RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 hDV103S1A0JD37 113 aa11.21□□□□□ -0.61
SHF-201ENST00000290894 MPLKIPQ8TAP9 179 aa11.2□□□□□ -0.62
SHF-201ENST00000290894 FAM229BQ4G0N7 80 aa11.19□□□□□ -0.62
SHF-201ENST00000290894 NOTCH2NLQ7Z3S9 236 aa11.19□□□□□ -0.62
SHF-201ENST00000290894 LINC00208Q96KT6 92 aa11.18□□□□□ -0.62
SHF-201ENST00000290894 CDK2AP2O75956 126 aa11.17□□□□□ -0.62
SHF-201ENST00000290894 MP68P56378 58 aa11.16□□□□□ -0.62
SHF-201ENST00000290894 KRTAP13-2Q52LG2 175 aa11.16□□□□□ -0.62
SHF-201ENST00000290894 A0A1B0GVX0 72 aa11.16□□□□□ -0.62
SHF-201ENST00000290894 C8orf17Q9NRJ1 99 aa11.16□□□□□ -0.62
SHF-201ENST00000290894 H0Y9P7 68 aa11.15□□□□□ -0.62
SHF-201ENST00000290894 PRR4Q16378 134 aa11.15□□□□□ -0.62
SHF-201ENST00000290894 RBM12B-AS1Q9P1G2 102 aa11.13□□□□□ -0.63
SHF-201ENST00000290894 NDUFS5O43920 106 aa11.12□□□□□ -0.63
SHF-201ENST00000290894 SSBP3-AS1Q7Z2R9 100 aa11.12□□□□□ -0.63
SHF-201ENST00000290894 KMT2CQ8NEZ4 4911 aaKnown RBP11.12□□□□□ -0.63
SHF-201ENST00000290894 KTN1-AS1Q86SY8 53 aa11.1□□□□□ -0.63
SHF-201ENST00000290894 DYNC1H1Q14204 4646 aaKnown RBP11.1□□□□□ -0.63
SHF-201ENST00000290894 KRTAP1-4P0C5Y4 121 aa11.09□□□□□ -0.63
SHF-201ENST00000290894 C1orf64Q8NEQ6 169 aa11.09□□□□□ -0.63
SHF-201ENST00000290894 SMR3BP02814 79 aaPredicted RBP11.09□□□□□ -0.63
SHF-201ENST00000290894 Q1T7F1 81 aa11.09□□□□□ -0.63
SHF-201ENST00000290894 TRAV22A0A0B4J277 110 aa11.08□□□□□ -0.64
SHF-201ENST00000290894 ASB16-AS1Q495Z4 193 aa11.07□□□□□ -0.64
SHF-201ENST00000290894 PLA2G1BP04054 148 aaKnown RBP11.04□□□□□ -0.64
SHF-201ENST00000290894 FAT1Q14517 4588 aa11.04□□□□□ -0.64
SHF-201ENST00000290894 MRPL34Q9BQ48 92 aaKnown RBP11.02□□□□□ -0.64
SHF-201ENST00000290894 CYP4F30PQ9H0H9 118 aa11.02□□□□□ -0.65
SHF-201ENST00000290894 H3BPC8 53 aa11.01□□□□□ -0.65
SHF-201ENST00000290894 RYR2Q92736 4967 aa11□□□□□ -0.65
SHF-201ENST00000290894 PCOTHQ58A44 107 aa10.96□□□□□ -0.66
SHF-201ENST00000290894 TP53AIP1Q9HCN2 124 aa10.96□□□□□ -0.66
SHF-201ENST00000290894 A0A1B0GVY2 172 aa10.95□□□□□ -0.66
SHF-201ENST00000290894 TYMSOSQ8TAI1 123 aa10.95□□□□□ -0.66
SHF-201ENST00000290894 APOBP04114 4563 aaKnown RBP10.95□□□□□ -0.66
SHF-201ENST00000290894 PRR26Q8N8Z3 221 aa10.93□□□□□ -0.66
SHF-201ENST00000290894 H3BS24 57 aa10.92□□□□□ -0.66
SHF-201ENST00000290894 SPANXA2-OT1Q8N9U9 137 aa10.92□□□□□ -0.66
SHF-201ENST00000290894 Q5W150 140 aa10.91□□□□□ -0.66
SHF-201ENST00000290894 LINC00313P59037 77 aa10.88□□□□□ -0.67
SHF-201ENST00000290894 RETNLBQ9BQ08 111 aa10.87□□□□□ -0.67
SHF-201ENST00000290894 C8orf87E5RJ46 101 aa10.86□□□□□ -0.67
SHF-201ENST00000290894 LIMD2Q9BT23 127 aa10.85□□□□□ -0.67
SHF-201ENST00000290894 ATP11AUNQ6ZP68 121 aa10.81□□□□□ -0.68
SHF-201ENST00000290894 IGLV7-46A0A075B6I9 117 aa10.8□□□□□ -0.68
SHF-201ENST00000290894 PSPHP1O15172 72 aa10.8□□□□□ -0.68
SHF-201ENST00000290894 SPINK1P00995 79 aa10.79□□□□□ -0.68
SHF-201ENST00000290894 LINC00304Q8N9R0 145 aa10.79□□□□□ -0.68
SHF-201ENST00000290894 KRTAP10-4P60372 401 aaPredicted RBP10.78□□□□□ -0.68
SHF-201ENST00000290894 KRTAP13-3Q3SY46 172 aa10.77□□□□□ -0.69
SHF-201ENST00000290894 LCA10Q71F78 164 aa10.76□□□□□ -0.69
SHF-201ENST00000290894 RYR3Q15413 4870 aa10.76□□□□□ -0.69
SHF-201ENST00000290894 KRTAP16-1A8MUX0 517 aa10.74□□□□□ -0.69
SHF-201ENST00000290894 C7orf65Q6ZTY9 151 aa10.73□□□□□ -0.69
SHF-201ENST00000290894 Q8N9P0 234 aaPredicted RBP10.73□□□□□ -0.69
SHF-201ENST00000290894 A6NN06 94 aa10.72□□□□□ -0.69
SHF-201ENST00000290894 COA5Q86WW8 74 aa10.72□□□□□ -0.69
SHF-201ENST00000290894 A8MUN3 132 aa10.71□□□□□ -0.7
SHF-201ENST00000290894 LOC101927531A0A1B0GV80 90 aa10.7□□□□□ -0.7
SHF-201ENST00000290894 Q5VV11 94 aa10.68□□□□□ -0.7
SHF-201ENST00000290894 A8MU10 97 aa10.67□□□□□ -0.7
SHF-201ENST00000290894 FAM229AH3BQW9 127 aa10.66□□□□□ -0.7
SHF-201ENST00000290894 LRP1Q07954 4544 aaKnown RBP10.66□□□□□ -0.7
SHF-201ENST00000290894 PKHD1L1Q86WI1 4243 aa10.65□□□□□ -0.71
SHF-201ENST00000290894 SPTSSBQ8NFR3 76 aa10.63□□□□□ -0.71
SHF-201ENST00000290894 CHKB-CPT1BH3BT56 60 aa10.62□□□□□ -0.71
SHF-201ENST00000290894 SPAG11AQ6PDA7 123 aa10.62□□□□□ -0.71
SHF-201ENST00000290894 HSPG2P98160 4391 aa10.6□□□□□ -0.71
SHF-201ENST00000290894 C9orf92A6NGG3 77 aa10.59□□□□□ -0.71
SHF-201ENST00000290894 FLG2Q5D862 2391 aaPredicted RBP10.59□□□□□ -0.71
SHF-201ENST00000290894 IGKV2D-30A0A075B6S6 120 aa10.58□□□□□ -0.72
SHF-201ENST00000290894 IGKV2-30P06310 120 aa10.58□□□□□ -0.72
SHF-201ENST00000290894 HRES1P13985 223 aa10.58□□□□□ -0.72
SHF-201ENST00000290894 PRR15LQ9BU68 103 aa10.58□□□□□ -0.72
SHF-201ENST00000290894 RPS29P62273 56 aaKnown RBP10.57□□□□□ -0.72
SHF-201ENST00000290894 Q75L30 129 aa10.53□□□□□ -0.72
SHF-201ENST00000290894 CDC42SE1Q9NRR8 79 aa10.52□□□□□ -0.73
SHF-201ENST00000290894 DMBT1Q9UGM3 2413 aaPredicted RBP10.51□□□□□ -0.73
SHF-201ENST00000290894 Q5VSD8 79 aa10.5□□□□□ -0.73
SHF-201ENST00000290894 KIAA1109Q2LD37 5005 aa10.48□□□□□ -0.73
SHF-201ENST00000290894 KRTAP17-1Q9BYP8 105 aa10.47□□□□□ -0.73
SHF-201ENST00000290894 TNXBP22105 4242 aa10.47□□□□□ -0.73
SHF-201ENST00000290894 A6NED7 52 aa10.46□□□□□ -0.74
SHF-201ENST00000290894 Q8N1X5 172 aa10.46□□□□□ -0.74
SHF-201ENST00000290894 RYR1P21817 5038 aa10.45□□□□□ -0.74
SHF-201ENST00000290894 MYCBP2O75592 4640 aa10.44□□□□□ -0.74
SHF-201ENST00000290894 LINC01554Q52M75 96 aa10.44□□□□□ -0.74
SHF-201ENST00000290894 LINC01558Q9Y6Z2 57 aa10.44□□□□□ -0.74
SHF-201ENST00000290894 ACYP2P14621 99 aa10.42□□□□□ -0.74
SHF-201ENST00000290894 DMAC1Q96GE9 116 aa10.41□□□□□ -0.74
SHF-201ENST00000290894 EPPK1P58107 5090 aaKnown RBP10.38□□□□□ -0.75
SHF-201ENST00000290894 FAT3Q8TDW7 4589 aa10.37□□□□□ -0.75
SHF-201ENST00000290894 KRTAP10-8P60410 259 aa10.33□□□□□ -0.76
SHF-201ENST00000290894 C20orf166-AS1Q96NR2 134 aa10.33□□□□□ -0.76
SHF-201ENST00000290894 A8MUU9 505 aa10.32□□□□□ -0.76
SHF-201ENST00000290894 SPINK7P58062 85 aa10.26□□□□□ -0.77
SHF-201ENST00000290894 PRAC1Q96KF2 57 aa10.15□□□□□ -0.78
SHF-201ENST00000290894 MT1HL1P0DM35 61 aa10.14□□□□□ -0.79
SHF-201ENST00000290894 A0A1B0GU69 56 aa10.12□□□□□ -0.79
SHF-201ENST00000290894 KRTAP3-1Q9BYR8 98 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms