RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 LIMD2Q9BT23 127 aa9.96□□□□□ -0.81
SWSAP1-201ENST00000312423 CYSTM1Q9H1C7 97 aa9.96□□□□□ -0.82
SWSAP1-201ENST00000312423 IGFL1Q6UW32 110 aa9.95□□□□□ -0.82
SWSAP1-201ENST00000312423 HMCN2Q8NDA2 5059 aa9.94□□□□□ -0.82
SWSAP1-201ENST00000312423 TRAV7A0A075B6U4 112 aa9.93□□□□□ -0.82
SWSAP1-201ENST00000312423 IGLV7-46A0A075B6I9 117 aa9.91□□□□□ -0.82
SWSAP1-201ENST00000312423 TMEM258P61165 79 aa9.9□□□□□ -0.82
SWSAP1-201ENST00000312423 A0A1W2PNM2 257 aa9.9□□□□□ -0.83
SWSAP1-201ENST00000312423 NREPQ16612 68 aa9.9□□□□□ -0.83
SWSAP1-201ENST00000312423 FP248Q71RG6 208 aaPredicted RBP9.89□□□□□ -0.83
SWSAP1-201ENST00000312423 IGKV4-1P06312 121 aa9.87□□□□□ -0.83
SWSAP1-201ENST00000312423 RPS28P62857 69 aaKnown RBP9.86□□□□□ -0.83
SWSAP1-201ENST00000312423 Q5XG85 94 aa9.83□□□□□ -0.84
SWSAP1-201ENST00000312423 BPY2O14599 106 aa9.83□□□□□ -0.84
SWSAP1-201ENST00000312423 KLKP1Q107X0 134 aa9.82□□□□□ -0.84
SWSAP1-201ENST00000312423 C20orf197Q8N268 126 aa9.82□□□□□ -0.84
SWSAP1-201ENST00000312423 TPRXLQ17RH7 258 aa9.81□□□□□ -0.84
SWSAP1-201ENST00000312423 J3KT08 172 aa9.8□□□□□ -0.84
SWSAP1-201ENST00000312423 Q8N9L7 120 aa9.79□□□□□ -0.84
SWSAP1-201ENST00000312423 C1orf195Q5TG92 126 aa9.78□□□□□ -0.84
SWSAP1-201ENST00000312423 LRP2P98164 4655 aa9.77□□□□□ -0.85
SWSAP1-201ENST00000312423 LPAP08519 4548 aa9.76□□□□□ -0.85
SWSAP1-201ENST00000312423 A0A087WSZ3 146 aa9.76□□□□□ -0.85
SWSAP1-201ENST00000312423 H7BZZ5 65 aa9.76□□□□□ -0.85
SWSAP1-201ENST00000312423 OCR1Q9BZK8 76 aa9.76□□□□□ -0.85
SWSAP1-201ENST00000312423 V9GYY9 64 aa9.76□□□□□ -0.85
SWSAP1-201ENST00000312423 KRTAP13-3Q3SY46 172 aa9.74□□□□□ -0.85
SWSAP1-201ENST00000312423 ASB16-AS1Q495Z4 193 aa9.74□□□□□ -0.85
SWSAP1-201ENST00000312423 DSCR10P59022 87 aa9.73□□□□□ -0.85
SWSAP1-201ENST00000312423 NDUFC1O43677 76 aa9.7□□□□□ -0.86
SWSAP1-201ENST00000312423 FAM236DA0A1B0GTK5 79 aa9.68□□□□□ -0.86
SWSAP1-201ENST00000312423 FAM236CP0DP71 79 aa9.68□□□□□ -0.86
SWSAP1-201ENST00000312423 SNURFQ9Y675 71 aa9.68□□□□□ -0.86
SWSAP1-201ENST00000312423 C9orf92A6NGG3 77 aa9.67□□□□□ -0.86
SWSAP1-201ENST00000312423 TMEM254Q8TBM7 123 aa9.67□□□□□ -0.86
SWSAP1-201ENST00000312423 A0A0U1RQV1 116 aa9.65□□□□□ -0.86
SWSAP1-201ENST00000312423 K7EQZ3 153 aa9.64□□□□□ -0.87
SWSAP1-201ENST00000312423 PRO0628Q9UI54 55 aa9.64□□□□□ -0.87
SWSAP1-201ENST00000312423 UBR4Q5T4S7 5183 aa9.63□□□□□ -0.87
SWSAP1-201ENST00000312423 XP32Q5T750 250 aa9.61□□□□□ -0.87
SWSAP1-201ENST00000312423 SERP1Q9Y6X1 66 aa9.61□□□□□ -0.87
SWSAP1-201ENST00000312423 ATP5EP56381 51 aaPredicted RBP9.6□□□□□ -0.87
SWSAP1-201ENST00000312423 Q96NJ1 140 aa9.6□□□□□ -0.87
SWSAP1-201ENST00000312423 HCG22E2RYF7 251 aa9.58□□□□□ -0.88
SWSAP1-201ENST00000312423 DEFB116Q30KQ4 102 aa9.57□□□□□ -0.88
SWSAP1-201ENST00000312423 LINC00472Q9H8W2 130 aa9.55□□□□□ -0.88
SWSAP1-201ENST00000312423 ZCCHC13Q8WW36 166 aaKnown RBP9.53□□□□□ -0.88
SWSAP1-201ENST00000312423 SEC61BP60468 96 aaKnown RBP9.51□□□□□ -0.89
SWSAP1-201ENST00000312423 A8MWP4 228 aa9.48□□□□□ -0.89
SWSAP1-201ENST00000312423 PRR15Q8IV56 129 aa9.48□□□□□ -0.89
SWSAP1-201ENST00000312423 LCE2DQ5TA82 110 aaPredicted RBP9.46□□□□□ -0.89
SWSAP1-201ENST00000312423 IGHV6-1A0A0B4J1U7 121 aa9.45□□□□□ -0.9
SWSAP1-201ENST00000312423 WFDC13Q8IUB5 93 aa9.44□□□□□ -0.9
SWSAP1-201ENST00000312423 RPL37P61927 97 aaKnown RBP9.43□□□□□ -0.9
SWSAP1-201ENST00000312423 SMIM26A0A096LP01 95 aa9.42□□□□□ -0.9
SWSAP1-201ENST00000312423 LINC00313P59037 77 aa9.42□□□□□ -0.9
SWSAP1-201ENST00000312423 PCOTHQ58A44 107 aa9.42□□□□□ -0.9
SWSAP1-201ENST00000312423 CASC2Q6XLA1 102 aa9.42□□□□□ -0.9
SWSAP1-201ENST00000312423 RNF213Q63HN8 5207 aa9.41□□□□□ -0.9
SWSAP1-201ENST00000312423 A0A1B0GVX0 72 aa9.4□□□□□ -0.9
SWSAP1-201ENST00000312423 NDUFB1O75438 58 aa9.4□□□□□ -0.9
SWSAP1-201ENST00000312423 C4orf26Q17RF5 130 aa9.4□□□□□ -0.9
SWSAP1-201ENST00000312423 MMP24-AS1A0A0U1RRL7 71 aa9.38□□□□□ -0.91
SWSAP1-201ENST00000312423 H3BPC8 53 aa9.37□□□□□ -0.91
SWSAP1-201ENST00000312423 Q75L30 129 aa9.37□□□□□ -0.91
SWSAP1-201ENST00000312423 NOTCH2NLQ7Z3S9 236 aa9.37□□□□□ -0.91
SWSAP1-201ENST00000312423 C8orf87E5RJ46 101 aa9.36□□□□□ -0.91
SWSAP1-201ENST00000312423 MP68P56378 58 aa9.35□□□□□ -0.91
SWSAP1-201ENST00000312423 MUC17Q685J3 4493 aa9.34□□□□□ -0.91
SWSAP1-201ENST00000312423 ATP11AUNQ6ZP68 121 aa9.34□□□□□ -0.91
SWSAP1-201ENST00000312423 C20orf166-AS1Q96NR2 134 aa9.33□□□□□ -0.92
SWSAP1-201ENST00000312423 CYP4F30PQ9H0H9 118 aa9.33□□□□□ -0.92
SWSAP1-201ENST00000312423 KRTAP4-1Q9BYQ7 146 aa9.32□□□□□ -0.92
SWSAP1-201ENST00000312423 TRAV22A0A0B4J277 110 aa9.32□□□□□ -0.92
SWSAP1-201ENST00000312423 A8MUU9 505 aa9.32□□□□□ -0.92
SWSAP1-201ENST00000312423 hDV103S1A0JD37 113 aa9.31□□□□□ -0.92
SWSAP1-201ENST00000312423 KRTAP16-1A8MUX0 517 aa9.31□□□□□ -0.92
SWSAP1-201ENST00000312423 H0Y9P7 68 aa9.3□□□□□ -0.92
SWSAP1-201ENST00000312423 LINC00208Q96KT6 92 aa9.29□□□□□ -0.92
SWSAP1-201ENST00000312423 MUC2Q02817 5179 aa9.29□□□□□ -0.92
SWSAP1-201ENST00000312423 C8orf17Q9NRJ1 99 aa9.28□□□□□ -0.92
SWSAP1-201ENST00000312423 SPANXA2-OT1Q8N9U9 137 aa9.26□□□□□ -0.93
SWSAP1-201ENST00000312423 C1orf64Q8NEQ6 169 aa9.25□□□□□ -0.93
SWSAP1-201ENST00000312423 TP53AIP1Q9HCN2 124 aa9.25□□□□□ -0.93
SWSAP1-201ENST00000312423 MRPL34Q9BQ48 92 aaKnown RBP9.16□□□□□ -0.94
SWSAP1-201ENST00000312423 Q8N9P0 234 aaPredicted RBP9.15□□□□□ -0.94
SWSAP1-201ENST00000312423 PMAIP1Q13794 54 aa9.14□□□□□ -0.95
SWSAP1-201ENST00000312423 Q1T7F1 81 aa9.13□□□□□ -0.95
SWSAP1-201ENST00000312423 NDUFS5O43920 106 aa9.12□□□□□ -0.95
SWSAP1-201ENST00000312423 MPLKIPQ8TAP9 179 aa9.12□□□□□ -0.95
SWSAP1-201ENST00000312423 COX6B2Q6YFQ2 88 aa9.04□□□□□ -0.96
SWSAP1-201ENST00000312423 KRTAP19-2Q3LHN2 52 aa9.01□□□□□ -0.97
SWSAP1-201ENST00000312423 FAT4Q6V0I7 4981 aa9□□□□□ -0.97
SWSAP1-201ENST00000312423 LOC101927531A0A1B0GV80 90 aa9□□□□□ -0.97
SWSAP1-201ENST00000312423 Q5W150 140 aa8.99□□□□□ -0.97
SWSAP1-201ENST00000312423 LCE2CQ5TA81 110 aa8.98□□□□□ -0.97
SWSAP1-201ENST00000312423 SPINK7P58062 85 aa8.97□□□□□ -0.97
SWSAP1-201ENST00000312423 LCE2AQ5TA79 106 aaPredicted RBP8.97□□□□□ -0.97
SWSAP1-201ENST00000312423 COA5Q86WW8 74 aa8.97□□□□□ -0.97
SWSAP1-201ENST00000312423 H3BS24 57 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms