RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 A0A1B0GV72 72 aa6.25□□□□□ -1.41
SF3B6-201ENST00000233468 A0A1W2PPM0 123 aa6.25□□□□□ -1.41
SF3B6-201ENST00000233468 C9JAW5 83 aa6.24□□□□□ -1.41
SF3B6-201ENST00000233468 CCKP06307 115 aa6.24□□□□□ -1.41
SF3B6-201ENST00000233468 A0A1W2PNM2 257 aa6.23□□□□□ -1.41
SF3B6-201ENST00000233468 PDE6GP18545 87 aa6.23□□□□□ -1.41
SF3B6-201ENST00000233468 SEC61BP60468 96 aaKnown RBP6.23□□□□□ -1.41
SF3B6-201ENST00000233468 MUC17Q685J3 4493 aa6.22□□□□□ -1.41
SF3B6-201ENST00000233468 VPS25Q9BRG1 176 aa6.21□□□□□ -1.42
SF3B6-201ENST00000233468 A0A1B0GW54 56 aa6.2□□□□□ -1.42
SF3B6-201ENST00000233468 C9orf92A6NGG3 77 aa6.2□□□□□ -1.42
SF3B6-201ENST00000233468 H3BT86 120 aa6.2□□□□□ -1.42
SF3B6-201ENST00000233468 PCP4L1A6NKN8 68 aa6.19□□□□□ -1.42
SF3B6-201ENST00000233468 SPCS1Q9Y6A9 102 aa6.19□□□□□ -1.42
SF3B6-201ENST00000233468 LOC110117498A0A087WWA1 95 aa6.18□□□□□ -1.42
SF3B6-201ENST00000233468 Q6ZQT0 140 aa6.15□□□□□ -1.42
SF3B6-201ENST00000233468 OBSCN-AS1Q96MR7 158 aa6.15□□□□□ -1.42
SF3B6-201ENST00000233468 SIGMAR1Q99720 223 aa6.15□□□□□ -1.42
SF3B6-201ENST00000233468 IGKV4-1P06312 121 aa6.14□□□□□ -1.43
SF3B6-201ENST00000233468 C14orf132Q9NPU4 83 aa6.14□□□□□ -1.43
SF3B6-201ENST00000233468 J3KT08 172 aa6.13□□□□□ -1.43
SF3B6-201ENST00000233468 GTF2H5Q6ZYL4 71 aa6.13□□□□□ -1.43
SF3B6-201ENST00000233468 Q96NJ1 140 aa6.13□□□□□ -1.43
SF3B6-201ENST00000233468 K7EP34 96 aa6.12□□□□□ -1.43
SF3B6-201ENST00000233468 LINC00472Q9H8W2 130 aa6.12□□□□□ -1.43
SF3B6-201ENST00000233468 RPL37P61927 97 aaKnown RBP6.1□□□□□ -1.43
SF3B6-201ENST00000233468 MTURNQ8N3F0 131 aa6.1□□□□□ -1.43
SF3B6-201ENST00000233468 KRTAP5-3Q6L8H2 238 aa6.09□□□□□ -1.43
SF3B6-201ENST00000233468 KRTAP4-1Q9BYQ7 146 aa6.09□□□□□ -1.43
SF3B6-201ENST00000233468 NDUFB1O75438 58 aa6.08□□□□□ -1.44
SF3B6-201ENST00000233468 LINC00313P59037 77 aa6.08□□□□□ -1.44
SF3B6-201ENST00000233468 PCOTHQ58A44 107 aa6.08□□□□□ -1.44
SF3B6-201ENST00000233468 Q75L30 129 aa6.08□□□□□ -1.44
SF3B6-201ENST00000233468 NREPQ16612 68 aa6.07□□□□□ -1.44
SF3B6-201ENST00000233468 DEFB116Q30KQ4 102 aa6.07□□□□□ -1.44
SF3B6-201ENST00000233468 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
SF3B6-201ENST00000233468 ATP11AUNQ6ZP68 121 aa6.07□□□□□ -1.44
SF3B6-201ENST00000233468 C8orf87E5RJ46 101 aa6.06□□□□□ -1.44
SF3B6-201ENST00000233468 IGHV6-1A0A0B4J1U7 121 aa6.05□□□□□ -1.44
SF3B6-201ENST00000233468 F8W1H4 67 aa6.05□□□□□ -1.44
SF3B6-201ENST00000233468 DSCR10P59022 87 aa6.05□□□□□ -1.44
SF3B6-201ENST00000233468 A0A1B0GVX0 72 aa6.04□□□□□ -1.44
SF3B6-201ENST00000233468 C20orf166-AS1Q96NR2 134 aa6.03□□□□□ -1.44
SF3B6-201ENST00000233468 PRO0461Q9UI25 63 aa6.03□□□□□ -1.44
SF3B6-201ENST00000233468 A8MWP4 228 aa6.02□□□□□ -1.45
SF3B6-201ENST00000233468 A8MUU9 505 aa6.01□□□□□ -1.45
SF3B6-201ENST00000233468 FSIP2Q5CZC0 6907 aa5.97□□□□□ -1.45
SF3B6-201ENST00000233468 BPY2O14599 106 aa5.97□□□□□ -1.45
SF3B6-201ENST00000233468 UBL5Q9BZL1 73 aa5.97□□□□□ -1.45
SF3B6-201ENST00000233468 KRTAP16-1A8MUX0 517 aa5.96□□□□□ -1.46
SF3B6-201ENST00000233468 NOTCH2NLQ7Z3S9 236 aa5.96□□□□□ -1.46
SF3B6-201ENST00000233468 PRR15Q8IV56 129 aa5.96□□□□□ -1.46
SF3B6-201ENST00000233468 IGKV3D-7A0A0C4DH55 119 aa5.95□□□□□ -1.46
SF3B6-201ENST00000233468 ETDBQ3ZM63 59 aa5.95□□□□□ -1.46
SF3B6-201ENST00000233468 Q6ZVQ6 151 aa5.95□□□□□ -1.46
SF3B6-201ENST00000233468 C8orf17Q9NRJ1 99 aa5.95□□□□□ -1.46
SF3B6-201ENST00000233468 CRCT1Q9UGL9 99 aa5.95□□□□□ -1.46
SF3B6-201ENST00000233468 KRTAP19-2Q3LHN2 52 aa5.91□□□□□ -1.46
SF3B6-201ENST00000233468 LINC00846Q9NV44 126 aa5.91□□□□□ -1.46
SF3B6-201ENST00000233468 Q8N9P0 234 aaPredicted RBP5.9□□□□□ -1.46
SF3B6-201ENST00000233468 K7EQZ3 153 aa5.89□□□□□ -1.47
SF3B6-201ENST00000233468 ACYP1P07311 99 aa5.89□□□□□ -1.47
SF3B6-201ENST00000233468 TMEM254Q8TBM7 123 aa5.89□□□□□ -1.47
SF3B6-201ENST00000233468 hDV103S1A0JD37 113 aa5.88□□□□□ -1.47
SF3B6-201ENST00000233468 COX6B2Q6YFQ2 88 aa5.88□□□□□ -1.47
SF3B6-201ENST00000233468 MRPL34Q9BQ48 92 aaKnown RBP5.88□□□□□ -1.47
SF3B6-201ENST00000233468 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
SF3B6-201ENST00000233468 MT1HP80294 61 aa5.87□□□□□ -1.47
SF3B6-201ENST00000233468 ZCCHC13Q8WW36 166 aaKnown RBP5.87□□□□□ -1.47
SF3B6-201ENST00000233468 MMP24-AS1A0A0U1RRL7 71 aa5.86□□□□□ -1.47
SF3B6-201ENST00000233468 A0A1B0GV90 55 aa5.84□□□□□ -1.47
SF3B6-201ENST00000233468 FAM240AA0A1B0GVK7 77 aa5.84□□□□□ -1.47
SF3B6-201ENST00000233468 NDUFS5O43920 106 aa5.84□□□□□ -1.47
SF3B6-201ENST00000233468 CXCL6P80162 114 aa5.84□□□□□ -1.47
SF3B6-201ENST00000233468 CASC2Q6XLA1 102 aa5.83□□□□□ -1.48
SF3B6-201ENST00000233468 Q8N9L7 120 aa5.82□□□□□ -1.48
SF3B6-201ENST00000233468 WFDC13Q8IUB5 93 aa5.81□□□□□ -1.48
SF3B6-201ENST00000233468 RBM12B-AS1Q9P1G2 102 aa5.81□□□□□ -1.48
SF3B6-201ENST00000233468 HCG22E2RYF7 251 aa5.8□□□□□ -1.48
SF3B6-201ENST00000233468 J3QR89 54 aa5.78□□□□□ -1.48
SF3B6-201ENST00000233468 KRTAP10-6P60371 365 aaPredicted RBP5.78□□□□□ -1.48
SF3B6-201ENST00000233468 ATP5EP2Q5VTU8 51 aa5.78□□□□□ -1.48
SF3B6-201ENST00000233468 FAM236DA0A1B0GTK5 79 aa5.77□□□□□ -1.49
SF3B6-201ENST00000233468 FAM236CP0DP71 79 aa5.77□□□□□ -1.49
SF3B6-201ENST00000233468 SPINK7P58062 85 aa5.77□□□□□ -1.49
SF3B6-201ENST00000233468 M0R2T5 61 aa5.75□□□□□ -1.49
SF3B6-201ENST00000233468 FLGP20930 4061 aaPredicted RBP5.73□□□□□ -1.49
SF3B6-201ENST00000233468 HRES1P13985 223 aa5.73□□□□□ -1.49
SF3B6-201ENST00000233468 TP53AIP1Q9HCN2 124 aa5.73□□□□□ -1.49
SF3B6-201ENST00000233468 LINC00643Q86TS7 51 aa5.72□□□□□ -1.49
SF3B6-201ENST00000233468 MPLKIPQ8TAP9 179 aa5.71□□□□□ -1.5
SF3B6-201ENST00000233468 HIST1H4AP62805 103 aaKnown RBP5.7□□□□□ -1.5
SF3B6-201ENST00000233468 C7orf65Q6ZTY9 151 aa5.7□□□□□ -1.5
SF3B6-201ENST00000233468 IGKV2D-30A0A075B6S6 120 aa5.68□□□□□ -1.5
SF3B6-201ENST00000233468 IGKV2-30P06310 120 aa5.68□□□□□ -1.5
SF3B6-201ENST00000233468 Q5W150 140 aa5.67□□□□□ -1.5
SF3B6-201ENST00000233468 K7ERU9 68 aa5.6□□□□□ -1.51
SF3B6-201ENST00000233468 UQCRQO14949 82 aa5.59□□□□□ -1.51
SF3B6-201ENST00000233468 TRAV22A0A0B4J277 110 aa5.58□□□□□ -1.52
SF3B6-201ENST00000233468 ATOX1O00244 68 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms