RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Defb47Q30KN1 79 aa13.29□□□□□ -0.28
Col17a1-202ENSMUST00000086923 B230104I21RikQ3USW4 141 aa13.29□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Ifitm2Q99J93 144 aa13.29□□□□□ -0.28
Col17a1-202ENSMUST00000086923 LeprotO89013 131 aa13.29□□□□□ -0.28
Col17a1-202ENSMUST00000086923 PtprdQ64487 1912 aa13.29□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Spink8Q09TK9 105 aa13.28□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Med12A2AGH6 2190 aa13.28□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Olfr312Q7TRZ9 308 aa13.28□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Ighv3-8A0A075B5T0 131 aa13.28□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Ighv8-4A0A0A6YW26 117 aa13.28□□□□□ -0.28
Col17a1-202ENSMUST00000086923 KprpB2RUR4 657 aa13.28□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Gm21976J3QNN2 249 aa13.28□□□□□ -0.28
Col17a1-202ENSMUST00000086923 P01660 111 aa13.28□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Gm10803Q3TZS6 135 aa13.28□□□□□ -0.28
Col17a1-202ENSMUST00000086923 D930007J09RikQ9D2K6 131 aa13.28□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Trdv5A0A075B661 115 aa13.27□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Igkv4-62A0A0G2JDW9 117 aa13.27□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Ube2d2bQ6ZWY6 147 aa13.27□□□□□ -0.28
Col17a1-202ENSMUST00000086923 March3Q8BRX9 218 aa13.27□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Klf13Q9JJZ6 289 aa13.27□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Ccl6P27784 116 aa13.27□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Tmem30bQ8BHG3 353 aa13.27□□□□□ -0.28
Col17a1-202ENSMUST00000086923 PpdpfQ9CR37 115 aa13.27□□□□□ -0.28
Col17a1-202ENSMUST00000086923 Gm4792Q569Q2 183 aa13.27□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Ccl12Q62401 104 aa13.27□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Pygo2Q80V76 405 aa13.27□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Il25Q8VHH8 169 aa13.27□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Ros1Q78DX7 2340 aa13.27□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Them7Q9DCP4 223 aa13.27□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Cbln3Q9JHG0 197 aa13.27□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Col11a2Q64739 1736 aa13.27□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Trav14d-1A0A075B6B1 121 aa13.26□□□□□ -0.29
Col17a1-202ENSMUST00000086923 A0A286YE02 88 aa13.26□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Spink1P09036 80 aa13.26□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Gm5105Q8C6Y9 112 aa13.26□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Ramp1Q9WTJ5 148 aa13.26□□□□□ -0.29
Col17a1-202ENSMUST00000086923 NrapQ80XB4 1728 aa13.26□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Frem3Q5H8B9 2123 aa13.26□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Trav9d-1A0A075B699 112 aa13.26□□□□□ -0.29
Col17a1-202ENSMUST00000086923 P01802 115 aa13.26□□□□□ -0.29
Col17a1-202ENSMUST00000086923 P01783 136 aa13.26□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Gata1P17679 413 aa13.26□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Ang5Q5GAN1 145 aa13.26□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Gm9961Q8BNV2 113 aa13.26□□□□□ -0.29
Col17a1-202ENSMUST00000086923 A530064D06RikQ8BNV8 229 aa13.26□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Tmem167aQ9CR64 72 aa13.25□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Csrp1P97315 193 aaKnown RBP13.25□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Lgals4Q8K419 326 aa13.25□□□□□ -0.29
Col17a1-202ENSMUST00000086923 P0C913 63 aa13.25□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Q4KKZ1 196 aa13.25□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Igkv14-100A0A0G2JG36 117 aa13.25□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Wt1P22561 449 aa13.24□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Zfp36l1P23950 338 aa13.24□□□□□ -0.29
Col17a1-202ENSMUST00000086923 TncQ80YX1 2110 aa13.24□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Rnf5O35445 180 aa13.24□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Gm43517E9PYS1 339 aa13.23□□□□□ -0.29
Col17a1-202ENSMUST00000086923 H3BKT1 185 aa13.23□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Trav6d-4Q5R1I0 115 aa13.23□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Ubr3Q5U430 1889 aa13.23□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Foxf1Q61080 378 aa13.23□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Ndufa4Q62425 82 aaKnown RBP13.23□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Ttc6G3UYY4 1857 aa13.23□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Dock7Q8R1A4 2130 aaKnown RBP13.23□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Cxcl10P17515 98 aa13.23□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Rpl32P62911 135 aaKnown RBP13.23□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Gm17455G3UW87 128 aa13.23□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Gm10881P01642 115 aa13.22□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Pou2af1Q64693 256 aa13.22□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Ighv1-7A0A075B5T7 117 aa13.22□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Trav4d-3A0A075B625 110 aa13.22□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Gm13090A2A899 111 aa13.22□□□□□ -0.29
Col17a1-202ENSMUST00000086923 BC107364E9Q5A2 140 aa13.22□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Ly6lH3BJG9 140 aa13.22□□□□□ -0.29
Col17a1-202ENSMUST00000086923 NpyP57774 97 aa13.22□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Akap6E9Q9K8 2307 aa13.22□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Tctex1d4Q8CDY7 219 aa13.22□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Pde6hP61249 83 aa13.22□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Cfc1P97766 202 aa13.22□□□□□ -0.29
Col17a1-202ENSMUST00000086923 LtaP09225 202 aa13.21□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Cd24P24807 76 aa13.21□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Tcl1b4P56844 120 aa13.21□□□□□ -0.29
Col17a1-202ENSMUST00000086923 4930415O20RikQ8CDT5 131 aa13.21□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Gm29666A0A087WQ99 126 aa13.21□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Tnfrsf13bQ9ET35 249 aa13.21□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Atad5Q4QY64 1826 aa13.21□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Nrxn2E9Q7X7 1710 aa13.21□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Gm33815A0A087WNV3 176 aa13.21□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Igkv2-137A0A0B4J1H6 120 aa13.21□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Shisal2aA2A9G7 189 aa13.21□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Fam24aQ8CF27 98 aa13.21□□□□□ -0.29
Col17a1-202ENSMUST00000086923 Exph5Q0VAV2 1960 aa13.2□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Sptbn1Q62261 2363 aaKnown RBP13.2□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Rnf125Q9D9R0 233 aa13.2□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Col4a3Q9QZS0 1669 aa13.2□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Med12lQ8BQM9 2157 aa13.2□□□□□ -0.3
Col17a1-202ENSMUST00000086923 P01726 129 aa13.2□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Ypel4Q65Z93 127 aa13.19□□□□□ -0.3
Col17a1-202ENSMUST00000086923 D730048I06RikQ9CQB8 106 aa13.19□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Smim10l1A0A087WNQ7 89 aa13.19□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Igkv19-93A0A0G2JFZ3 115 aa13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms