RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 LINC00304Q8N9R0 145 aa10.23□□□□□ -0.77
SEC22C-202ENST00000273156 IGKV4-1P06312 121 aa10.22□□□□□ -0.77
SEC22C-202ENST00000273156 Q96NJ1 140 aa10.22□□□□□ -0.77
SEC22C-202ENST00000273156 FAM236AA0A1B0GUQ0 79 aa10.22□□□□□ -0.77
SEC22C-202ENST00000273156 FAM236BA0A1B0GV22 79 aa10.22□□□□□ -0.77
SEC22C-202ENST00000273156 PRR4Q16378 134 aa10.22□□□□□ -0.77
SEC22C-202ENST00000273156 A8MWP4 228 aa10.19□□□□□ -0.78
SEC22C-202ENST00000273156 K7EQZ3 153 aa10.19□□□□□ -0.78
SEC22C-202ENST00000273156 NDUFB1O75438 58 aa10.18□□□□□ -0.78
SEC22C-202ENST00000273156 RPS29P62273 56 aaKnown RBP10.18□□□□□ -0.78
SEC22C-202ENST00000273156 RNF213Q63HN8 5207 aa10.16□□□□□ -0.78
SEC22C-202ENST00000273156 PCP4P48539 62 aa10.15□□□□□ -0.78
SEC22C-202ENST00000273156 PRR15Q8IV56 129 aa10.15□□□□□ -0.78
SEC22C-202ENST00000273156 ATOX1O00244 68 aa10.11□□□□□ -0.79
SEC22C-202ENST00000273156 C1orf195Q5TG92 126 aa10.11□□□□□ -0.79
SEC22C-202ENST00000273156 HCG22E2RYF7 251 aa10.09□□□□□ -0.79
SEC22C-202ENST00000273156 ANAPC13Q9BS18 74 aa10.09□□□□□ -0.79
SEC22C-202ENST00000273156 A0A1B0GVX0 72 aa10.08□□□□□ -0.8
SEC22C-202ENST00000273156 LPAP08519 4548 aa10.08□□□□□ -0.8
SEC22C-202ENST00000273156 IGHV6-1A0A0B4J1U7 121 aa10.05□□□□□ -0.8
SEC22C-202ENST00000273156 SMIM20Q8N5G0 67 aa10.04□□□□□ -0.8
SEC22C-202ENST00000273156 CASC2Q6XLA1 102 aa10.03□□□□□ -0.8
SEC22C-202ENST00000273156 WFDC13Q8IUB5 93 aa10.03□□□□□ -0.8
SEC22C-202ENST00000273156 C8orf17Q9NRJ1 99 aa10.02□□□□□ -0.81
SEC22C-202ENST00000273156 MMP24-AS1A0A0U1RRL7 71 aa10□□□□□ -0.81
SEC22C-202ENST00000273156 hDV103S1A0JD37 113 aa9.99□□□□□ -0.81
SEC22C-202ENST00000273156 C8orf87E5RJ46 101 aa9.99□□□□□ -0.81
SEC22C-202ENST00000273156 RETNLBQ9BQ08 111 aa9.98□□□□□ -0.81
SEC22C-202ENST00000273156 SERP2Q8N6R1 65 aa9.97□□□□□ -0.81
SEC22C-202ENST00000273156 IGLV7-46A0A075B6I9 117 aa9.96□□□□□ -0.81
SEC22C-202ENST00000273156 TPRXLQ17RH7 258 aa9.96□□□□□ -0.81
SEC22C-202ENST00000273156 TRAV7A0A075B6U4 112 aa9.96□□□□□ -0.82
SEC22C-202ENST00000273156 LINC00313P59037 77 aa9.95□□□□□ -0.82
SEC22C-202ENST00000273156 FP248Q71RG6 208 aaPredicted RBP9.94□□□□□ -0.82
SEC22C-202ENST00000273156 A0A0U1RQV1 116 aa9.93□□□□□ -0.82
SEC22C-202ENST00000273156 NOTCH2NLQ7Z3S9 236 aa9.93□□□□□ -0.82
SEC22C-202ENST00000273156 COX7CP15954 63 aa9.93□□□□□ -0.82
SEC22C-202ENST00000273156 TMEM254Q8TBM7 123 aa9.93□□□□□ -0.82
SEC22C-202ENST00000273156 OCR1Q9BZK8 76 aa9.93□□□□□ -0.82
SEC22C-202ENST00000273156 MRPL34Q9BQ48 92 aaKnown RBP9.91□□□□□ -0.82
SEC22C-202ENST00000273156 UQCRQO14949 82 aa9.9□□□□□ -0.82
SEC22C-202ENST00000273156 MUC2Q02817 5179 aa9.86□□□□□ -0.83
SEC22C-202ENST00000273156 TP53AIP1Q9HCN2 124 aa9.85□□□□□ -0.83
SEC22C-202ENST00000273156 CCDC179H3BU77 68 aa9.84□□□□□ -0.83
SEC22C-202ENST00000273156 NDUFS5O43920 106 aa9.84□□□□□ -0.83
SEC22C-202ENST00000273156 C5orf47Q569G3 176 aa9.81□□□□□ -0.84
SEC22C-202ENST00000273156 KRTAP16-1A8MUX0 517 aa9.79□□□□□ -0.84
SEC22C-202ENST00000273156 Q8N9P0 234 aaPredicted RBP9.78□□□□□ -0.84
SEC22C-202ENST00000273156 C20orf197Q8N268 126 aa9.78□□□□□ -0.84
SEC22C-202ENST00000273156 KRTAP13-3Q3SY46 172 aa9.77□□□□□ -0.85
SEC22C-202ENST00000273156 MP68P56378 58 aa9.75□□□□□ -0.85
SEC22C-202ENST00000273156 C9orf92A6NGG3 77 aa9.74□□□□□ -0.85
SEC22C-202ENST00000273156 TRAV22A0A0B4J277 110 aa9.72□□□□□ -0.85
SEC22C-202ENST00000273156 H0Y9P7 68 aa9.72□□□□□ -0.85
SEC22C-202ENST00000273156 KLKP1Q107X0 134 aa9.71□□□□□ -0.86
SEC22C-202ENST00000273156 H3BPC8 53 aa9.7□□□□□ -0.86
SEC22C-202ENST00000273156 SNURFQ9Y675 71 aa9.69□□□□□ -0.86
SEC22C-202ENST00000273156 SEC61BP60468 96 aaKnown RBP9.68□□□□□ -0.86
SEC22C-202ENST00000273156 LINC00208Q96KT6 92 aa9.66□□□□□ -0.86
SEC22C-202ENST00000273156 MUC17Q685J3 4493 aa9.65□□□□□ -0.87
SEC22C-202ENST00000273156 C20orf166-AS1Q96NR2 134 aa9.64□□□□□ -0.87
SEC22C-202ENST00000273156 A8MUU9 505 aa9.64□□□□□ -0.87
SEC22C-202ENST00000273156 Q5W150 140 aa9.64□□□□□ -0.87
SEC22C-202ENST00000273156 KRTAP3-3Q9BYR6 98 aa9.64□□□□□ -0.87
SEC22C-202ENST00000273156 KRTAP3-2Q9BYR7 98 aa9.64□□□□□ -0.87
SEC22C-202ENST00000273156 NDUFC1O43677 76 aa9.63□□□□□ -0.87
SEC22C-202ENST00000273156 C1orf64Q8NEQ6 169 aa9.63□□□□□ -0.87
SEC22C-202ENST00000273156 ZCCHC13Q8WW36 166 aaKnown RBP9.61□□□□□ -0.87
SEC22C-202ENST00000273156 CYSTM1Q9H1C7 97 aa9.61□□□□□ -0.87
SEC22C-202ENST00000273156 XP32Q5T750 250 aa9.6□□□□□ -0.87
SEC22C-202ENST00000273156 LCE2AQ5TA79 106 aaPredicted RBP9.58□□□□□ -0.88
SEC22C-202ENST00000273156 Q75L30 129 aa9.58□□□□□ -0.88
SEC22C-202ENST00000273156 LOC101927531A0A1B0GV80 90 aa9.56□□□□□ -0.88
SEC22C-202ENST00000273156 H7BZZ5 65 aa9.56□□□□□ -0.88
SEC22C-202ENST00000273156 FAT4Q6V0I7 4981 aa9.55□□□□□ -0.88
SEC22C-202ENST00000273156 TMEM258P61165 79 aa9.51□□□□□ -0.89
SEC22C-202ENST00000273156 RPL37P61927 97 aaKnown RBP9.49□□□□□ -0.89
SEC22C-202ENST00000273156 IGKV2-30P06310 120 aa9.49□□□□□ -0.89
SEC22C-202ENST00000273156 ATP11AUNQ6ZP68 121 aa9.48□□□□□ -0.89
SEC22C-202ENST00000273156 CYP4F30PQ9H0H9 118 aa9.48□□□□□ -0.89
SEC22C-202ENST00000273156 PCOTHQ58A44 107 aa9.45□□□□□ -0.9
SEC22C-202ENST00000273156 KRTAP4-1Q9BYQ7 146 aa9.45□□□□□ -0.9
SEC22C-202ENST00000273156 IGKV2D-30A0A075B6S6 120 aa9.44□□□□□ -0.9
SEC22C-202ENST00000273156 FAM236DA0A1B0GTK5 79 aa9.42□□□□□ -0.9
SEC22C-202ENST00000273156 FAM236CP0DP71 79 aa9.42□□□□□ -0.9
SEC22C-202ENST00000273156 C7orf65Q6ZTY9 151 aa9.42□□□□□ -0.9
SEC22C-202ENST00000273156 ATP5EP56381 51 aaPredicted RBP9.4□□□□□ -0.9
SEC22C-202ENST00000273156 SPANXA2-OT1Q8N9U9 137 aa9.39□□□□□ -0.91
SEC22C-202ENST00000273156 KRTAP9-2Q9BYQ4 174 aa9.38□□□□□ -0.91
SEC22C-202ENST00000273156 SPINK7P58062 85 aa9.34□□□□□ -0.91
SEC22C-202ENST00000273156 HRES1P13985 223 aa9.32□□□□□ -0.92
SEC22C-202ENST00000273156 LCE2CQ5TA81 110 aa9.24□□□□□ -0.93
SEC22C-202ENST00000273156 SERP1Q9Y6X1 66 aa9.22□□□□□ -0.93
SEC22C-202ENST00000273156 KRTAP19-2Q3LHN2 52 aa9.21□□□□□ -0.93
SEC22C-202ENST00000273156 RPS28P62857 69 aaKnown RBP9.2□□□□□ -0.94
SEC22C-202ENST00000273156 C4orf26Q17RF5 130 aa9.19□□□□□ -0.94
SEC22C-202ENST00000273156 DMAC1Q96GE9 116 aa9.17□□□□□ -0.94
SEC22C-202ENST00000273156 ACYP2P14621 99 aa9.16□□□□□ -0.94
SEC22C-202ENST00000273156 MT1HP80294 61 aa9.16□□□□□ -0.94
SEC22C-202ENST00000273156 COX6B2Q6YFQ2 88 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms