RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 IGLV8-61A0A075B6I0 122 aa5.32□□□□□ -1.56
VAPB-201ENST00000265619 H3BNG1 76 aa5.32□□□□□ -1.56
VAPB-201ENST00000265619 PRKDCP78527 4128 aaKnown RBP5.32□□□□□ -1.56
VAPB-201ENST00000265619 LY6G6CO95867 125 aa5.31□□□□□ -1.56
VAPB-201ENST00000265619 PLA2G2DQ9UNK4 145 aa5.31□□□□□ -1.56
VAPB-201ENST00000265619 A0A087X002 238 aa5.31□□□□□ -1.56
VAPB-201ENST00000265619 NOTCH2NLQ7Z3S9 236 aa5.31□□□□□ -1.56
VAPB-201ENST00000265619 DNAH10OSP0CZ25 163 aa5.3□□□□□ -1.56
VAPB-201ENST00000265619 TLX1NBP0CAT3 122 aa5.3□□□□□ -1.56
VAPB-201ENST00000265619 KRTAP16-1A8MUX0 517 aa5.29□□□□□ -1.56
VAPB-201ENST00000265619 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
VAPB-201ENST00000265619 CDK2AP2O75956 126 aa5.29□□□□□ -1.56
VAPB-201ENST00000265619 Q96NJ1 140 aa5.29□□□□□ -1.56
VAPB-201ENST00000265619 DNAH9Q9NYC9 4486 aa5.29□□□□□ -1.56
VAPB-201ENST00000265619 ASB16-AS1Q495Z4 193 aa5.28□□□□□ -1.56
VAPB-201ENST00000265619 APLNQ9ULZ1 77 aa5.27□□□□□ -1.57
VAPB-201ENST00000265619 CHTF8P0CG12 524 aa5.27□□□□□ -1.57
VAPB-201ENST00000265619 Q5W150 140 aa5.27□□□□□ -1.57
VAPB-201ENST00000265619 NUPR2A6NF83 97 aa5.26□□□□□ -1.57
VAPB-201ENST00000265619 IGLV9-49A0A0B4J1Y8 123 aa5.26□□□□□ -1.57
VAPB-201ENST00000265619 C8orf17Q9NRJ1 99 aa5.25□□□□□ -1.57
VAPB-201ENST00000265619 FRAS1Q86XX4 4008 aa5.25□□□□□ -1.57
VAPB-201ENST00000265619 SPATA8Q6RVD6 105 aa5.24□□□□□ -1.57
VAPB-201ENST00000265619 DNAH7Q8WXX0 4024 aa5.23□□□□□ -1.57
VAPB-201ENST00000265619 NBDYA0A0U1RRE5 68 aa5.22□□□□□ -1.57
VAPB-201ENST00000265619 SPINK6Q6UWN8 80 aa5.21□□□□□ -1.57
VAPB-201ENST00000265619 TP53AIP1Q9HCN2 124 aa5.21□□□□□ -1.57
VAPB-201ENST00000265619 A0A1B0GU69 56 aa5.21□□□□□ -1.58
VAPB-201ENST00000265619 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.58
VAPB-201ENST00000265619 ROMO1P60602 79 aa5.2□□□□□ -1.58
VAPB-201ENST00000265619 PLECQ15149 4684 aaKnown RBP5.2□□□□□ -1.58
VAPB-201ENST00000265619 STARD9Q9P2P6 4700 aa5.2□□□□□ -1.58
VAPB-201ENST00000265619 LCE2BO14633 110 aa5.19□□□□□ -1.58
VAPB-201ENST00000265619 ZNF861PO60384 105 aa5.19□□□□□ -1.58
VAPB-201ENST00000265619 KRTAP13-3Q3SY46 172 aa5.18□□□□□ -1.58
VAPB-201ENST00000265619 MRPL34Q9BQ48 92 aaKnown RBP5.17□□□□□ -1.58
VAPB-201ENST00000265619 DNAH8Q96JB1 4490 aa5.17□□□□□ -1.58
VAPB-201ENST00000265619 A0A1B0GVX0 72 aa5.17□□□□□ -1.58
VAPB-201ENST00000265619 FLG2Q5D862 2391 aaPredicted RBP5.17□□□□□ -1.58
VAPB-201ENST00000265619 SPRR1BP22528 89 aa5.16□□□□□ -1.58
VAPB-201ENST00000265619 K7ERS5 55 aa5.16□□□□□ -1.58
VAPB-201ENST00000265619 ACYP2P14621 99 aa5.15□□□□□ -1.58
VAPB-201ENST00000265619 ANAPC11Q9NYG5 84 aa5.14□□□□□ -1.59
VAPB-201ENST00000265619 LUZP6Q538Z0 58 aa5.14□□□□□ -1.59
VAPB-201ENST00000265619 PANO1I0J062 215 aa5.14□□□□□ -1.59
VAPB-201ENST00000265619 KMT2AQ03164 3969 aa5.13□□□□□ -1.59
VAPB-201ENST00000265619 UQCR11O14957 56 aa5.13□□□□□ -1.59
VAPB-201ENST00000265619 DMAC1Q96GE9 116 aa5.13□□□□□ -1.59
VAPB-201ENST00000265619 WWC2-AS2Q96NR7 200 aa5.13□□□□□ -1.59
VAPB-201ENST00000265619 DNAH17Q9UFH2 4485 aa5.12□□□□□ -1.59
VAPB-201ENST00000265619 C14orf177Q52M58 125 aa5.12□□□□□ -1.59
VAPB-201ENST00000265619 IGLV5-52A0A0A0MRZ9 124 aa5.11□□□□□ -1.59
VAPB-201ENST00000265619 P0C880 135 aa5.11□□□□□ -1.59
VAPB-201ENST00000265619 CRIPTQ9P021 101 aa5.11□□□□□ -1.59
VAPB-201ENST00000265619 A0A087WTM6 91 aa5.11□□□□□ -1.59
VAPB-201ENST00000265619 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.1□□□□□ -1.59
VAPB-201ENST00000265619 KRTAP21-3Q3LHN1 58 aa5.09□□□□□ -1.59
VAPB-201ENST00000265619 SPINK1P00995 79 aa5.07□□□□□ -1.6
VAPB-201ENST00000265619 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
VAPB-201ENST00000265619 Q6ZRN7 208 aaPredicted RBP5.07□□□□□ -1.6
VAPB-201ENST00000265619 DYNC2H1Q8NCM8 4307 aaKnown RBP5.07□□□□□ -1.6
VAPB-201ENST00000265619 KRTAP13-1Q8IUC0 172 aa5.06□□□□□ -1.6
VAPB-201ENST00000265619 KRTAP10-2P60368 255 aa5.05□□□□□ -1.6
VAPB-201ENST00000265619 LINC00304Q8N9R0 145 aa5.04□□□□□ -1.6
VAPB-201ENST00000265619 CIRBP-AS1Q8TBR5 109 aa5.04□□□□□ -1.6
VAPB-201ENST00000265619 A8MUU9 505 aa5.03□□□□□ -1.6
VAPB-201ENST00000265619 IGLV7-43P04211 117 aa5.02□□□□□ -1.61
VAPB-201ENST00000265619 H0YAA0 97 aa5.01□□□□□ -1.61
VAPB-201ENST00000265619 LCE2CQ5TA81 110 aa5.01□□□□□ -1.61
VAPB-201ENST00000265619 IGKV2D-30A0A075B6S6 120 aa5□□□□□ -1.61
VAPB-201ENST00000265619 NDUFAF8A1L188 74 aa5□□□□□ -1.61
VAPB-201ENST00000265619 IGKV2-30P06310 120 aa5□□□□□ -1.61
VAPB-201ENST00000265619 HYDINQ4G0P3 5121 aa4.99□□□□□ -1.61
VAPB-201ENST00000265619 VPS13DQ5THJ4 4388 aa4.99□□□□□ -1.61
VAPB-201ENST00000265619 DMBT1Q9UGM3 2413 aaPredicted RBP4.99□□□□□ -1.61
VAPB-201ENST00000265619 SMR3BP02814 79 aaPredicted RBP4.98□□□□□ -1.61
VAPB-201ENST00000265619 Q6ZSA8 131 aa4.98□□□□□ -1.61
VAPB-201ENST00000265619 SPACA4Q8TDM5 124 aa4.98□□□□□ -1.61
VAPB-201ENST00000265619 PSORS1C2Q9UIG4 136 aa4.98□□□□□ -1.61
VAPB-201ENST00000265619 HECTD4Q9Y4D8 3996 aa4.97□□□□□ -1.61
VAPB-201ENST00000265619 SPINT4Q6UDR6 99 aa4.97□□□□□ -1.61
VAPB-201ENST00000265619 C20orf166-AS1Q96NR2 134 aa4.97□□□□□ -1.61
VAPB-201ENST00000265619 LINC00483Q53H64 154 aa4.96□□□□□ -1.61
VAPB-201ENST00000265619 DNAH2Q9P225 4427 aa4.95□□□□□ -1.62
VAPB-201ENST00000265619 KRTAP10-1P60331 282 aa4.95□□□□□ -1.62
VAPB-201ENST00000265619 TYMSOSQ8TAI1 123 aa4.94□□□□□ -1.62
VAPB-201ENST00000265619 DNAH6Q9C0G6 4158 aa4.94□□□□□ -1.62
VAPB-201ENST00000265619 Q8N1X5 172 aa4.93□□□□□ -1.62
VAPB-201ENST00000265619 DNAH11Q96DT5 4516 aa4.92□□□□□ -1.62
VAPB-201ENST00000265619 SSBP3-AS1Q7Z2R9 100 aa4.88□□□□□ -1.63
VAPB-201ENST00000265619 PKHD1P08F94 4074 aa4.86□□□□□ -1.63
VAPB-201ENST00000265619 KMT2CQ8NEZ4 4911 aaKnown RBP4.86□□□□□ -1.63
VAPB-201ENST00000265619 TPRXLQ17RH7 258 aa4.83□□□□□ -1.64
VAPB-201ENST00000265619 A0A1B0GU33 70 aa4.82□□□□□ -1.64
VAPB-201ENST00000265619 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
VAPB-201ENST00000265619 SACSQ9NZJ4 4579 aa4.81□□□□□ -1.64
VAPB-201ENST00000265619 DNAH5Q8TE73 4624 aa4.8□□□□□ -1.64
VAPB-201ENST00000265619 H1FX-AS1Q4G0G2 97 aa4.79□□□□□ -1.64
VAPB-201ENST00000265619 LRP1BQ9NZR2 4599 aa4.78□□□□□ -1.64
VAPB-201ENST00000265619 LCE2AQ5TA79 106 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms