RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 LINC00304Q8N9R0 145 aa2.64□□□□□ -1.99
UBE4A-201ENST00000252108 SACSQ9NZJ4 4579 aa2.64□□□□□ -1.99
UBE4A-201ENST00000252108 MEGF8Q7Z7M0 2845 aa2.64□□□□□ -1.99
UBE4A-201ENST00000252108 IGLV7-46A0A075B6I9 117 aa2.64□□□□□ -1.99
UBE4A-201ENST00000252108 Q96NJ1 140 aa2.64□□□□□ -1.99
UBE4A-201ENST00000252108 PKHD1P08F94 4074 aa2.63□□□□□ -1.99
UBE4A-201ENST00000252108 CDC42SE1Q9NRR8 79 aa2.63□□□□□ -1.99
UBE4A-201ENST00000252108 PKHD1L1Q86WI1 4243 aa2.63□□□□□ -1.99
UBE4A-201ENST00000252108 C9orf92A6NGG3 77 aa2.63□□□□□ -1.99
UBE4A-201ENST00000252108 FAM229BQ4G0N7 80 aa2.62□□□□□ -1.99
UBE4A-201ENST00000252108 LINC01554Q52M75 96 aa2.62□□□□□ -1.99
UBE4A-201ENST00000252108 CHTF8P0CG12 524 aa2.62□□□□□ -1.99
UBE4A-201ENST00000252108 MRPL34Q9BQ48 92 aaKnown RBP2.62□□□□□ -1.99
UBE4A-201ENST00000252108 LINC01558Q9Y6Z2 57 aa2.61□□□□□ -1.99
UBE4A-201ENST00000252108 TENM2Q9NT68 2774 aa2.61□□□□□ -1.99
UBE4A-201ENST00000252108 C8orf17Q9NRJ1 99 aa2.61□□□□□ -1.99
UBE4A-201ENST00000252108 Q8N9P0 234 aaPredicted RBP2.61□□□□□ -1.99
UBE4A-201ENST00000252108 SPAG11AQ6PDA7 123 aa2.61□□□□□ -1.99
UBE4A-201ENST00000252108 A0A1B0GVX0 72 aa2.6□□□□□ -1.99
UBE4A-201ENST00000252108 ASB16-AS1Q495Z4 193 aa2.6□□□□□ -1.99
UBE4A-201ENST00000252108 C9orf163Q8N9P6 203 aa2.6□□□□□ -1.99
UBE4A-201ENST00000252108 FAM168BA1KXE4 195 aa2.6□□□□□ -1.99
UBE4A-201ENST00000252108 KRTAP29-1A8MX34 341 aaPredicted RBP2.6□□□□□ -1.99
UBE4A-201ENST00000252108 PCOTHQ58A44 107 aa2.6□□□□□ -1.99
UBE4A-201ENST00000252108 CASC10Q5T4H9 136 aa2.6□□□□□ -1.99
UBE4A-201ENST00000252108 STAB1Q9NY15 2570 aa2.6□□□□□ -1.99
UBE4A-201ENST00000252108 DEFB116Q30KQ4 102 aa2.6□□□□□ -1.99
UBE4A-201ENST00000252108 LINC00472Q9H8W2 130 aa2.59□□□□□ -1.99
UBE4A-201ENST00000252108 LRP1BQ9NZR2 4599 aa2.59□□□□□ -1.99
UBE4A-201ENST00000252108 Q5VV11 94 aa2.59□□□□□ -1.99
UBE4A-201ENST00000252108 LCA10Q71F78 164 aa2.59□□□□□ -1.99
UBE4A-201ENST00000252108 SRRM2Q9UQ35 2752 aaKnown RBP2.59□□□□□ -2
UBE4A-201ENST00000252108 K7EIL1 84 aa2.58□□□□□ -2
UBE4A-201ENST00000252108 MMP24-AS1A0A0U1RRL7 71 aa2.58□□□□□ -2
UBE4A-201ENST00000252108 PSORS1C2Q9UIG4 136 aa2.58□□□□□ -2
UBE4A-201ENST00000252108 PHF5AQ7RTV0 110 aaKnown RBP2.58□□□□□ -2
UBE4A-201ENST00000252108 SSBP3-AS1Q7Z2R9 100 aa2.58□□□□□ -2
UBE4A-201ENST00000252108 KRTAP1-5Q9BYS1 174 aa2.58□□□□□ -2
UBE4A-201ENST00000252108 A0A087X002 238 aa2.57□□□□□ -2
UBE4A-201ENST00000252108 A0A1B0GU69 56 aa2.57□□□□□ -2
UBE4A-201ENST00000252108 SEC61BP60468 96 aaKnown RBP2.57□□□□□ -2
UBE4A-201ENST00000252108 VPS13BQ7Z7G8 4022 aa2.57□□□□□ -2
UBE4A-201ENST00000252108 LINC00313P59037 77 aa2.57□□□□□ -2
UBE4A-201ENST00000252108 PLAC4Q8WY50 150 aa2.57□□□□□ -2
UBE4A-201ENST00000252108 Q6ZR54 194 aa2.57□□□□□ -2
UBE4A-201ENST00000252108 Q6ZRN7 208 aaPredicted RBP2.57□□□□□ -2
UBE4A-201ENST00000252108 APOBP04114 4563 aaKnown RBP2.57□□□□□ -2
UBE4A-201ENST00000252108 KRTAP13-1Q8IUC0 172 aa2.57□□□□□ -2
UBE4A-201ENST00000252108 CAMK2N1Q7Z7J9 78 aa2.56□□□□□ -2
UBE4A-201ENST00000252108 APLNQ9ULZ1 77 aa2.56□□□□□ -2
UBE4A-201ENST00000252108 STAB2Q8WWQ8 2551 aa2.56□□□□□ -2
UBE4A-201ENST00000252108 A0A1W2PNN7 141 aa2.56□□□□□ -2
UBE4A-201ENST00000252108 UQCR11O14957 56 aa2.55□□□□□ -2
UBE4A-201ENST00000252108 KRTAP11-1Q8IUC1 163 aa2.55□□□□□ -2
UBE4A-201ENST00000252108 ZNF861PO60384 105 aa2.55□□□□□ -2
UBE4A-201ENST00000252108 LINC00483Q53H64 154 aa2.54□□□□□ -2
UBE4A-201ENST00000252108 HRES1P13985 223 aa2.54□□□□□ -2
UBE4A-201ENST00000252108 RYR2Q92736 4967 aa2.53□□□□□ -2
UBE4A-201ENST00000252108 NOTCH1P46531 2555 aa2.52□□□□□ -2.01
UBE4A-201ENST00000252108 A0A087WTM6 91 aa2.52□□□□□ -2.01
UBE4A-201ENST00000252108 MIR22HGQ0VDD5 57 aa2.52□□□□□ -2.01
UBE4A-201ENST00000252108 PRR26Q8N8Z3 221 aa2.51□□□□□ -2.01
UBE4A-201ENST00000252108 HSPG2P98160 4391 aa2.51□□□□□ -2.01
UBE4A-201ENST00000252108 A6NN06 94 aa2.51□□□□□ -2.01
UBE4A-201ENST00000252108 F8P00451 2351 aa2.51□□□□□ -2.01
UBE4A-201ENST00000252108 DMAC1Q96GE9 116 aa2.5□□□□□ -2.01
UBE4A-201ENST00000252108 A0A0G2JQZ4 141 aa2.5□□□□□ -2.01
UBE4A-201ENST00000252108 DYNC1H1Q14204 4646 aaKnown RBP2.5□□□□□ -2.01
UBE4A-201ENST00000252108 FAT3Q8TDW7 4589 aa2.5□□□□□ -2.01
UBE4A-201ENST00000252108 TNXBP22105 4242 aa2.5□□□□□ -2.01
UBE4A-201ENST00000252108 SPINT4Q6UDR6 99 aa2.5□□□□□ -2.01
UBE4A-201ENST00000252108 PLAC8Q9NZF1 115 aa2.49□□□□□ -2.01
UBE4A-201ENST00000252108 IGLV7-43P04211 117 aa2.49□□□□□ -2.01
UBE4A-201ENST00000252108 COL6A5A8TX70 2615 aa2.49□□□□□ -2.01
UBE4A-201ENST00000252108 A0A0A0MQY5 61 aa2.49□□□□□ -2.01
UBE4A-201ENST00000252108 PANO1I0J062 215 aa2.49□□□□□ -2.01
UBE4A-201ENST00000252108 PRAC1Q96KF2 57 aa2.48□□□□□ -2.01
UBE4A-201ENST00000252108 SPATA8Q6RVD6 105 aa2.47□□□□□ -2.01
UBE4A-201ENST00000252108 CRIPTQ9P021 101 aa2.47□□□□□ -2.01
UBE4A-201ENST00000252108 SPINK7P58062 85 aa2.46□□□□□ -2.02
UBE4A-201ENST00000252108 KRTAP13-3Q3SY46 172 aa2.46□□□□□ -2.02
UBE4A-201ENST00000252108 Q5W150 140 aa2.45□□□□□ -2.02
UBE4A-201ENST00000252108 KMT2CQ8NEZ4 4911 aaKnown RBP2.44□□□□□ -2.02
UBE4A-201ENST00000252108 A0A0D9SG42 100 aa2.44□□□□□ -2.02
UBE4A-201ENST00000252108 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.44□□□□□ -2.02
UBE4A-201ENST00000252108 TGP01266 2768 aa2.44□□□□□ -2.02
UBE4A-201ENST00000252108 FAT1Q14517 4588 aa2.42□□□□□ -2.02
UBE4A-201ENST00000252108 MGAM2Q2M2H8 2515 aa2.42□□□□□ -2.02
UBE4A-201ENST00000252108 RYR3Q15413 4870 aa2.42□□□□□ -2.02
UBE4A-201ENST00000252108 CSAG1Q6PB30 78 aa2.42□□□□□ -2.02
UBE4A-201ENST00000252108 RPS29P62273 56 aaKnown RBP2.41□□□□□ -2.02
UBE4A-201ENST00000252108 A8MU10 97 aa2.4□□□□□ -2.03
UBE4A-201ENST00000252108 ANAPC11Q9NYG5 84 aa2.4□□□□□ -2.03
UBE4A-201ENST00000252108 KRTAP10-4P60372 401 aaPredicted RBP2.39□□□□□ -2.03
UBE4A-201ENST00000252108 LUZP6Q538Z0 58 aa2.39□□□□□ -2.03
UBE4A-201ENST00000252108 A0A1B0GU33 70 aa2.39□□□□□ -2.03
UBE4A-201ENST00000252108 S4R3F8 94 aa2.39□□□□□ -2.03
UBE4A-201ENST00000252108 KRTAP21-3Q3LHN1 58 aa2.38□□□□□ -2.03
UBE4A-201ENST00000252108 R4GN34 69 aa2.38□□□□□ -2.03
UBE4A-201ENST00000252108 LRP1Q07954 4544 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms