RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 NDUFB1O75438 58 aa10.11□□□□□ -0.79
SRSF1-201ENST00000258962 CCDC179H3BU77 68 aa10.1□□□□□ -0.79
SRSF1-201ENST00000258962 TYMSOSQ8TAI1 123 aa10.1□□□□□ -0.79
SRSF1-201ENST00000258962 A8MWP4 228 aa10.08□□□□□ -0.8
SRSF1-201ENST00000258962 K7EQZ3 153 aa10.08□□□□□ -0.8
SRSF1-201ENST00000258962 HCG22E2RYF7 251 aa10.06□□□□□ -0.8
SRSF1-201ENST00000258962 TNXBP22105 4242 aa10.05□□□□□ -0.8
SRSF1-201ENST00000258962 PRR15Q8IV56 129 aa10.05□□□□□ -0.8
SRSF1-201ENST00000258962 ASB16-AS1Q495Z4 193 aa10.02□□□□□ -0.81
SRSF1-201ENST00000258962 Q5XG85 94 aa10.01□□□□□ -0.81
SRSF1-201ENST00000258962 C4orf48Q5BLP8 95 aa9.99□□□□□ -0.81
SRSF1-201ENST00000258962 LINC00304Q8N9R0 145 aa9.98□□□□□ -0.81
SRSF1-201ENST00000258962 LIMD2Q9BT23 127 aa9.97□□□□□ -0.81
SRSF1-201ENST00000258962 CASC2Q6XLA1 102 aa9.97□□□□□ -0.81
SRSF1-201ENST00000258962 OCR1Q9BZK8 76 aa9.97□□□□□ -0.81
SRSF1-201ENST00000258962 SPINK1P00995 79 aa9.96□□□□□ -0.82
SRSF1-201ENST00000258962 A0A1B0GVX0 72 aa9.93□□□□□ -0.82
SRSF1-201ENST00000258962 C1orf195Q5TG92 126 aa9.93□□□□□ -0.82
SRSF1-201ENST00000258962 SPAG11AQ6PDA7 123 aa9.93□□□□□ -0.82
SRSF1-201ENST00000258962 WFDC13Q8IUB5 93 aa9.92□□□□□ -0.82
SRSF1-201ENST00000258962 C20orf197Q8N268 126 aa9.92□□□□□ -0.82
SRSF1-201ENST00000258962 RPS29P62273 56 aaKnown RBP9.92□□□□□ -0.82
SRSF1-201ENST00000258962 C5orf47Q569G3 176 aa9.9□□□□□ -0.82
SRSF1-201ENST00000258962 HMCN2Q8NDA2 5059 aa9.9□□□□□ -0.83
SRSF1-201ENST00000258962 MMP24-AS1A0A0U1RRL7 71 aa9.89□□□□□ -0.83
SRSF1-201ENST00000258962 NDUFC1O43677 76 aa9.89□□□□□ -0.83
SRSF1-201ENST00000258962 KLKP1Q107X0 134 aa9.89□□□□□ -0.83
SRSF1-201ENST00000258962 hDV103S1A0JD37 113 aa9.88□□□□□ -0.83
SRSF1-201ENST00000258962 C8orf17Q9NRJ1 99 aa9.88□□□□□ -0.83
SRSF1-201ENST00000258962 IGHV6-1A0A0B4J1U7 121 aa9.87□□□□□ -0.83
SRSF1-201ENST00000258962 TMEM254Q8TBM7 123 aa9.87□□□□□ -0.83
SRSF1-201ENST00000258962 C8orf87E5RJ46 101 aa9.86□□□□□ -0.83
SRSF1-201ENST00000258962 TMEM258P61165 79 aa9.84□□□□□ -0.83
SRSF1-201ENST00000258962 NOTCH2NLQ7Z3S9 236 aa9.84□□□□□ -0.83
SRSF1-201ENST00000258962 TP53AIP1Q9HCN2 124 aa9.84□□□□□ -0.83
SRSF1-201ENST00000258962 MP68P56378 58 aa9.82□□□□□ -0.84
SRSF1-201ENST00000258962 PRR4Q16378 134 aa9.82□□□□□ -0.84
SRSF1-201ENST00000258962 A0A0U1RQV1 116 aa9.8□□□□□ -0.84
SRSF1-201ENST00000258962 H3BPC8 53 aa9.8□□□□□ -0.84
SRSF1-201ENST00000258962 MRPL34Q9BQ48 92 aaKnown RBP9.79□□□□□ -0.84
SRSF1-201ENST00000258962 SNURFQ9Y675 71 aa9.79□□□□□ -0.84
SRSF1-201ENST00000258962 LINC00313P59037 77 aa9.75□□□□□ -0.85
SRSF1-201ENST00000258962 H7BZZ5 65 aa9.73□□□□□ -0.85
SRSF1-201ENST00000258962 CYSTM1Q9H1C7 97 aa9.73□□□□□ -0.85
SRSF1-201ENST00000258962 NDUFS5O43920 106 aa9.72□□□□□ -0.85
SRSF1-201ENST00000258962 H0Y9P7 68 aa9.72□□□□□ -0.85
SRSF1-201ENST00000258962 ATP5EP56381 51 aaPredicted RBP9.72□□□□□ -0.85
SRSF1-201ENST00000258962 RETNLBQ9BQ08 111 aa9.72□□□□□ -0.85
SRSF1-201ENST00000258962 TRAV22A0A0B4J277 110 aa9.71□□□□□ -0.86
SRSF1-201ENST00000258962 KRTAP16-1A8MUX0 517 aa9.68□□□□□ -0.86
SRSF1-201ENST00000258962 FAM236DA0A1B0GTK5 79 aa9.67□□□□□ -0.86
SRSF1-201ENST00000258962 FAM236CP0DP71 79 aa9.67□□□□□ -0.86
SRSF1-201ENST00000258962 ZCCHC13Q8WW36 166 aaKnown RBP9.67□□□□□ -0.86
SRSF1-201ENST00000258962 LINC00208Q96KT6 92 aa9.66□□□□□ -0.86
SRSF1-201ENST00000258962 UBR4Q5T4S7 5183 aa9.66□□□□□ -0.86
SRSF1-201ENST00000258962 LRP2P98164 4655 aa9.65□□□□□ -0.86
SRSF1-201ENST00000258962 LCE2DQ5TA82 110 aaPredicted RBP9.65□□□□□ -0.86
SRSF1-201ENST00000258962 IGLV7-46A0A075B6I9 117 aa9.64□□□□□ -0.87
SRSF1-201ENST00000258962 RPS28P62857 69 aaKnown RBP9.63□□□□□ -0.87
SRSF1-201ENST00000258962 C1orf64Q8NEQ6 169 aa9.63□□□□□ -0.87
SRSF1-201ENST00000258962 FP248Q71RG6 208 aaPredicted RBP9.61□□□□□ -0.87
SRSF1-201ENST00000258962 Q8N9P0 234 aaPredicted RBP9.61□□□□□ -0.87
SRSF1-201ENST00000258962 LPAP08519 4548 aa9.56□□□□□ -0.88
SRSF1-201ENST00000258962 C9orf92A6NGG3 77 aa9.56□□□□□ -0.88
SRSF1-201ENST00000258962 TPRXLQ17RH7 258 aa9.56□□□□□ -0.88
SRSF1-201ENST00000258962 LOC101927531A0A1B0GV80 90 aa9.55□□□□□ -0.88
SRSF1-201ENST00000258962 SERP1Q9Y6X1 66 aa9.54□□□□□ -0.88
SRSF1-201ENST00000258962 KRTAP13-3Q3SY46 172 aa9.53□□□□□ -0.88
SRSF1-201ENST00000258962 Q5W150 140 aa9.53□□□□□ -0.88
SRSF1-201ENST00000258962 SPANXA2-OT1Q8N9U9 137 aa9.52□□□□□ -0.88
SRSF1-201ENST00000258962 C20orf166-AS1Q96NR2 134 aa9.46□□□□□ -0.89
SRSF1-201ENST00000258962 CYP4F30PQ9H0H9 118 aa9.46□□□□□ -0.89
SRSF1-201ENST00000258962 A8MUU9 505 aa9.45□□□□□ -0.9
SRSF1-201ENST00000258962 RNF213Q63HN8 5207 aa9.44□□□□□ -0.9
SRSF1-201ENST00000258962 PCOTHQ58A44 107 aa9.39□□□□□ -0.91
SRSF1-201ENST00000258962 IGKV2-30P06310 120 aa9.36□□□□□ -0.91
SRSF1-201ENST00000258962 Q75L30 129 aa9.36□□□□□ -0.91
SRSF1-201ENST00000258962 XP32Q5T750 250 aa9.34□□□□□ -0.91
SRSF1-201ENST00000258962 SMIM26A0A096LP01 95 aa9.33□□□□□ -0.92
SRSF1-201ENST00000258962 SEC61BP60468 96 aaKnown RBP9.3□□□□□ -0.92
SRSF1-201ENST00000258962 RPL37P61927 97 aaKnown RBP9.28□□□□□ -0.92
SRSF1-201ENST00000258962 IGKV2D-30A0A075B6S6 120 aa9.26□□□□□ -0.93
SRSF1-201ENST00000258962 C7orf65Q6ZTY9 151 aa9.26□□□□□ -0.93
SRSF1-201ENST00000258962 HRES1P13985 223 aa9.24□□□□□ -0.93
SRSF1-201ENST00000258962 MUC2Q02817 5179 aa9.22□□□□□ -0.93
SRSF1-201ENST00000258962 ACYP2P14621 99 aa9.21□□□□□ -0.93
SRSF1-201ENST00000258962 ATP11AUNQ6ZP68 121 aa9.2□□□□□ -0.94
SRSF1-201ENST00000258962 COA5Q86WW8 74 aa9.18□□□□□ -0.94
SRSF1-201ENST00000258962 MUC17Q685J3 4493 aa9.17□□□□□ -0.94
SRSF1-201ENST00000258962 DMAC1Q96GE9 116 aa9.15□□□□□ -0.94
SRSF1-201ENST00000258962 V9GYY9 64 aa9.15□□□□□ -0.95
SRSF1-201ENST00000258962 SPINK7P58062 85 aa9.14□□□□□ -0.95
SRSF1-201ENST00000258962 A8MUN3 132 aa9.1□□□□□ -0.95
SRSF1-201ENST00000258962 Q1T7F1 81 aa9.08□□□□□ -0.96
SRSF1-201ENST00000258962 KRTAP4-1Q9BYQ7 146 aa9.08□□□□□ -0.96
SRSF1-201ENST00000258962 CHKB-CPT1BH3BT56 60 aa9.07□□□□□ -0.96
SRSF1-201ENST00000258962 MPLKIPQ8TAP9 179 aa9.05□□□□□ -0.96
SRSF1-201ENST00000258962 C4orf26Q17RF5 130 aa9.03□□□□□ -0.96
SRSF1-201ENST00000258962 KRTAP3-3Q9BYR6 98 aa8.98□□□□□ -0.97
SRSF1-201ENST00000258962 KRTAP3-2Q9BYR7 98 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms