RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 H3BPC8 53 aa9.21□□□□□ -0.93
SCARB2-208ENST00000638372 FAM229AH3BQW9 127 aa9.21□□□□□ -0.94
SCARB2-208ENST00000638372 USP34Q70CQ2 3546 aa9.21□□□□□ -0.94
SCARB2-208ENST00000638372 PRR15Q8IV56 129 aa9.21□□□□□ -0.94
SCARB2-208ENST00000638372 PSORS1C2Q9UIG4 136 aa9.2□□□□□ -0.94
SCARB2-208ENST00000638372 CNBPP62633 177 aaKnown RBP9.2□□□□□ -0.94
SCARB2-208ENST00000638372 ACYP2P14621 99 aa9.2□□□□□ -0.94
SCARB2-208ENST00000638372 MRPL34Q9BQ48 92 aaKnown RBP9.2□□□□□ -0.94
SCARB2-208ENST00000638372 Q96NJ1 140 aa9.19□□□□□ -0.94
SCARB2-208ENST00000638372 NIPBLQ6KC79 2804 aaeCLIP9.19□□□□□ -0.94
SCARB2-208ENST00000638372 NF1P21359 2839 aa9.18□□□□□ -0.94
SCARB2-208ENST00000638372 WIPF1O43516 503 aa9.18□□□□□ -0.94
SCARB2-208ENST00000638372 APCP25054 2843 aa9.18□□□□□ -0.94
SCARB2-208ENST00000638372 SMR3BP02814 79 aaPredicted RBP9.18□□□□□ -0.94
SCARB2-208ENST00000638372 KMT2BQ9UMN6 2715 aaPredicted RBP9.18□□□□□ -0.94
SCARB2-208ENST00000638372 DCHS2Q6V1P9 2916 aa9.18□□□□□ -0.94
SCARB2-208ENST00000638372 OBSCN-AS1Q96MR7 158 aa9.17□□□□□ -0.94
SCARB2-208ENST00000638372 A0A1B0GU69 56 aa9.16□□□□□ -0.94
SCARB2-208ENST00000638372 Q8NDZ9 215 aa9.16□□□□□ -0.94
SCARB2-208ENST00000638372 KLKP1Q107X0 134 aa9.15□□□□□ -0.94
SCARB2-208ENST00000638372 C8orf17Q9NRJ1 99 aa9.15□□□□□ -0.94
SCARB2-208ENST00000638372 CRYBG3Q68DQ2 2970 aa9.15□□□□□ -0.94
SCARB2-208ENST00000638372 DSCR10P59022 87 aa9.14□□□□□ -0.95
SCARB2-208ENST00000638372 SSBP3-AS1Q7Z2R9 100 aa9.13□□□□□ -0.95
SCARB2-208ENST00000638372 IGLV5-48A0A075B6I7 105 aa9.13□□□□□ -0.95
SCARB2-208ENST00000638372 SPRR4Q96PI1 79 aa9.12□□□□□ -0.95
SCARB2-208ENST00000638372 PRO0628Q9UI54 55 aa9.12□□□□□ -0.95
SCARB2-208ENST00000638372 LOC101927531A0A1B0GV80 90 aa9.11□□□□□ -0.95
SCARB2-208ENST00000638372 IGLV7-43P04211 117 aa9.11□□□□□ -0.95
SCARB2-208ENST00000638372 A0A1B0GVX0 72 aa9.11□□□□□ -0.95
SCARB2-208ENST00000638372 H7BZZ5 65 aa9.11□□□□□ -0.95
SCARB2-208ENST00000638372 IGLV8-61A0A075B6I0 122 aa9.11□□□□□ -0.95
SCARB2-208ENST00000638372 C8orf87E5RJ46 101 aa9.1□□□□□ -0.95
SCARB2-208ENST00000638372 IGLV5-37A0A075B6J1 123 aa9.1□□□□□ -0.95
SCARB2-208ENST00000638372 FBN2P35556 2912 aa9.1□□□□□ -0.95
SCARB2-208ENST00000638372 LINC01600Q96MT4 127 aa9.09□□□□□ -0.95
SCARB2-208ENST00000638372 TENM4Q6N022 2769 aa9.08□□□□□ -0.96
SCARB2-208ENST00000638372 TNP2Q05952 138 aa9.08□□□□□ -0.96
SCARB2-208ENST00000638372 FLG2Q5D862 2391 aaPredicted RBP9.08□□□□□ -0.96
SCARB2-208ENST00000638372 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.07□□□□□ -0.96
SCARB2-208ENST00000638372 A8MUN3 132 aa9.06□□□□□ -0.96
SCARB2-208ENST00000638372 COA5Q86WW8 74 aa9.06□□□□□ -0.96
SCARB2-208ENST00000638372 LINC00304Q8N9R0 145 aa9.05□□□□□ -0.96
SCARB2-208ENST00000638372 C9orf92A6NGG3 77 aa9.02□□□□□ -0.97
SCARB2-208ENST00000638372 ATP11AUNQ6ZP68 121 aa9.01□□□□□ -0.97
SCARB2-208ENST00000638372 HRNRQ86YZ3 2850 aaPredicted RBP9□□□□□ -0.97
SCARB2-208ENST00000638372 DMBT1Q9UGM3 2413 aaPredicted RBP8.98□□□□□ -0.97
SCARB2-208ENST00000638372 KRTAP1-5Q9BYS1 174 aa8.98□□□□□ -0.97
SCARB2-208ENST00000638372 OCR1Q9BZK8 76 aa8.95□□□□□ -0.98
SCARB2-208ENST00000638372 DCHS1Q96JQ0 3298 aa8.94□□□□□ -0.98
SCARB2-208ENST00000638372 WDFY3Q8IZQ1 3526 aa8.93□□□□□ -0.98
SCARB2-208ENST00000638372 SPRR1AP35321 89 aa8.93□□□□□ -0.98
SCARB2-208ENST00000638372 KRTAP26-1Q6PEX3 210 aa8.93□□□□□ -0.98
SCARB2-208ENST00000638372 RELNP78509 3460 aa8.9□□□□□ -0.98
SCARB2-208ENST00000638372 LINC00336Q6ZUF6 198 aa8.9□□□□□ -0.99
SCARB2-208ENST00000638372 J3QL48 77 aa8.87□□□□□ -0.99
SCARB2-208ENST00000638372 MUC3AQ02505 3323 aa8.84□□□□□ -0.99
SCARB2-208ENST00000638372 CYP4F30PQ9H0H9 118 aa8.84□□□□□ -0.99
SCARB2-208ENST00000638372 MXRA5Q9NR99 2828 aa8.84□□□□□ -0.99
SCARB2-208ENST00000638372 Q8N1X5 172 aa8.83□□□□□ -1
SCARB2-208ENST00000638372 PRR26Q8N8Z3 221 aa8.83□□□□□ -1
SCARB2-208ENST00000638372 UQCR11O14957 56 aa8.83□□□□□ -1
SCARB2-208ENST00000638372 CYSTM1Q9H1C7 97 aa8.82□□□□□ -1
SCARB2-208ENST00000638372 PLAC8Q9NZF1 115 aa8.81□□□□□ -1
SCARB2-208ENST00000638372 ASPMQ8IZT6 3477 aa8.81□□□□□ -1
SCARB2-208ENST00000638372 SPANXA2-OT1Q8N9U9 137 aa8.8□□□□□ -1
SCARB2-208ENST00000638372 LAMA5O15230 3695 aa8.78□□□□□ -1
SCARB2-208ENST00000638372 CD164Q04900 197 aa8.76□□□□□ -1.01
SCARB2-208ENST00000638372 MMP24-AS1A0A0U1RRL7 71 aa8.75□□□□□ -1.01
SCARB2-208ENST00000638372 SPRR1BP22528 89 aa8.74□□□□□ -1.01
SCARB2-208ENST00000638372 MIR22HGQ0VDD5 57 aa8.74□□□□□ -1.01
SCARB2-208ENST00000638372 PANO1I0J062 215 aa8.73□□□□□ -1.01
SCARB2-208ENST00000638372 LINC00472Q9H8W2 130 aa8.73□□□□□ -1.01
SCARB2-208ENST00000638372 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
SCARB2-208ENST00000638372 TENM3Q9P273 2699 aa8.71□□□□□ -1.01
SCARB2-208ENST00000638372 Q8N9P0 234 aaPredicted RBP8.69□□□□□ -1.02
SCARB2-208ENST00000638372 KRTAP10-2P60368 255 aa8.68□□□□□ -1.02
SCARB2-208ENST00000638372 FAM229BQ4G0N7 80 aa8.68□□□□□ -1.02
SCARB2-208ENST00000638372 HRES1P13985 223 aa8.68□□□□□ -1.02
SCARB2-208ENST00000638372 KRTAP4-16G5E9R7 235 aaPredicted RBP8.68□□□□□ -1.02
SCARB2-208ENST00000638372 IGLV7-46A0A075B6I9 117 aa8.67□□□□□ -1.02
SCARB2-208ENST00000638372 KRTAP10-1P60331 282 aa8.65□□□□□ -1.03
SCARB2-208ENST00000638372 ZFHX4Q86UP3 3567 aa8.64□□□□□ -1.03
SCARB2-208ENST00000638372 CELSR1Q9NYQ6 3014 aa8.64□□□□□ -1.03
SCARB2-208ENST00000638372 Q1T7F1 81 aa8.59□□□□□ -1.03
SCARB2-208ENST00000638372 A0A0D9SG42 100 aa8.59□□□□□ -1.03
SCARB2-208ENST00000638372 PKD1L1Q8TDX9 2849 aa8.59□□□□□ -1.03
SCARB2-208ENST00000638372 RBM12B-AS1Q9P1G2 102 aa8.58□□□□□ -1.04
SCARB2-208ENST00000638372 TENM1Q9UKZ4 2725 aa8.58□□□□□ -1.04
SCARB2-208ENST00000638372 FP248Q71RG6 208 aaPredicted RBP8.58□□□□□ -1.04
SCARB2-208ENST00000638372 DMDP11532 3685 aa8.57□□□□□ -1.04
SCARB2-208ENST00000638372 LINC01554Q52M75 96 aa8.57□□□□□ -1.04
SCARB2-208ENST00000638372 Q6ZR54 194 aa8.56□□□□□ -1.04
SCARB2-208ENST00000638372 KRTAP11-1Q8IUC1 163 aa8.56□□□□□ -1.04
SCARB2-208ENST00000638372 Q5W150 140 aa8.55□□□□□ -1.04
SCARB2-208ENST00000638372 CDC42SE1Q9NRR8 79 aa8.55□□□□□ -1.04
SCARB2-208ENST00000638372 ZCCHC13Q8WW36 166 aaKnown RBP8.54□□□□□ -1.04
SCARB2-208ENST00000638372 Q5XG85 94 aa8.53□□□□□ -1.04
SCARB2-208ENST00000638372 Q6ZSA8 131 aa8.52□□□□□ -1.05
SCARB2-208ENST00000638372 KRTAP7-1Q8IUC3 87 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms