RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 VPS13BQ7Z7G8 4022 aa6.74□□□□□ -1.33
CLUHP3-201ENST00000254109 hDV103S1A0JD37 113 aa6.74□□□□□ -1.33
CLUHP3-201ENST00000254109 SSBP3-AS1Q7Z2R9 100 aa6.74□□□□□ -1.33
CLUHP3-201ENST00000254109 ZCCHC13Q8WW36 166 aaKnown RBP6.74□□□□□ -1.33
CLUHP3-201ENST00000254109 FAT1Q14517 4588 aa6.73□□□□□ -1.33
CLUHP3-201ENST00000254109 CD164Q04900 197 aa6.73□□□□□ -1.33
CLUHP3-201ENST00000254109 KRTAP10-4P60372 401 aaPredicted RBP6.72□□□□□ -1.33
CLUHP3-201ENST00000254109 A0A1B0GVX0 72 aa6.71□□□□□ -1.33
CLUHP3-201ENST00000254109 H3BPC8 53 aa6.71□□□□□ -1.33
CLUHP3-201ENST00000254109 C8orf17Q9NRJ1 99 aa6.71□□□□□ -1.33
CLUHP3-201ENST00000254109 H0Y9P7 68 aa6.71□□□□□ -1.34
CLUHP3-201ENST00000254109 IGHV6-1A0A0B4J1U7 121 aa6.7□□□□□ -1.34
CLUHP3-201ENST00000254109 FAM229AH3BQW9 127 aa6.7□□□□□ -1.34
CLUHP3-201ENST00000254109 Q5VSD8 79 aa6.7□□□□□ -1.34
CLUHP3-201ENST00000254109 LINC00208Q96KT6 92 aa6.7□□□□□ -1.34
CLUHP3-201ENST00000254109 C4orf48Q5BLP8 95 aa6.69□□□□□ -1.34
CLUHP3-201ENST00000254109 TP53AIP1Q9HCN2 124 aa6.69□□□□□ -1.34
CLUHP3-201ENST00000254109 PLA2G1BP04054 148 aaKnown RBP6.68□□□□□ -1.34
CLUHP3-201ENST00000254109 ASB16-AS1Q495Z4 193 aa6.68□□□□□ -1.34
CLUHP3-201ENST00000254109 FAM229BQ4G0N7 80 aa6.68□□□□□ -1.34
CLUHP3-201ENST00000254109 Q8N1X5 172 aa6.67□□□□□ -1.34
CLUHP3-201ENST00000254109 PRO0628Q9UI54 55 aa6.67□□□□□ -1.34
CLUHP3-201ENST00000254109 SMIM26A0A096LP01 95 aa6.66□□□□□ -1.34
CLUHP3-201ENST00000254109 TRAV22A0A0B4J277 110 aa6.66□□□□□ -1.34
CLUHP3-201ENST00000254109 SPINK6Q6UWN8 80 aa6.66□□□□□ -1.34
CLUHP3-201ENST00000254109 C1orf64Q8NEQ6 169 aa6.65□□□□□ -1.34
CLUHP3-201ENST00000254109 NDUFS5O43920 106 aa6.64□□□□□ -1.35
CLUHP3-201ENST00000254109 MRPL34Q9BQ48 92 aaKnown RBP6.64□□□□□ -1.35
CLUHP3-201ENST00000254109 A0A087X002 238 aa6.64□□□□□ -1.35
CLUHP3-201ENST00000254109 KRTAP4-5Q9BYR2 181 aa6.63□□□□□ -1.35
CLUHP3-201ENST00000254109 KRTAP13-2Q52LG2 175 aa6.62□□□□□ -1.35
CLUHP3-201ENST00000254109 Q5XG85 94 aa6.62□□□□□ -1.35
CLUHP3-201ENST00000254109 CYP4F30PQ9H0H9 118 aa6.61□□□□□ -1.35
CLUHP3-201ENST00000254109 C8orf87E5RJ46 101 aa6.6□□□□□ -1.35
CLUHP3-201ENST00000254109 NOTCH2NLQ7Z3S9 236 aa6.6□□□□□ -1.35
CLUHP3-201ENST00000254109 SPANXA2-OT1Q8N9U9 137 aa6.6□□□□□ -1.35
CLUHP3-201ENST00000254109 HERC2O95714 4834 aa6.59□□□□□ -1.35
CLUHP3-201ENST00000254109 KRTAP1-4P0C5Y4 121 aa6.59□□□□□ -1.35
CLUHP3-201ENST00000254109 C4orf26Q17RF5 130 aa6.59□□□□□ -1.35
CLUHP3-201ENST00000254109 PRR4Q16378 134 aa6.58□□□□□ -1.36
CLUHP3-201ENST00000254109 LIMD2Q9BT23 127 aa6.58□□□□□ -1.36
CLUHP3-201ENST00000254109 FP248Q71RG6 208 aaPredicted RBP6.57□□□□□ -1.36
CLUHP3-201ENST00000254109 C1orf195Q5TG92 126 aa6.55□□□□□ -1.36
CLUHP3-201ENST00000254109 TYMSOSQ8TAI1 123 aa6.55□□□□□ -1.36
CLUHP3-201ENST00000254109 PKHD1L1Q86WI1 4243 aa6.55□□□□□ -1.36
CLUHP3-201ENST00000254109 FLG2Q5D862 2391 aaPredicted RBP6.55□□□□□ -1.36
CLUHP3-201ENST00000254109 LINC00313P59037 77 aa6.55□□□□□ -1.36
CLUHP3-201ENST00000254109 PRR26Q8N8Z3 221 aa6.53□□□□□ -1.36
CLUHP3-201ENST00000254109 ABCA13Q86UQ4 5058 aa6.52□□□□□ -1.37
CLUHP3-201ENST00000254109 SPINK1P00995 79 aa6.52□□□□□ -1.37
CLUHP3-201ENST00000254109 MPLKIPQ8TAP9 179 aa6.52□□□□□ -1.37
CLUHP3-201ENST00000254109 IGLV7-46A0A075B6I9 117 aa6.51□□□□□ -1.37
CLUHP3-201ENST00000254109 PCOTHQ58A44 107 aa6.51□□□□□ -1.37
CLUHP3-201ENST00000254109 LOC101927531A0A1B0GV80 90 aa6.5□□□□□ -1.37
CLUHP3-201ENST00000254109 LRP1Q07954 4544 aaKnown RBP6.5□□□□□ -1.37
CLUHP3-201ENST00000254109 Q5W150 140 aa6.47□□□□□ -1.37
CLUHP3-201ENST00000254109 SPAG11AQ6PDA7 123 aa6.47□□□□□ -1.37
CLUHP3-201ENST00000254109 Q8N9P0 234 aaPredicted RBP6.46□□□□□ -1.37
CLUHP3-201ENST00000254109 LINC00304Q8N9R0 145 aa6.46□□□□□ -1.37
CLUHP3-201ENST00000254109 MYCBP2O75592 4640 aa6.46□□□□□ -1.38
CLUHP3-201ENST00000254109 RPS29P62273 56 aaKnown RBP6.45□□□□□ -1.38
CLUHP3-201ENST00000254109 Q1T7F1 81 aa6.45□□□□□ -1.38
CLUHP3-201ENST00000254109 KRTAP13-3Q3SY46 172 aa6.45□□□□□ -1.38
CLUHP3-201ENST00000254109 FAT3Q8TDW7 4589 aa6.44□□□□□ -1.38
CLUHP3-201ENST00000254109 KRTAP10-8P60410 259 aa6.43□□□□□ -1.38
CLUHP3-201ENST00000254109 MT1HL1P0DM35 61 aa6.42□□□□□ -1.38
CLUHP3-201ENST00000254109 COA5Q86WW8 74 aa6.42□□□□□ -1.38
CLUHP3-201ENST00000254109 KRTAP16-1A8MUX0 517 aa6.41□□□□□ -1.38
CLUHP3-201ENST00000254109 PCLOQ9Y6V0 5065 aa6.4□□□□□ -1.38
CLUHP3-201ENST00000254109 RETNLBQ9BQ08 111 aa6.39□□□□□ -1.39
CLUHP3-201ENST00000254109 TNXBP22105 4242 aa6.38□□□□□ -1.39
CLUHP3-201ENST00000254109 IGKV2-30P06310 120 aa6.36□□□□□ -1.39
CLUHP3-201ENST00000254109 DMBT1Q9UGM3 2413 aaPredicted RBP6.35□□□□□ -1.39
CLUHP3-201ENST00000254109 HRES1P13985 223 aa6.34□□□□□ -1.39
CLUHP3-201ENST00000254109 PSPHP1O15172 72 aa6.34□□□□□ -1.4
CLUHP3-201ENST00000254109 PMAIP1Q13794 54 aa6.34□□□□□ -1.4
CLUHP3-201ENST00000254109 J3QL48 77 aa6.33□□□□□ -1.4
CLUHP3-201ENST00000254109 ACYP2P14621 99 aa6.33□□□□□ -1.4
CLUHP3-201ENST00000254109 BRK1Q8WUW1 75 aa6.32□□□□□ -1.4
CLUHP3-201ENST00000254109 IGKV2D-30A0A075B6S6 120 aa6.3□□□□□ -1.4
CLUHP3-201ENST00000254109 A8MUN3 132 aa6.29□□□□□ -1.4
CLUHP3-201ENST00000254109 DMAC1Q96GE9 116 aa6.29□□□□□ -1.4
CLUHP3-201ENST00000254109 H3BS24 57 aa6.29□□□□□ -1.4
CLUHP3-201ENST00000254109 PRR15LQ9BU68 103 aa6.28□□□□□ -1.4
CLUHP3-201ENST00000254109 CHKB-CPT1BH3BT56 60 aa6.26□□□□□ -1.41
CLUHP3-201ENST00000254109 Q5VV11 94 aa6.25□□□□□ -1.41
CLUHP3-201ENST00000254109 C9orf92A6NGG3 77 aa6.25□□□□□ -1.41
CLUHP3-201ENST00000254109 LINC01558Q9Y6Z2 57 aa6.25□□□□□ -1.41
CLUHP3-201ENST00000254109 C7orf65Q6ZTY9 151 aa6.24□□□□□ -1.41
CLUHP3-201ENST00000254109 C20orf166-AS1Q96NR2 134 aa6.22□□□□□ -1.41
CLUHP3-201ENST00000254109 A8MUU9 505 aa6.22□□□□□ -1.41
CLUHP3-201ENST00000254109 Q75L30 129 aa6.21□□□□□ -1.42
CLUHP3-201ENST00000254109 A6NED7 52 aa6.16□□□□□ -1.42
CLUHP3-201ENST00000254109 HERC1Q15751 4861 aa6.16□□□□□ -1.42
CLUHP3-201ENST00000254109 A0A1B0GU69 56 aa6.09□□□□□ -1.43
CLUHP3-201ENST00000254109 SPINK7P58062 85 aa6.09□□□□□ -1.43
CLUHP3-201ENST00000254109 RBM12B-AS1Q9P1G2 102 aa6.09□□□□□ -1.43
CLUHP3-201ENST00000254109 LCE2DQ5TA82 110 aaPredicted RBP6.07□□□□□ -1.44
CLUHP3-201ENST00000254109 CDC42SE1Q9NRR8 79 aa6.06□□□□□ -1.44
CLUHP3-201ENST00000254109 ATP11AUNQ6ZP68 121 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms