RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 KRTAP10-4P60372 401 aaPredicted RBP12.33□□□□□ -0.44
ATG4D-201ENST00000309469 C5orf47Q569G3 176 aa12.32□□□□□ -0.44
ATG4D-201ENST00000309469 TYMSOSQ8TAI1 123 aa12.32□□□□□ -0.44
ATG4D-201ENST00000309469 Q5XG85 94 aa12.31□□□□□ -0.44
ATG4D-201ENST00000309469 IGHV6-1A0A0B4J1U7 121 aa12.3□□□□□ -0.44
ATG4D-201ENST00000309469 C8orf17Q9NRJ1 99 aa12.3□□□□□ -0.44
ATG4D-201ENST00000309469 hDV103S1A0JD37 113 aa12.29□□□□□ -0.44
ATG4D-201ENST00000309469 PRR26Q8N8Z3 221 aa12.25□□□□□ -0.45
ATG4D-201ENST00000309469 C4orf48Q5BLP8 95 aa12.25□□□□□ -0.45
ATG4D-201ENST00000309469 LIMD2Q9BT23 127 aa12.23□□□□□ -0.45
ATG4D-201ENST00000309469 C1orf195Q5TG92 126 aa12.22□□□□□ -0.45
ATG4D-201ENST00000309469 ZCCHC13Q8WW36 166 aaKnown RBP12.22□□□□□ -0.45
ATG4D-201ENST00000309469 FAT1Q14517 4588 aa12.22□□□□□ -0.45
ATG4D-201ENST00000309469 MP68P56378 58 aa12.21□□□□□ -0.45
ATG4D-201ENST00000309469 NOTCH2NLQ7Z3S9 236 aa12.21□□□□□ -0.46
ATG4D-201ENST00000309469 SPINK1P00995 79 aa12.2□□□□□ -0.46
ATG4D-201ENST00000309469 RYR3Q15413 4870 aa12.17□□□□□ -0.46
ATG4D-201ENST00000309469 SMIM26A0A096LP01 95 aa12.17□□□□□ -0.46
ATG4D-201ENST00000309469 H0Y9P7 68 aa12.16□□□□□ -0.46
ATG4D-201ENST00000309469 LINC00304Q8N9R0 145 aa12.15□□□□□ -0.46
ATG4D-201ENST00000309469 MRPL34Q9BQ48 92 aaKnown RBP12.15□□□□□ -0.46
ATG4D-201ENST00000309469 C4orf26Q17RF5 130 aa12.15□□□□□ -0.46
ATG4D-201ENST00000309469 FAM229AH3BQW9 127 aa12.14□□□□□ -0.47
ATG4D-201ENST00000309469 C8orf87E5RJ46 101 aa12.13□□□□□ -0.47
ATG4D-201ENST00000309469 SPAG11AQ6PDA7 123 aa12.13□□□□□ -0.47
ATG4D-201ENST00000309469 LINC00208Q96KT6 92 aa12.13□□□□□ -0.47
ATG4D-201ENST00000309469 TP53AIP1Q9HCN2 124 aa12.13□□□□□ -0.47
ATG4D-201ENST00000309469 H3BPC8 53 aa12.12□□□□□ -0.47
ATG4D-201ENST00000309469 TRAV22A0A0B4J277 110 aa12.11□□□□□ -0.47
ATG4D-201ENST00000309469 RPS29P62273 56 aaKnown RBP12.1□□□□□ -0.47
ATG4D-201ENST00000309469 NDUFS5O43920 106 aa12.09□□□□□ -0.47
ATG4D-201ENST00000309469 LINC00313P59037 77 aa12.07□□□□□ -0.48
ATG4D-201ENST00000309469 FP248Q71RG6 208 aaPredicted RBP12.05□□□□□ -0.48
ATG4D-201ENST00000309469 C1orf64Q8NEQ6 169 aa12.04□□□□□ -0.48
ATG4D-201ENST00000309469 Q5VSD8 79 aa12.03□□□□□ -0.48
ATG4D-201ENST00000309469 HSPG2P98160 4391 aa11.98□□□□□ -0.49
ATG4D-201ENST00000309469 PKHD1L1Q86WI1 4243 aa11.97□□□□□ -0.49
ATG4D-201ENST00000309469 KRTAP16-1A8MUX0 517 aa11.94□□□□□ -0.5
ATG4D-201ENST00000309469 Q8N9P0 234 aaPredicted RBP11.94□□□□□ -0.5
ATG4D-201ENST00000309469 CYP4F30PQ9H0H9 118 aa11.91□□□□□ -0.5
ATG4D-201ENST00000309469 PRR4Q16378 134 aa11.9□□□□□ -0.5
ATG4D-201ENST00000309469 SPANXA2-OT1Q8N9U9 137 aa11.9□□□□□ -0.5
ATG4D-201ENST00000309469 KRTAP17-1Q9BYP8 105 aa11.9□□□□□ -0.5
ATG4D-201ENST00000309469 Q5W150 140 aa11.9□□□□□ -0.51
ATG4D-201ENST00000309469 RYR1P21817 5038 aa11.88□□□□□ -0.51
ATG4D-201ENST00000309469 KRTAP13-3Q3SY46 172 aa11.87□□□□□ -0.51
ATG4D-201ENST00000309469 KRTAP10-8P60410 259 aa11.86□□□□□ -0.51
ATG4D-201ENST00000309469 PRO0628Q9UI54 55 aa11.84□□□□□ -0.51
ATG4D-201ENST00000309469 PCOTHQ58A44 107 aa11.83□□□□□ -0.52
ATG4D-201ENST00000309469 Q8N1X5 172 aa11.83□□□□□ -0.52
ATG4D-201ENST00000309469 LOC101927531A0A1B0GV80 90 aa11.8□□□□□ -0.52
ATG4D-201ENST00000309469 IGLV7-46A0A075B6I9 117 aa11.78□□□□□ -0.52
ATG4D-201ENST00000309469 RETNLBQ9BQ08 111 aa11.78□□□□□ -0.52
ATG4D-201ENST00000309469 KIAA1109Q2LD37 5005 aa11.76□□□□□ -0.53
ATG4D-201ENST00000309469 Q1T7F1 81 aa11.76□□□□□ -0.53
ATG4D-201ENST00000309469 LRP1Q07954 4544 aaKnown RBP11.74□□□□□ -0.53
ATG4D-201ENST00000309469 MPLKIPQ8TAP9 179 aa11.74□□□□□ -0.53
ATG4D-201ENST00000309469 EPPK1P58107 5090 aaKnown RBP11.73□□□□□ -0.53
ATG4D-201ENST00000309469 TNXBP22105 4242 aa11.71□□□□□ -0.54
ATG4D-201ENST00000309469 C9orf92A6NGG3 77 aa11.7□□□□□ -0.54
ATG4D-201ENST00000309469 FLG2Q5D862 2391 aaPredicted RBP11.68□□□□□ -0.54
ATG4D-201ENST00000309469 IGKV2-30P06310 120 aa11.65□□□□□ -0.54
ATG4D-201ENST00000309469 FAT3Q8TDW7 4589 aa11.65□□□□□ -0.54
ATG4D-201ENST00000309469 V9GYY9 64 aa11.63□□□□□ -0.55
ATG4D-201ENST00000309469 MT1HL1P0DM35 61 aa11.62□□□□□ -0.55
ATG4D-201ENST00000309469 C20orf166-AS1Q96NR2 134 aa11.62□□□□□ -0.55
ATG4D-201ENST00000309469 A8MUU9 505 aa11.61□□□□□ -0.55
ATG4D-201ENST00000309469 BRK1Q8WUW1 75 aa11.6□□□□□ -0.55
ATG4D-201ENST00000309469 COA5Q86WW8 74 aa11.59□□□□□ -0.55
ATG4D-201ENST00000309469 IGKV2D-30A0A075B6S6 120 aa11.55□□□□□ -0.56
ATG4D-201ENST00000309469 HRES1P13985 223 aa11.54□□□□□ -0.56
ATG4D-201ENST00000309469 KRTAP4-5Q9BYR2 181 aa11.49□□□□□ -0.57
ATG4D-201ENST00000309469 MYCBP2O75592 4640 aa11.48□□□□□ -0.57
ATG4D-201ENST00000309469 Q75L30 129 aa11.47□□□□□ -0.57
ATG4D-201ENST00000309469 C7orf65Q6ZTY9 151 aa11.45□□□□□ -0.58
ATG4D-201ENST00000309469 DMBT1Q9UGM3 2413 aaPredicted RBP11.44□□□□□ -0.58
ATG4D-201ENST00000309469 DMAC1Q96GE9 116 aa11.43□□□□□ -0.58
ATG4D-201ENST00000309469 ACYP2P14621 99 aa11.43□□□□□ -0.58
ATG4D-201ENST00000309469 PSPHP1O15172 72 aa11.42□□□□□ -0.58
ATG4D-201ENST00000309469 A8MUN3 132 aa11.38□□□□□ -0.59
ATG4D-201ENST00000309469 Q5VV11 94 aa11.37□□□□□ -0.59
ATG4D-201ENST00000309469 XP32Q5T750 250 aa11.32□□□□□ -0.6
ATG4D-201ENST00000309469 RPL37P61927 97 aaKnown RBP11.31□□□□□ -0.6
ATG4D-201ENST00000309469 SPINK7P58062 85 aa11.3□□□□□ -0.6
ATG4D-201ENST00000309469 ATP11AUNQ6ZP68 121 aa11.3□□□□□ -0.6
ATG4D-201ENST00000309469 CHKB-CPT1BH3BT56 60 aa11.29□□□□□ -0.6
ATG4D-201ENST00000309469 PRR15LQ9BU68 103 aa11.25□□□□□ -0.61
ATG4D-201ENST00000309469 LINC01558Q9Y6Z2 57 aa11.24□□□□□ -0.61
ATG4D-201ENST00000309469 TPRXLQ17RH7 258 aa11.19□□□□□ -0.62
ATG4D-201ENST00000309469 BIRC6Q9NR09 4857 aa11.15□□□□□ -0.62
ATG4D-201ENST00000309469 J3QL48 77 aa11.14□□□□□ -0.63
ATG4D-201ENST00000309469 ABCA13Q86UQ4 5058 aa11.13□□□□□ -0.63
ATG4D-201ENST00000309469 HERC2O95714 4834 aa11.12□□□□□ -0.63
ATG4D-201ENST00000309469 KRTAP3-1Q9BYR8 98 aa11.09□□□□□ -0.63
ATG4D-201ENST00000309469 A6NED7 52 aa11.07□□□□□ -0.64
ATG4D-201ENST00000309469 PMAIP1Q13794 54 aa11.07□□□□□ -0.64
ATG4D-201ENST00000309469 CDC42SE1Q9NRR8 79 aa11.05□□□□□ -0.64
ATG4D-201ENST00000309469 COX6B2Q6YFQ2 88 aa11.05□□□□□ -0.64
ATG4D-201ENST00000309469 LCA10Q71F78 164 aa11.05□□□□□ -0.64
ATG4D-201ENST00000309469 A8MU10 97 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms