RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 Q6ZVQ6 151 aa5.59□□□□□ -1.51
PHGDH-219ENST00000641513 SPACA4Q8TDM5 124 aa5.59□□□□□ -1.51
PHGDH-219ENST00000641513 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.59□□□□□ -1.51
PHGDH-219ENST00000641513 DNAH2Q9P225 4427 aa5.57□□□□□ -1.52
PHGDH-219ENST00000641513 DNAH17Q9UFH2 4485 aa5.57□□□□□ -1.52
PHGDH-219ENST00000641513 IGLV5-48A0A075B6I7 105 aa5.57□□□□□ -1.52
PHGDH-219ENST00000641513 KRTAP4-16G5E9R7 235 aaPredicted RBP5.57□□□□□ -1.52
PHGDH-219ENST00000641513 Q6ZRX8 168 aa5.57□□□□□ -1.52
PHGDH-219ENST00000641513 FAM19A1Q7Z5A9 133 aa5.57□□□□□ -1.52
PHGDH-219ENST00000641513 SS18L2Q9UHA2 77 aa5.57□□□□□ -1.52
PHGDH-219ENST00000641513 LINC01547P58512 204 aaPredicted RBP5.56□□□□□ -1.52
PHGDH-219ENST00000641513 KRTAP10-2P60368 255 aa5.56□□□□□ -1.52
PHGDH-219ENST00000641513 TMEM258P61165 79 aa5.55□□□□□ -1.52
PHGDH-219ENST00000641513 RYR2Q92736 4967 aa5.54□□□□□ -1.52
PHGDH-219ENST00000641513 A0A087WVE0 104 aa5.54□□□□□ -1.52
PHGDH-219ENST00000641513 DEFB105AQ8NG35 78 aa5.54□□□□□ -1.52
PHGDH-219ENST00000641513 TRAV7A0A075B6U4 112 aa5.53□□□□□ -1.52
PHGDH-219ENST00000641513 UBE2AP49459 152 aa5.53□□□□□ -1.52
PHGDH-219ENST00000641513 RPS28P62857 69 aaKnown RBP5.53□□□□□ -1.52
PHGDH-219ENST00000641513 PRLHP81277 87 aa5.53□□□□□ -1.52
PHGDH-219ENST00000641513 KRTAP11-1Q8IUC1 163 aa5.53□□□□□ -1.52
PHGDH-219ENST00000641513 FRAS1Q86XX4 4008 aa5.53□□□□□ -1.52
PHGDH-219ENST00000641513 XP32Q5T750 250 aa5.52□□□□□ -1.53
PHGDH-219ENST00000641513 LINC00336Q6ZUF6 198 aa5.52□□□□□ -1.53
PHGDH-219ENST00000641513 Q8N377 158 aa5.52□□□□□ -1.53
PHGDH-219ENST00000641513 Q9BRP9 147 aa5.52□□□□□ -1.53
PHGDH-219ENST00000641513 HIGD2AQ9BW72 106 aa5.52□□□□□ -1.53
PHGDH-219ENST00000641513 PLAC8Q9NZF1 115 aa5.52□□□□□ -1.53
PHGDH-219ENST00000641513 ERC2-IT1O76042 136 aa5.51□□□□□ -1.53
PHGDH-219ENST00000641513 KRTAP10-1P60331 282 aa5.5□□□□□ -1.53
PHGDH-219ENST00000641513 HAMPP81172 84 aa5.5□□□□□ -1.53
PHGDH-219ENST00000641513 ST20-AS1Q8NBB2 130 aa5.5□□□□□ -1.53
PHGDH-219ENST00000641513 EPM2AB3EWF7 344 aa5.49□□□□□ -1.53
PHGDH-219ENST00000641513 SPRR4Q96PI1 79 aa5.49□□□□□ -1.53
PHGDH-219ENST00000641513 FAM30AQ9NZY2 134 aa5.49□□□□□ -1.53
PHGDH-219ENST00000641513 SACSQ9NZJ4 4579 aa5.48□□□□□ -1.53
PHGDH-219ENST00000641513 H0Y9J4 135 aa5.48□□□□□ -1.53
PHGDH-219ENST00000641513 J3KT08 172 aa5.48□□□□□ -1.53
PHGDH-219ENST00000641513 KLKP1Q107X0 134 aa5.48□□□□□ -1.53
PHGDH-219ENST00000641513 C1orf137Q5JT78 98 aa5.48□□□□□ -1.53
PHGDH-219ENST00000641513 Q8NBF4 154 aa5.48□□□□□ -1.53
PHGDH-219ENST00000641513 HECTD4Q9Y4D8 3996 aa5.48□□□□□ -1.53
PHGDH-219ENST00000641513 HERC2O95714 4834 aa5.48□□□□□ -1.53
PHGDH-219ENST00000641513 IGLV8-61A0A075B6I0 122 aa5.47□□□□□ -1.53
PHGDH-219ENST00000641513 NDUFC1O43677 76 aa5.47□□□□□ -1.53
PHGDH-219ENST00000641513 NREPQ16612 68 aa5.47□□□□□ -1.53
PHGDH-219ENST00000641513 CIRBP-AS1Q8TBR5 109 aa5.47□□□□□ -1.53
PHGDH-219ENST00000641513 PSORS1C2Q9UIG4 136 aa5.47□□□□□ -1.53
PHGDH-219ENST00000641513 SCXQ7RTU7 201 aa5.46□□□□□ -1.54
PHGDH-219ENST00000641513 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
PHGDH-219ENST00000641513 BPY2O14599 106 aa5.45□□□□□ -1.54
PHGDH-219ENST00000641513 IGKV4-1P06312 121 aa5.45□□□□□ -1.54
PHGDH-219ENST00000641513 DNAH11Q96DT5 4516 aa5.45□□□□□ -1.54
PHGDH-219ENST00000641513 PKD1P98161 4303 aa5.44□□□□□ -1.54
PHGDH-219ENST00000641513 A0A1W2PNM2 257 aa5.44□□□□□ -1.54
PHGDH-219ENST00000641513 F8WEM9 126 aa5.44□□□□□ -1.54
PHGDH-219ENST00000641513 SPRR1BP22528 89 aa5.44□□□□□ -1.54
PHGDH-219ENST00000641513 ATP5EP56381 51 aaPredicted RBP5.44□□□□□ -1.54
PHGDH-219ENST00000641513 Q6ZSA8 131 aa5.44□□□□□ -1.54
PHGDH-219ENST00000641513 FAT2Q9NYQ8 4349 aa5.43□□□□□ -1.54
PHGDH-219ENST00000641513 DNAH5Q8TE73 4624 aa5.43□□□□□ -1.54
PHGDH-219ENST00000641513 SMIM29Q86T20 159 aa5.42□□□□□ -1.54
PHGDH-219ENST00000641513 KRTAP13-1Q8IUC0 172 aa5.42□□□□□ -1.54
PHGDH-219ENST00000641513 CYSTM1Q9H1C7 97 aa5.42□□□□□ -1.54
PHGDH-219ENST00000641513 DNAH8Q96JB1 4490 aa5.42□□□□□ -1.54
PHGDH-219ENST00000641513 A0A1B0GVY2 172 aa5.41□□□□□ -1.54
PHGDH-219ENST00000641513 ZNF861PO60384 105 aa5.41□□□□□ -1.54
PHGDH-219ENST00000641513 IGLV7-43P04211 117 aa5.41□□□□□ -1.54
PHGDH-219ENST00000641513 C20orf197Q8N268 126 aa5.41□□□□□ -1.54
PHGDH-219ENST00000641513 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
PHGDH-219ENST00000641513 H7BZZ5 65 aa5.4□□□□□ -1.54
PHGDH-219ENST00000641513 OCR1Q9BZK8 76 aa5.4□□□□□ -1.54
PHGDH-219ENST00000641513 ZNF706Q9Y5V0 76 aaPredicted RBP5.4□□□□□ -1.54
PHGDH-219ENST00000641513 FAM236DA0A1B0GTK5 79 aa5.39□□□□□ -1.55
PHGDH-219ENST00000641513 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.39□□□□□ -1.55
PHGDH-219ENST00000641513 FAM236CP0DP71 79 aa5.39□□□□□ -1.55
PHGDH-219ENST00000641513 KRTAP9-2Q9BYQ4 174 aa5.37□□□□□ -1.55
PHGDH-219ENST00000641513 IGLV9-49A0A0B4J1Y8 123 aa5.36□□□□□ -1.55
PHGDH-219ENST00000641513 RPL37AP61513 92 aaKnown RBP5.36□□□□□ -1.55
PHGDH-219ENST00000641513 IGFL1Q6UW32 110 aa5.36□□□□□ -1.55
PHGDH-219ENST00000641513 TMEM254Q8TBM7 123 aa5.36□□□□□ -1.55
PHGDH-219ENST00000641513 SERP1Q9Y6X1 66 aa5.36□□□□□ -1.55
PHGDH-219ENST00000641513 UBR4Q5T4S7 5183 aa5.36□□□□□ -1.55
PHGDH-219ENST00000641513 A0A0U1RQV1 116 aa5.35□□□□□ -1.55
PHGDH-219ENST00000641513 KRTAP9-6A0A140TA67 174 aa5.35□□□□□ -1.55
PHGDH-219ENST00000641513 A0A0G2JQZ4 141 aa5.34□□□□□ -1.55
PHGDH-219ENST00000641513 SMR3BP02814 79 aaPredicted RBP5.34□□□□□ -1.55
PHGDH-219ENST00000641513 DSCR10P59022 87 aa5.34□□□□□ -1.55
PHGDH-219ENST00000641513 ANAPC11Q9NYG5 84 aa5.34□□□□□ -1.55
PHGDH-219ENST00000641513 LINC00483Q53H64 154 aa5.33□□□□□ -1.56
PHGDH-219ENST00000641513 MOBPQ13875 183 aa5.32□□□□□ -1.56
PHGDH-219ENST00000641513 Q8N9L7 120 aa5.32□□□□□ -1.56
PHGDH-219ENST00000641513 HCG22E2RYF7 251 aa5.31□□□□□ -1.56
PHGDH-219ENST00000641513 C5orf47Q569G3 176 aa5.3□□□□□ -1.56
PHGDH-219ENST00000641513 SRRM2Q9UQ35 2752 aaKnown RBP5.29□□□□□ -1.56
PHGDH-219ENST00000641513 K7EQZ3 153 aa5.29□□□□□ -1.56
PHGDH-219ENST00000641513 HRCT1Q6UXD1 115 aa5.29□□□□□ -1.56
PHGDH-219ENST00000641513 ZCCHC13Q8WW36 166 aaKnown RBP5.29□□□□□ -1.56
PHGDH-219ENST00000641513 SNURFQ9Y675 71 aa5.29□□□□□ -1.56
PHGDH-219ENST00000641513 PKHD1P08F94 4074 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms