RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 ASB16-AS1Q495Z4 193 aa12.62□□□□□ -0.39
CCDC85B-201ENST00000312579 IGKV4-1P06312 121 aa12.62□□□□□ -0.39
CCDC85B-201ENST00000312579 PRR4Q16378 134 aa12.62□□□□□ -0.39
CCDC85B-201ENST00000312579 K7EQZ3 153 aa12.59□□□□□ -0.39
CCDC85B-201ENST00000312579 FAM236AA0A1B0GUQ0 79 aa12.57□□□□□ -0.4
CCDC85B-201ENST00000312579 FAM236BA0A1B0GV22 79 aa12.57□□□□□ -0.4
CCDC85B-201ENST00000312579 A8MWP4 228 aa12.57□□□□□ -0.4
CCDC85B-201ENST00000312579 NDUFB1O75438 58 aa12.54□□□□□ -0.4
CCDC85B-201ENST00000312579 IGLV7-46A0A075B6I9 117 aa12.52□□□□□ -0.4
CCDC85B-201ENST00000312579 PRR15Q8IV56 129 aa12.52□□□□□ -0.41
CCDC85B-201ENST00000312579 FP248Q71RG6 208 aaPredicted RBP12.5□□□□□ -0.41
CCDC85B-201ENST00000312579 A0A1B0GVX0 72 aa12.46□□□□□ -0.42
CCDC85B-201ENST00000312579 HMCN2Q8NDA2 5059 aa12.44□□□□□ -0.42
CCDC85B-201ENST00000312579 HCG22E2RYF7 251 aa12.44□□□□□ -0.42
CCDC85B-201ENST00000312579 IGHV6-1A0A0B4J1U7 121 aa12.43□□□□□ -0.42
CCDC85B-201ENST00000312579 LPAP08519 4548 aa12.42□□□□□ -0.42
CCDC85B-201ENST00000312579 ATOX1O00244 68 aa12.42□□□□□ -0.42
CCDC85B-201ENST00000312579 WFDC13Q8IUB5 93 aa12.39□□□□□ -0.43
CCDC85B-201ENST00000312579 MMP24-AS1A0A0U1RRL7 71 aa12.38□□□□□ -0.43
CCDC85B-201ENST00000312579 C8orf17Q9NRJ1 99 aa12.38□□□□□ -0.43
CCDC85B-201ENST00000312579 C9orf92A6NGG3 77 aa12.37□□□□□ -0.43
CCDC85B-201ENST00000312579 KRTAP13-3Q3SY46 172 aa12.37□□□□□ -0.43
CCDC85B-201ENST00000312579 ANAPC13Q9BS18 74 aa12.37□□□□□ -0.43
CCDC85B-201ENST00000312579 CASC2Q6XLA1 102 aa12.37□□□□□ -0.43
CCDC85B-201ENST00000312579 TPRXLQ17RH7 258 aa12.34□□□□□ -0.43
CCDC85B-201ENST00000312579 C8orf87E5RJ46 101 aa12.33□□□□□ -0.44
CCDC85B-201ENST00000312579 hDV103S1A0JD37 113 aa12.32□□□□□ -0.44
CCDC85B-201ENST00000312579 PCP4P48539 62 aa12.32□□□□□ -0.44
CCDC85B-201ENST00000312579 NOTCH2NLQ7Z3S9 236 aa12.29□□□□□ -0.44
CCDC85B-201ENST00000312579 SMIM20Q8N5G0 67 aa12.29□□□□□ -0.44
CCDC85B-201ENST00000312579 LRP2P98164 4655 aa12.27□□□□□ -0.45
CCDC85B-201ENST00000312579 LINC00313P59037 77 aa12.27□□□□□ -0.45
CCDC85B-201ENST00000312579 TMEM254Q8TBM7 123 aa12.26□□□□□ -0.45
CCDC85B-201ENST00000312579 TRAV7A0A075B6U4 112 aa12.23□□□□□ -0.45
CCDC85B-201ENST00000312579 SERP2Q8N6R1 65 aa12.23□□□□□ -0.45
CCDC85B-201ENST00000312579 MRPL34Q9BQ48 92 aaKnown RBP12.22□□□□□ -0.45
CCDC85B-201ENST00000312579 XP32Q5T750 250 aa12.21□□□□□ -0.45
CCDC85B-201ENST00000312579 OCR1Q9BZK8 76 aa12.21□□□□□ -0.45
CCDC85B-201ENST00000312579 UBR4Q5T4S7 5183 aa12.18□□□□□ -0.46
CCDC85B-201ENST00000312579 COX7CP15954 63 aa12.17□□□□□ -0.46
CCDC85B-201ENST00000312579 NDUFS5O43920 106 aa12.16□□□□□ -0.46
CCDC85B-201ENST00000312579 KRTAP16-1A8MUX0 517 aa12.13□□□□□ -0.47
CCDC85B-201ENST00000312579 UQCRQO14949 82 aa12.12□□□□□ -0.47
CCDC85B-201ENST00000312579 TP53AIP1Q9HCN2 124 aa12.1□□□□□ -0.47
CCDC85B-201ENST00000312579 CCDC179H3BU77 68 aa12.09□□□□□ -0.47
CCDC85B-201ENST00000312579 Q8N9P0 234 aaPredicted RBP12.06□□□□□ -0.48
CCDC85B-201ENST00000312579 RPL37P61927 97 aaKnown RBP12.03□□□□□ -0.48
CCDC85B-201ENST00000312579 C5orf47Q569G3 176 aa12.03□□□□□ -0.48
CCDC85B-201ENST00000312579 C20orf166-AS1Q96NR2 134 aa12.03□□□□□ -0.48
CCDC85B-201ENST00000312579 A8MUU9 505 aa12.01□□□□□ -0.49
CCDC85B-201ENST00000312579 C20orf197Q8N268 126 aa12.01□□□□□ -0.49
CCDC85B-201ENST00000312579 Q75L30 129 aa12.01□□□□□ -0.49
CCDC85B-201ENST00000312579 TRAV22A0A0B4J277 110 aa11.99□□□□□ -0.49
CCDC85B-201ENST00000312579 H0Y9P7 68 aa11.99□□□□□ -0.49
CCDC85B-201ENST00000312579 MP68P56378 58 aa11.98□□□□□ -0.49
CCDC85B-201ENST00000312579 PCOTHQ58A44 107 aa11.96□□□□□ -0.49
CCDC85B-201ENST00000312579 MUC17Q685J3 4493 aa11.95□□□□□ -0.5
CCDC85B-201ENST00000312579 SNURFQ9Y675 71 aa11.94□□□□□ -0.5
CCDC85B-201ENST00000312579 A0A0U1RQV1 116 aa11.93□□□□□ -0.5
CCDC85B-201ENST00000312579 SEC61BP60468 96 aaKnown RBP11.93□□□□□ -0.5
CCDC85B-201ENST00000312579 KLKP1Q107X0 134 aa11.91□□□□□ -0.5
CCDC85B-201ENST00000312579 H3BPC8 53 aa11.9□□□□□ -0.5
CCDC85B-201ENST00000312579 Q5W150 140 aa11.9□□□□□ -0.5
CCDC85B-201ENST00000312579 LINC00208Q96KT6 92 aa11.9□□□□□ -0.5
CCDC85B-201ENST00000312579 ATP11AUNQ6ZP68 121 aa11.89□□□□□ -0.51
CCDC85B-201ENST00000312579 RNF213Q63HN8 5207 aa11.86□□□□□ -0.51
CCDC85B-201ENST00000312579 C1orf64Q8NEQ6 169 aa11.86□□□□□ -0.51
CCDC85B-201ENST00000312579 CYSTM1Q9H1C7 97 aa11.85□□□□□ -0.51
CCDC85B-201ENST00000312579 ZCCHC13Q8WW36 166 aaKnown RBP11.84□□□□□ -0.51
CCDC85B-201ENST00000312579 KRTAP4-1Q9BYQ7 146 aa11.84□□□□□ -0.51
CCDC85B-201ENST00000312579 LOC101927531A0A1B0GV80 90 aa11.78□□□□□ -0.52
CCDC85B-201ENST00000312579 NDUFC1O43677 76 aa11.78□□□□□ -0.52
CCDC85B-201ENST00000312579 H7BZZ5 65 aa11.73□□□□□ -0.53
CCDC85B-201ENST00000312579 IGKV2-30P06310 120 aa11.7□□□□□ -0.54
CCDC85B-201ENST00000312579 MUC2Q02817 5179 aa11.7□□□□□ -0.54
CCDC85B-201ENST00000312579 IGKV2D-30A0A075B6S6 120 aa11.68□□□□□ -0.54
CCDC85B-201ENST00000312579 CYP4F30PQ9H0H9 118 aa11.68□□□□□ -0.54
CCDC85B-201ENST00000312579 TMEM258P61165 79 aa11.65□□□□□ -0.54
CCDC85B-201ENST00000312579 C7orf65Q6ZTY9 151 aa11.63□□□□□ -0.55
CCDC85B-201ENST00000312579 SPINK7P58062 85 aa11.58□□□□□ -0.56
CCDC85B-201ENST00000312579 FAM236DA0A1B0GTK5 79 aa11.57□□□□□ -0.56
CCDC85B-201ENST00000312579 FAM236CP0DP71 79 aa11.57□□□□□ -0.56
CCDC85B-201ENST00000312579 ATP5EP56381 51 aaPredicted RBP11.53□□□□□ -0.56
CCDC85B-201ENST00000312579 SPANXA2-OT1Q8N9U9 137 aa11.53□□□□□ -0.56
CCDC85B-201ENST00000312579 HRES1P13985 223 aa11.5□□□□□ -0.57
CCDC85B-201ENST00000312579 KRTAP19-2Q3LHN2 52 aa11.42□□□□□ -0.58
CCDC85B-201ENST00000312579 MPLKIPQ8TAP9 179 aa11.37□□□□□ -0.59
CCDC85B-201ENST00000312579 C4orf26Q17RF5 130 aa11.35□□□□□ -0.59
CCDC85B-201ENST00000312579 LCE2CQ5TA81 110 aa11.34□□□□□ -0.59
CCDC85B-201ENST00000312579 COX6B2Q6YFQ2 88 aa11.31□□□□□ -0.6
CCDC85B-201ENST00000312579 DMAC1Q96GE9 116 aa11.31□□□□□ -0.6
CCDC85B-201ENST00000312579 FAT4Q6V0I7 4981 aa11.31□□□□□ -0.6
CCDC85B-201ENST00000312579 RBM12B-AS1Q9P1G2 102 aa11.3□□□□□ -0.6
CCDC85B-201ENST00000312579 SERP1Q9Y6X1 66 aa11.3□□□□□ -0.6
CCDC85B-201ENST00000312579 ACYP2P14621 99 aa11.25□□□□□ -0.61
CCDC85B-201ENST00000312579 A8MUN3 132 aa11.23□□□□□ -0.61
CCDC85B-201ENST00000312579 RPS28P62857 69 aaKnown RBP11.19□□□□□ -0.62
CCDC85B-201ENST00000312579 COA5Q86WW8 74 aa11.19□□□□□ -0.62
CCDC85B-201ENST00000312579 KRTAP3-1Q9BYR8 98 aa11.16□□□□□ -0.62
CCDC85B-201ENST00000312579 MT1HP80294 61 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms