RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 A0A1B0GX51 115 aa5.67□□□□□ -1.5
PHGDH-228ENST00000641847 hADV29S1A0JD25 119 aa5.67□□□□□ -1.5
PHGDH-228ENST00000641847 TCL1BO95988 128 aa5.67□□□□□ -1.5
PHGDH-228ENST00000641847 ATXN8Q156A1 80 aa5.67□□□□□ -1.5
PHGDH-228ENST00000641847 TRBV20-1A0A075B6N2 111 aa5.66□□□□□ -1.5
PHGDH-228ENST00000641847 SNCGO76070 127 aa5.66□□□□□ -1.5
PHGDH-228ENST00000641847 SPCS1Q9Y6A9 102 aa5.66□□□□□ -1.5
PHGDH-228ENST00000641847 DNAL4O96015 105 aa5.65□□□□□ -1.5
PHGDH-228ENST00000641847 TRACP01848 142 aa5.65□□□□□ -1.5
PHGDH-228ENST00000641847 SPINK6Q6UWN8 80 aa5.65□□□□□ -1.5
PHGDH-228ENST00000641847 Q6ZQY7 126 aa5.65□□□□□ -1.5
PHGDH-228ENST00000641847 ST20-AS1Q8NBB2 130 aa5.65□□□□□ -1.5
PHGDH-228ENST00000641847 ZNF706Q9Y5V0 76 aaPredicted RBP5.65□□□□□ -1.5
PHGDH-228ENST00000641847 K7EP34 96 aa5.64□□□□□ -1.51
PHGDH-228ENST00000641847 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.64□□□□□ -1.51
PHGDH-228ENST00000641847 SPRR4Q96PI1 79 aa5.63□□□□□ -1.51
PHGDH-228ENST00000641847 GAGE2AQ6NT46 116 aa5.62□□□□□ -1.51
PHGDH-228ENST00000641847 DEFB105AQ8NG35 78 aa5.62□□□□□ -1.51
PHGDH-228ENST00000641847 IGLV5-48A0A075B6I7 105 aa5.61□□□□□ -1.51
PHGDH-228ENST00000641847 A0A1B0GV90 55 aa5.61□□□□□ -1.51
PHGDH-228ENST00000641847 H3BMG7 143 aa5.61□□□□□ -1.51
PHGDH-228ENST00000641847 LINC01547P58512 204 aaPredicted RBP5.61□□□□□ -1.51
PHGDH-228ENST00000641847 KRTAP10-8P60410 259 aa5.61□□□□□ -1.51
PHGDH-228ENST00000641847 LCE2AQ5TA79 106 aaPredicted RBP5.61□□□□□ -1.51
PHGDH-228ENST00000641847 ORMDL1Q9P0S3 153 aa5.61□□□□□ -1.51
PHGDH-228ENST00000641847 TEX49A0A1B0GTD5 131 aa5.6□□□□□ -1.51
PHGDH-228ENST00000641847 C9JAW5 83 aa5.6□□□□□ -1.51
PHGDH-228ENST00000641847 LINC00483Q53H64 154 aa5.6□□□□□ -1.51
PHGDH-228ENST00000641847 OCIAD2Q56VL3 154 aa5.6□□□□□ -1.51
PHGDH-228ENST00000641847 GTF2H5Q6ZYL4 71 aa5.6□□□□□ -1.51
PHGDH-228ENST00000641847 KRTAP1-4P0C5Y4 121 aa5.59□□□□□ -1.51
PHGDH-228ENST00000641847 SPRR1BP22528 89 aa5.59□□□□□ -1.51
PHGDH-228ENST00000641847 Q8N377 158 aa5.59□□□□□ -1.51
PHGDH-228ENST00000641847 MTURNQ8N3F0 131 aa5.59□□□□□ -1.51
PHGDH-228ENST00000641847 ANAPC11Q9NYG5 84 aa5.59□□□□□ -1.51
PHGDH-228ENST00000641847 PPDPFLQ8WWR9 84 aa5.58□□□□□ -1.52
PHGDH-228ENST00000641847 H3BQ85 93 aa5.57□□□□□ -1.52
PHGDH-228ENST00000641847 BAALC-AS2P0C853 105 aa5.57□□□□□ -1.52
PHGDH-228ENST00000641847 SMIM29Q86T20 159 aa5.57□□□□□ -1.52
PHGDH-228ENST00000641847 C3orf22Q8N5N4 141 aa5.57□□□□□ -1.52
PHGDH-228ENST00000641847 FSIP2Q5CZC0 6907 aa5.57□□□□□ -1.52
PHGDH-228ENST00000641847 H3BT86 120 aa5.56□□□□□ -1.52
PHGDH-228ENST00000641847 TMEM256-PLSCR3K7ERE1 68 aa5.56□□□□□ -1.52
PHGDH-228ENST00000641847 FAM229BQ4G0N7 80 aa5.56□□□□□ -1.52
PHGDH-228ENST00000641847 LAMTOR3Q9UHA4 124 aa5.56□□□□□ -1.52
PHGDH-228ENST00000641847 A0A087X002 238 aa5.55□□□□□ -1.52
PHGDH-228ENST00000641847 F8WEM9 126 aa5.55□□□□□ -1.52
PHGDH-228ENST00000641847 PRO0461Q9UI25 63 aa5.55□□□□□ -1.52
PHGDH-228ENST00000641847 IGLV9-49A0A0B4J1Y8 123 aa5.54□□□□□ -1.52
PHGDH-228ENST00000641847 A0A1B0GV72 72 aa5.54□□□□□ -1.52
PHGDH-228ENST00000641847 CRYGAP11844 174 aa5.54□□□□□ -1.52
PHGDH-228ENST00000641847 NDUFV3P56181 108 aaKnown RBP5.54□□□□□ -1.52
PHGDH-228ENST00000641847 UBE2V1Q13404 147 aa5.54□□□□□ -1.52
PHGDH-228ENST00000641847 C9orf153Q5TBE3 101 aa5.54□□□□□ -1.52
PHGDH-228ENST00000641847 ANKRD29Q8N6D5 301 aa5.54□□□□□ -1.52
PHGDH-228ENST00000641847 MOBPQ13875 183 aa5.53□□□□□ -1.52
PHGDH-228ENST00000641847 KRTAP13-2Q52LG2 175 aa5.53□□□□□ -1.52
PHGDH-228ENST00000641847 PRR26Q8N8Z3 221 aa5.53□□□□□ -1.52
PHGDH-228ENST00000641847 Q8NBF4 154 aa5.52□□□□□ -1.53
PHGDH-228ENST00000641847 F8W1H4 67 aa5.5□□□□□ -1.53
PHGDH-228ENST00000641847 PRR4Q16378 134 aa5.5□□□□□ -1.53
PHGDH-228ENST00000641847 TYMSOSQ8TAI1 123 aa5.5□□□□□ -1.53
PHGDH-228ENST00000641847 IGLV8-61A0A075B6I0 122 aa5.49□□□□□ -1.53
PHGDH-228ENST00000641847 JMJD7-PLA2G4BH0Y9G9 81 aa5.48□□□□□ -1.53
PHGDH-228ENST00000641847 RBM3P98179 157 aaKnown RBP5.48□□□□□ -1.53
PHGDH-228ENST00000641847 Q6JHZ5 121 aa5.48□□□□□ -1.53
PHGDH-228ENST00000641847 A0A0G2JQZ4 141 aa5.47□□□□□ -1.53
PHGDH-228ENST00000641847 IGFL1Q6UW32 110 aa5.47□□□□□ -1.53
PHGDH-228ENST00000641847 SSBP3-AS1Q7Z2R9 100 aa5.47□□□□□ -1.53
PHGDH-228ENST00000641847 DSCR8Q96T75 97 aa5.47□□□□□ -1.53
PHGDH-228ENST00000641847 LORP23490 312 aaPredicted RBP5.46□□□□□ -1.54
PHGDH-228ENST00000641847 TEN1Q86WV5 123 aa5.46□□□□□ -1.54
PHGDH-228ENST00000641847 OBSCN-AS1Q96MR7 158 aa5.46□□□□□ -1.54
PHGDH-228ENST00000641847 C14orf132Q9NPU4 83 aa5.46□□□□□ -1.54
PHGDH-228ENST00000641847 TRBV7-4A0A0J9YYF1 115 aa5.45□□□□□ -1.54
PHGDH-228ENST00000641847 ETDBQ3ZM63 59 aa5.45□□□□□ -1.54
PHGDH-228ENST00000641847 LOC110117498A0A087WWA1 95 aa5.44□□□□□ -1.54
PHGDH-228ENST00000641847 HRCT1Q6UXD1 115 aa5.44□□□□□ -1.54
PHGDH-228ENST00000641847 LINC00304Q8N9R0 145 aa5.44□□□□□ -1.54
PHGDH-228ENST00000641847 CRCT1Q9UGL9 99 aa5.44□□□□□ -1.54
PHGDH-228ENST00000641847 VPS25Q9BRG1 176 aa5.43□□□□□ -1.54
PHGDH-228ENST00000641847 A0A1W2PNM2 257 aa5.42□□□□□ -1.54
PHGDH-228ENST00000641847 CCKP06307 115 aa5.42□□□□□ -1.54
PHGDH-228ENST00000641847 PDE6GP18545 87 aa5.42□□□□□ -1.54
PHGDH-228ENST00000641847 Q6ZQT0 140 aa5.42□□□□□ -1.54
PHGDH-228ENST00000641847 CD164Q04900 197 aa5.41□□□□□ -1.54
PHGDH-228ENST00000641847 TRBV7-7A0A0K0K1E9 115 aa5.4□□□□□ -1.54
PHGDH-228ENST00000641847 SPAG11AQ6PDA7 123 aa5.4□□□□□ -1.54
PHGDH-228ENST00000641847 Q6Q795 121 aa5.4□□□□□ -1.54
PHGDH-228ENST00000641847 A0A087WSZ3 146 aa5.38□□□□□ -1.55
PHGDH-228ENST00000641847 SPINK1P00995 79 aa5.38□□□□□ -1.55
PHGDH-228ENST00000641847 RPS29P62273 56 aaKnown RBP5.37□□□□□ -1.55
PHGDH-228ENST00000641847 LIMD2Q9BT23 127 aa5.37□□□□□ -1.55
PHGDH-228ENST00000641847 SS18L2Q9UHA2 77 aa5.35□□□□□ -1.55
PHGDH-228ENST00000641847 A0A1B0GW54 56 aa5.34□□□□□ -1.55
PHGDH-228ENST00000641847 Q5XG85 94 aa5.34□□□□□ -1.55
PHGDH-228ENST00000641847 FAM240AA0A1B0GVK7 77 aa5.31□□□□□ -1.56
PHGDH-228ENST00000641847 ASB16-AS1Q495Z4 193 aa5.31□□□□□ -1.56
PHGDH-228ENST00000641847 RETNLBQ9BQ08 111 aa5.31□□□□□ -1.56
PHGDH-228ENST00000641847 LINC00846Q9NV44 126 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms