RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 SEC61BP60468 96 aaKnown RBP4.75□□□□□ -1.65
GTF3C3-201ENST00000263956 DNHD1Q96M86 4753 aa4.75□□□□□ -1.65
GTF3C3-201ENST00000263956 RBM12B-AS1Q9P1G2 102 aa4.73□□□□□ -1.65
GTF3C3-201ENST00000263956 ZCCHC13Q8WW36 166 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-201ENST00000263956 ACYP2P14621 99 aa4.7□□□□□ -1.66
GTF3C3-201ENST00000263956 ANK2Q01484 3957 aa4.69□□□□□ -1.66
GTF3C3-201ENST00000263956 COL7A1Q02388 2944 aa4.69□□□□□ -1.66
GTF3C3-201ENST00000263956 SERP1Q9Y6X1 66 aa4.69□□□□□ -1.66
GTF3C3-201ENST00000263956 KRTAP29-1A8MX34 341 aaPredicted RBP4.68□□□□□ -1.66
GTF3C3-201ENST00000263956 OCR1Q9BZK8 76 aa4.66□□□□□ -1.66
GTF3C3-201ENST00000263956 KRTAP10-8P60410 259 aa4.66□□□□□ -1.66
GTF3C3-201ENST00000263956 PRR15LQ9BU68 103 aa4.65□□□□□ -1.67
GTF3C3-201ENST00000263956 SPINK7P58062 85 aa4.63□□□□□ -1.67
GTF3C3-201ENST00000263956 ALMS1Q8TCU4 4167 aa4.63□□□□□ -1.67
GTF3C3-201ENST00000263956 NOTCH2NLQ7Z3S9 236 aa4.63□□□□□ -1.67
GTF3C3-201ENST00000263956 V9GYY9 64 aa4.63□□□□□ -1.67
GTF3C3-201ENST00000263956 KLKP1Q107X0 134 aa4.62□□□□□ -1.67
GTF3C3-201ENST00000263956 Q5W150 140 aa4.61□□□□□ -1.67
GTF3C3-201ENST00000263956 A0A0U1RQV1 116 aa4.6□□□□□ -1.67
GTF3C3-201ENST00000263956 Q75L30 129 aa4.6□□□□□ -1.67
GTF3C3-201ENST00000263956 MPLKIPQ8TAP9 179 aa4.6□□□□□ -1.67
GTF3C3-201ENST00000263956 C4orf26Q17RF5 130 aa4.59□□□□□ -1.67
GTF3C3-201ENST00000263956 RPL37P61927 97 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-201ENST00000263956 CYP4F30PQ9H0H9 118 aa4.58□□□□□ -1.68
GTF3C3-201ENST00000263956 Q8N9P0 234 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-201ENST00000263956 PRKDCP78527 4128 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-201ENST00000263956 HRES1P13985 223 aa4.57□□□□□ -1.68
GTF3C3-201ENST00000263956 SMIM26A0A096LP01 95 aa4.56□□□□□ -1.68
GTF3C3-201ENST00000263956 M0R2T5 61 aa4.56□□□□□ -1.68
GTF3C3-201ENST00000263956 A8MUN3 132 aa4.55□□□□□ -1.68
GTF3C3-201ENST00000263956 TPRXLQ17RH7 258 aa4.55□□□□□ -1.68
GTF3C3-201ENST00000263956 SPANXA2-OT1Q8N9U9 137 aa4.55□□□□□ -1.68
GTF3C3-201ENST00000263956 PLECQ15149 4684 aaKnown RBP4.55□□□□□ -1.68
GTF3C3-201ENST00000263956 A8MUU9 505 aa4.54□□□□□ -1.68
GTF3C3-201ENST00000263956 COA5Q86WW8 74 aa4.54□□□□□ -1.68
GTF3C3-201ENST00000263956 H7BZZ5 65 aa4.53□□□□□ -1.68
GTF3C3-201ENST00000263956 KRTAP10-4P60372 401 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-201ENST00000263956 C20orf166-AS1Q96NR2 134 aa4.53□□□□□ -1.68
GTF3C3-201ENST00000263956 DNAH3Q8TD57 4116 aa4.53□□□□□ -1.68
GTF3C3-201ENST00000263956 XP32Q5T750 250 aa4.52□□□□□ -1.69
GTF3C3-201ENST00000263956 K7ERS5 55 aa4.52□□□□□ -1.69
GTF3C3-201ENST00000263956 VPS13DQ5THJ4 4388 aa4.52□□□□□ -1.69
GTF3C3-201ENST00000263956 A0A1B0GU69 56 aa4.51□□□□□ -1.69
GTF3C3-201ENST00000263956 KRTAP13-3Q3SY46 172 aa4.5□□□□□ -1.69
GTF3C3-201ENST00000263956 SRRM2Q9UQ35 2752 aaKnown RBP4.5□□□□□ -1.69
GTF3C3-201ENST00000263956 KRTAP4-5Q9BYR2 181 aa4.49□□□□□ -1.69
GTF3C3-201ENST00000263956 STARD9Q9P2P6 4700 aa4.48□□□□□ -1.69
GTF3C3-201ENST00000263956 A6NED7 52 aa4.48□□□□□ -1.69
GTF3C3-201ENST00000263956 CSAG1Q6PB30 78 aa4.48□□□□□ -1.69
GTF3C3-201ENST00000263956 MT1HL1P0DM35 61 aa4.48□□□□□ -1.69
GTF3C3-201ENST00000263956 CMYA5Q8N3K9 4069 aa4.48□□□□□ -1.69
GTF3C3-201ENST00000263956 S4R3F8 94 aa4.47□□□□□ -1.69
GTF3C3-201ENST00000263956 DNAH1Q9P2D7 4330 aa4.45□□□□□ -1.7
GTF3C3-201ENST00000263956 PSPHP1O15172 72 aa4.44□□□□□ -1.7
GTF3C3-201ENST00000263956 RPS28P62857 69 aaKnown RBP4.43□□□□□ -1.7
GTF3C3-201ENST00000263956 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
GTF3C3-201ENST00000263956 DNAH11Q96DT5 4516 aa4.42□□□□□ -1.7
GTF3C3-201ENST00000263956 H1FX-AS1Q4G0G2 97 aa4.41□□□□□ -1.7
GTF3C3-201ENST00000263956 DMAC1Q96GE9 116 aa4.4□□□□□ -1.7
GTF3C3-201ENST00000263956 DNAH5Q8TE73 4624 aa4.4□□□□□ -1.7
GTF3C3-201ENST00000263956 BRK1Q8WUW1 75 aa4.4□□□□□ -1.71
GTF3C3-201ENST00000263956 DNAH10Q8IVF4 4471 aa4.37□□□□□ -1.71
GTF3C3-201ENST00000263956 DNAH17Q9UFH2 4485 aa4.37□□□□□ -1.71
GTF3C3-201ENST00000263956 DYNC1H1Q14204 4646 aaKnown RBP4.36□□□□□ -1.71
GTF3C3-201ENST00000263956 CYSTM1Q9H1C7 97 aa4.35□□□□□ -1.71
GTF3C3-201ENST00000263956 DYNC2H1Q8NCM8 4307 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-201ENST00000263956 UQCR11O14957 56 aa4.34□□□□□ -1.72
GTF3C3-201ENST00000263956 LINC01554Q52M75 96 aa4.32□□□□□ -1.72
GTF3C3-201ENST00000263956 LRP1BQ9NZR2 4599 aa4.3□□□□□ -1.72
GTF3C3-201ENST00000263956 RYR2Q92736 4967 aa4.3□□□□□ -1.72
GTF3C3-201ENST00000263956 SACSQ9NZJ4 4579 aa4.29□□□□□ -1.72
GTF3C3-201ENST00000263956 A0A1B0GU33 70 aa4.28□□□□□ -1.72
GTF3C3-201ENST00000263956 R4GN34 69 aa4.27□□□□□ -1.73
GTF3C3-201ENST00000263956 DNAH6Q9C0G6 4158 aa4.27□□□□□ -1.73
GTF3C3-201ENST00000263956 DNAH2Q9P225 4427 aa4.27□□□□□ -1.73
GTF3C3-201ENST00000263956 KMT2AQ03164 3969 aa4.27□□□□□ -1.73
GTF3C3-201ENST00000263956 CSMD3Q7Z407 3707 aa4.27□□□□□ -1.73
GTF3C3-201ENST00000263956 DNAH7Q8WXX0 4024 aa4.26□□□□□ -1.73
GTF3C3-201ENST00000263956 MIR22HGQ0VDD5 57 aa4.26□□□□□ -1.73
GTF3C3-201ENST00000263956 A0A0D9SG42 100 aa4.25□□□□□ -1.73
GTF3C3-201ENST00000263956 LINC01558Q9Y6Z2 57 aa4.25□□□□□ -1.73
GTF3C3-201ENST00000263956 ADM2Q7Z4H4 148 aa4.25□□□□□ -1.73
GTF3C3-201ENST00000263956 KIAA1109Q2LD37 5005 aa4.25□□□□□ -1.73
GTF3C3-201ENST00000263956 FAT2Q9NYQ8 4349 aa4.24□□□□□ -1.73
GTF3C3-201ENST00000263956 FAT1Q14517 4588 aa4.23□□□□□ -1.73
GTF3C3-201ENST00000263956 Q1T7F1 81 aa4.23□□□□□ -1.73
GTF3C3-201ENST00000263956 SPINT4Q6UDR6 99 aa4.23□□□□□ -1.73
GTF3C3-201ENST00000263956 RYR3Q15413 4870 aa4.22□□□□□ -1.73
GTF3C3-201ENST00000263956 M0QZ58 72 aa4.21□□□□□ -1.74
GTF3C3-201ENST00000263956 LCA10Q71F78 164 aa4.21□□□□□ -1.74
GTF3C3-201ENST00000263956 KRTAP17-1Q9BYP8 105 aa4.2□□□□□ -1.74
GTF3C3-201ENST00000263956 CAMK2N1Q7Z7J9 78 aa4.19□□□□□ -1.74
GTF3C3-201ENST00000263956 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
GTF3C3-201ENST00000263956 HYDINQ4G0P3 5121 aa4.18□□□□□ -1.74
GTF3C3-201ENST00000263956 RYR1P21817 5038 aa4.18□□□□□ -1.74
GTF3C3-201ENST00000263956 BIRC6Q9NR09 4857 aa4.17□□□□□ -1.74
GTF3C3-201ENST00000263956 KMT2CQ8NEZ4 4911 aaKnown RBP4.15□□□□□ -1.75
GTF3C3-201ENST00000263956 DNAH8Q96JB1 4490 aa4.13□□□□□ -1.75
GTF3C3-201ENST00000263956 PLAC4Q8WY50 150 aa4.12□□□□□ -1.75
GTF3C3-201ENST00000263956 CDC42SE1Q9NRR8 79 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms