-201ENST00000319420 ACYP2P14621 99 aa8.65□□□□□ -1.03
SHISA2-201ENST00000319420 KRTAP4-5Q9BYR2 181 aa8.6□□□□□ -1.03
SHISA2-201ENST00000319420 CSAG1Q6PB30 78 aa8.59□□□□□ -1.03
SHISA2-201ENST00000319420 A8MUU9 505 aa8.57□□□□□ -1.04
SHISA2-201ENST00000319420 C20orf166-AS1Q96NR2 134 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms