RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 Q5VSD8 79 aa3.98□□□□□ -1.77
LYSMD3-201ENST00000315948 SSBP3-AS1Q7Z2R9 100 aa3.98□□□□□ -1.77
LYSMD3-201ENST00000315948 TMEM254Q8TBM7 123 aa3.98□□□□□ -1.77
LYSMD3-201ENST00000315948 KRTAP4-5Q9BYR2 181 aa3.98□□□□□ -1.77
LYSMD3-201ENST00000315948 hDV103S1A0JD37 113 aa3.98□□□□□ -1.77
LYSMD3-201ENST00000315948 A0A1B0GVX0 72 aa3.97□□□□□ -1.77
LYSMD3-201ENST00000315948 PRR4Q16378 134 aa3.97□□□□□ -1.77
LYSMD3-201ENST00000315948 C8orf17Q9NRJ1 99 aa3.97□□□□□ -1.77
LYSMD3-201ENST00000315948 NDUFS5O43920 106 aa3.97□□□□□ -1.77
LYSMD3-201ENST00000315948 H7BZZ5 65 aa3.97□□□□□ -1.77
LYSMD3-201ENST00000315948 FAM229BQ4G0N7 80 aa3.96□□□□□ -1.78
LYSMD3-201ENST00000315948 LPAP08519 4548 aa3.96□□□□□ -1.78
LYSMD3-201ENST00000315948 NDUFB1O75438 58 aa3.95□□□□□ -1.78
LYSMD3-201ENST00000315948 CDK2AP2O75956 126 aa3.95□□□□□ -1.78
LYSMD3-201ENST00000315948 Q5W150 140 aa3.95□□□□□ -1.78
LYSMD3-201ENST00000315948 LINC00304Q8N9R0 145 aa3.95□□□□□ -1.78
LYSMD3-201ENST00000315948 A0A0U1RQV1 116 aa3.94□□□□□ -1.78
LYSMD3-201ENST00000315948 Q8N1X5 172 aa3.94□□□□□ -1.78
LYSMD3-201ENST00000315948 OXTP01178 125 aa3.94□□□□□ -1.78
LYSMD3-201ENST00000315948 HERC2O95714 4834 aa3.94□□□□□ -1.78
LYSMD3-201ENST00000315948 LINC00208Q96KT6 92 aa3.94□□□□□ -1.78
LYSMD3-201ENST00000315948 KLKP1Q107X0 134 aa3.93□□□□□ -1.78
LYSMD3-201ENST00000315948 C9orf92A6NGG3 77 aa3.93□□□□□ -1.78
LYSMD3-201ENST00000315948 C4orf48Q5BLP8 95 aa3.93□□□□□ -1.78
LYSMD3-201ENST00000315948 J3KT08 172 aa3.93□□□□□ -1.78
LYSMD3-201ENST00000315948 CD164Q04900 197 aa3.92□□□□□ -1.78
LYSMD3-201ENST00000315948 ASB16-AS1Q495Z4 193 aa3.92□□□□□ -1.78
LYSMD3-201ENST00000315948 SMIM20Q8N5G0 67 aa3.92□□□□□ -1.78
LYSMD3-201ENST00000315948 FAM229AH3BQW9 127 aa3.92□□□□□ -1.78
LYSMD3-201ENST00000315948 H0Y9P7 68 aa3.91□□□□□ -1.78
LYSMD3-201ENST00000315948 PCLOQ9Y6V0 5065 aa3.91□□□□□ -1.78
LYSMD3-201ENST00000315948 LRP2P98164 4655 aa3.91□□□□□ -1.78
LYSMD3-201ENST00000315948 PCOTHQ58A44 107 aa3.9□□□□□ -1.78
LYSMD3-201ENST00000315948 MRPL34Q9BQ48 92 aaKnown RBP3.9□□□□□ -1.78
LYSMD3-201ENST00000315948 SPINK1P00995 79 aa3.9□□□□□ -1.79
LYSMD3-201ENST00000315948 LINC00313P59037 77 aa3.9□□□□□ -1.79
LYSMD3-201ENST00000315948 ZCCHC13Q8WW36 166 aaKnown RBP3.9□□□□□ -1.79
LYSMD3-201ENST00000315948 KRTAP16-1A8MUX0 517 aa3.89□□□□□ -1.79
LYSMD3-201ENST00000315948 C1orf64Q8NEQ6 169 aa3.88□□□□□ -1.79
LYSMD3-201ENST00000315948 HERC1Q15751 4861 aa3.88□□□□□ -1.79
LYSMD3-201ENST00000315948 TRAV22A0A0B4J277 110 aa3.88□□□□□ -1.79
LYSMD3-201ENST00000315948 FAM236DA0A1B0GTK5 79 aa3.87□□□□□ -1.79
LYSMD3-201ENST00000315948 FAM236CP0DP71 79 aa3.87□□□□□ -1.79
LYSMD3-201ENST00000315948 TMEM258P61165 79 aa3.87□□□□□ -1.79
LYSMD3-201ENST00000315948 C5orf47Q569G3 176 aa3.87□□□□□ -1.79
LYSMD3-201ENST00000315948 LIMD2Q9BT23 127 aa3.87□□□□□ -1.79
LYSMD3-201ENST00000315948 Q5XG85 94 aa3.87□□□□□ -1.79
LYSMD3-201ENST00000315948 BIRC6Q9NR09 4857 aa3.86□□□□□ -1.79
LYSMD3-201ENST00000315948 MUC2Q02817 5179 aa3.86□□□□□ -1.79
LYSMD3-201ENST00000315948 Q8N9P0 234 aaPredicted RBP3.86□□□□□ -1.79
LYSMD3-201ENST00000315948 MP68P56378 58 aa3.86□□□□□ -1.79
LYSMD3-201ENST00000315948 MT1HL1P0DM35 61 aa3.85□□□□□ -1.79
LYSMD3-201ENST00000315948 KRTAP10-8P60410 259 aa3.85□□□□□ -1.79
LYSMD3-201ENST00000315948 KRTAP13-3Q3SY46 172 aa3.85□□□□□ -1.79
LYSMD3-201ENST00000315948 IGKV2D-30A0A075B6S6 120 aa3.82□□□□□ -1.8
LYSMD3-201ENST00000315948 IGKV2-30P06310 120 aa3.82□□□□□ -1.8
LYSMD3-201ENST00000315948 SPAG11AQ6PDA7 123 aa3.81□□□□□ -1.8
LYSMD3-201ENST00000315948 C8orf87E5RJ46 101 aa3.8□□□□□ -1.8
LYSMD3-201ENST00000315948 TP53AIP1Q9HCN2 124 aa3.8□□□□□ -1.8
LYSMD3-201ENST00000315948 NDUFC1O43677 76 aa3.79□□□□□ -1.8
LYSMD3-201ENST00000315948 CYP4F30PQ9H0H9 118 aa3.79□□□□□ -1.8
LYSMD3-201ENST00000315948 RPS29P62273 56 aaKnown RBP3.77□□□□□ -1.81
LYSMD3-201ENST00000315948 FP248Q71RG6 208 aaPredicted RBP3.77□□□□□ -1.81
LYSMD3-201ENST00000315948 MPLKIPQ8TAP9 179 aa3.77□□□□□ -1.81
LYSMD3-201ENST00000315948 HRES1P13985 223 aa3.76□□□□□ -1.81
LYSMD3-201ENST00000315948 C4orf26Q17RF5 130 aa3.76□□□□□ -1.81
LYSMD3-201ENST00000315948 SERP1Q9Y6X1 66 aa3.75□□□□□ -1.81
LYSMD3-201ENST00000315948 IGLV7-46A0A075B6I9 117 aa3.75□□□□□ -1.81
LYSMD3-201ENST00000315948 H3BPC8 53 aa3.73□□□□□ -1.81
LYSMD3-201ENST00000315948 RPS28P62857 69 aaKnown RBP3.73□□□□□ -1.81
LYSMD3-201ENST00000315948 LOC101927531A0A1B0GV80 90 aa3.73□□□□□ -1.81
LYSMD3-201ENST00000315948 C20orf166-AS1Q96NR2 134 aa3.73□□□□□ -1.81
LYSMD3-201ENST00000315948 A8MUU9 505 aa3.72□□□□□ -1.81
LYSMD3-201ENST00000315948 RNF213Q63HN8 5207 aa3.72□□□□□ -1.81
LYSMD3-201ENST00000315948 XP32Q5T750 250 aa3.72□□□□□ -1.81
LYSMD3-201ENST00000315948 COA5Q86WW8 74 aa3.71□□□□□ -1.82
LYSMD3-201ENST00000315948 SPANXA2-OT1Q8N9U9 137 aa3.7□□□□□ -1.82
LYSMD3-201ENST00000315948 SPINK7P58062 85 aa3.69□□□□□ -1.82
LYSMD3-201ENST00000315948 PSPHP1O15172 72 aa3.69□□□□□ -1.82
LYSMD3-201ENST00000315948 ATP5EP56381 51 aaPredicted RBP3.69□□□□□ -1.82
LYSMD3-201ENST00000315948 UBR4Q5T4S7 5183 aa3.69□□□□□ -1.82
LYSMD3-201ENST00000315948 KRTAP3-1Q9BYR8 98 aa3.68□□□□□ -1.82
LYSMD3-201ENST00000315948 HMCN2Q8NDA2 5059 aa3.68□□□□□ -1.82
LYSMD3-201ENST00000315948 J3QL48 77 aa3.66□□□□□ -1.82
LYSMD3-201ENST00000315948 C7orf65Q6ZTY9 151 aa3.66□□□□□ -1.82
LYSMD3-201ENST00000315948 Q75L30 129 aa3.66□□□□□ -1.82
LYSMD3-201ENST00000315948 FAT4Q6V0I7 4981 aa3.66□□□□□ -1.82
LYSMD3-201ENST00000315948 SMIM26A0A096LP01 95 aa3.66□□□□□ -1.82
LYSMD3-201ENST00000315948 A8MU10 97 aa3.64□□□□□ -1.83
LYSMD3-201ENST00000315948 RPL37P61927 97 aaKnown RBP3.64□□□□□ -1.83
LYSMD3-201ENST00000315948 DMAC1Q96GE9 116 aa3.64□□□□□ -1.83
LYSMD3-201ENST00000315948 A8MUN3 132 aa3.64□□□□□ -1.83
LYSMD3-201ENST00000315948 ATP11AUNQ6ZP68 121 aa3.64□□□□□ -1.83
LYSMD3-201ENST00000315948 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
LYSMD3-201ENST00000315948 ACYP2P14621 99 aa3.6□□□□□ -1.83
LYSMD3-201ENST00000315948 KRTAP4-1Q9BYQ7 146 aa3.6□□□□□ -1.83
LYSMD3-201ENST00000315948 CHKB-CPT1BH3BT56 60 aa3.6□□□□□ -1.83
LYSMD3-201ENST00000315948 PRR15LQ9BU68 103 aa3.6□□□□□ -1.83
LYSMD3-201ENST00000315948 TPRXLQ17RH7 258 aa3.59□□□□□ -1.84
LYSMD3-201ENST00000315948 Q1T7F1 81 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms