RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 EFCAB6Q5THR3 1501 aa0.46□□□□□ -2.34
HMHB1-202ENST00000638299 TNXBP22105 4242 aa0.46□□□□□ -2.34
HMHB1-202ENST00000638299 FCGBPQ9Y6R7 5405 aaPredicted RBP0.45□□□□□ -2.34
HMHB1-202ENST00000638299 U3KQA8 63 aa0.45□□□□□ -2.34
HMHB1-202ENST00000638299 CSPG4Q6UVK1 2322 aa0.45□□□□□ -2.34
HMHB1-202ENST00000638299 WNK2Q9Y3S1 2297 aa0.45□□□□□ -2.34
HMHB1-202ENST00000638299 ABCC8Q09428 1581 aa0.45□□□□□ -2.34
HMHB1-202ENST00000638299 PRM1P04553 51 aa0.44□□□□□ -2.34
HMHB1-202ENST00000638299 RPS27P42677 84 aaKnown RBP0.44□□□□□ -2.34
HMHB1-202ENST00000638299 SERF2P84101 59 aa0.44□□□□□ -2.34
HMHB1-202ENST00000638299 RPS27LQ71UM5 84 aaKnown RBP0.44□□□□□ -2.34
HMHB1-202ENST00000638299 PIEZO1Q92508 2521 aa0.44□□□□□ -2.34
HMHB1-202ENST00000638299 IQGAP1P46940 1657 aa0.43□□□□□ -2.34
HMHB1-202ENST00000638299 SNRPGP15A8MWD9 76 aa0.43□□□□□ -2.34
HMHB1-202ENST00000638299 C6orf48Q9UBA6 75 aa0.43□□□□□ -2.34
HMHB1-202ENST00000638299 LYSTQ99698 3801 aa0.42□□□□□ -2.34
HMHB1-202ENST00000638299 TENM4Q6N022 2769 aa0.42□□□□□ -2.34
HMHB1-202ENST00000638299 DDX60Q8IY21 1712 aaKnown RBP0.42□□□□□ -2.34
HMHB1-202ENST00000638299 LMO7Q8WWI1 1683 aa0.42□□□□□ -2.34
HMHB1-202ENST00000638299 CELSR1Q9NYQ6 3014 aa0.42□□□□□ -2.34
HMHB1-202ENST00000638299 PDE4DIPQ5VU43 2346 aa0.42□□□□□ -2.34
HMHB1-202ENST00000638299 LINC00308Q8TCZ7 52 aa0.41□□□□□ -2.34
HMHB1-202ENST00000638299 OTOGQ6ZRI0 2925 aa0.41□□□□□ -2.34
HMHB1-202ENST00000638299 IGF2RP11717 2491 aa0.41□□□□□ -2.34
HMHB1-202ENST00000638299 LRP1Q07954 4544 aaKnown RBP0.4□□□□□ -2.34
HMHB1-202ENST00000638299 CHD6Q8TD26 2715 aa0.4□□□□□ -2.35
HMHB1-202ENST00000638299 KMT2AQ03164 3969 aa0.4□□□□□ -2.35
HMHB1-202ENST00000638299 M0R2T5 61 aa0.4□□□□□ -2.35
HMHB1-202ENST00000638299 PLNP26678 52 aa0.4□□□□□ -2.35
HMHB1-202ENST00000638299 DEFB135Q30KP9 77 aa0.4□□□□□ -2.35
HMHB1-202ENST00000638299 KRTAP21-1Q3LI58 79 aa0.39□□□□□ -2.35
HMHB1-202ENST00000638299 CMC2Q9NRP2 79 aa0.39□□□□□ -2.35
HMHB1-202ENST00000638299 TIMM8BQ9Y5J9 83 aaPredicted RBP0.39□□□□□ -2.35
HMHB1-202ENST00000638299 S4R3F8 94 aa0.39□□□□□ -2.35
HMHB1-202ENST00000638299 HUWE1Q7Z6Z7 4374 aaKnown RBP0.39□□□□□ -2.35
HMHB1-202ENST00000638299 WT1-ASQ06250 92 aa0.38□□□□□ -2.35
HMHB1-202ENST00000638299 DEFB106AQ8N104 65 aa0.38□□□□□ -2.35
HMHB1-202ENST00000638299 TMEM167BQ9NRX6 74 aa0.38□□□□□ -2.35
HMHB1-202ENST00000638299 ABCA2Q9BZC7 2435 aa0.38□□□□□ -2.35
HMHB1-202ENST00000638299 ATRQ13535 2644 aa0.37□□□□□ -2.35
HMHB1-202ENST00000638299 H0YGX0 51 aa0.37□□□□□ -2.35
HMHB1-202ENST00000638299 DSPP15924 2871 aaKnown RBP0.36□□□□□ -2.35
HMHB1-202ENST00000638299 MUC16Q8WXI7 14507 aa0.36□□□□□ -2.35
HMHB1-202ENST00000638299 TFF3Q07654 80 aa0.36□□□□□ -2.35
HMHB1-202ENST00000638299 TRANK1O15050 2925 aa0.36□□□□□ -2.35
HMHB1-202ENST00000638299 PCNX1Q96RV3 2341 aa0.36□□□□□ -2.35
HMHB1-202ENST00000638299 IQGAP2Q13576 1575 aa0.36□□□□□ -2.35
HMHB1-202ENST00000638299 NFAT5O94916 1531 aa0.35□□□□□ -2.35
HMHB1-202ENST00000638299 SPTA1P02549 2419 aa0.35□□□□□ -2.35
HMHB1-202ENST00000638299 FAM208AQ9UK61 1670 aaKnown RBP0.34□□□□□ -2.35
HMHB1-202ENST00000638299 SMIM27A0A1W2PRY6 76 aa0.34□□□□□ -2.36
HMHB1-202ENST00000638299 PRLHP81277 87 aa0.34□□□□□ -2.36
HMHB1-202ENST00000638299 ZFYVE26Q68DK2 2539 aa0.34□□□□□ -2.36
HMHB1-202ENST00000638299 VPS13BQ7Z7G8 4022 aa0.34□□□□□ -2.36
HMHB1-202ENST00000638299 PKD1L1Q8TDX9 2849 aa0.33□□□□□ -2.36
HMHB1-202ENST00000638299 MYCBP2O75592 4640 aa0.33□□□□□ -2.36
HMHB1-202ENST00000638299 LINC01546A6NGU7 62 aa0.33□□□□□ -2.36
HMHB1-202ENST00000638299 H0YGG7 62 aa0.33□□□□□ -2.36
HMHB1-202ENST00000638299 ABRACLQ9P1F3 81 aa0.33□□□□□ -2.36
HMHB1-202ENST00000638299 KIF21BO75037 1637 aa0.33□□□□□ -2.36
HMHB1-202ENST00000638299 UNC79Q9P2D8 2635 aa0.32□□□□□ -2.36
HMHB1-202ENST00000638299 KRTAP5-10Q6L8G5 202 aa0.32□□□□□ -2.36
HMHB1-202ENST00000638299 TOMM5Q8N4H5 51 aa0.32□□□□□ -2.36
HMHB1-202ENST00000638299 SYNE1Q8NF91 8797 aaKnown RBP0.32□□□□□ -2.36
HMHB1-202ENST00000638299 TOP2AP11388 1531 aaKnown RBP0.32□□□□□ -2.36
HMHB1-202ENST00000638299 UBR5O95071 2799 aaPredicted RBP0.32□□□□□ -2.36
HMHB1-202ENST00000638299 EP300Q09472 2414 aaPredicted RBP0.32□□□□□ -2.36
HMHB1-202ENST00000638299 TNRC18O15417 2968 aaPredicted RBP0.31□□□□□ -2.36
HMHB1-202ENST00000638299 LPAP08519 4548 aa0.31□□□□□ -2.36
HMHB1-202ENST00000638299 KAAG1Q9UBP8 84 aa0.31□□□□□ -2.36
HMHB1-202ENST00000638299 PRRC2CQ9Y520 2896 aaKnown RBP0.31□□□□□ -2.36
HMHB1-202ENST00000638299 AKAP13Q12802 2813 aa0.3□□□□□ -2.36
HMHB1-202ENST00000638299 SPRR2DP22532 72 aa0.3□□□□□ -2.36
HMHB1-202ENST00000638299 WFDC10BQ8IUB3 73 aa0.3□□□□□ -2.36
HMHB1-202ENST00000638299 FAT4Q6V0I7 4981 aa0.3□□□□□ -2.36
HMHB1-202ENST00000638299 CHD8Q9HCK8 2581 aa0.3□□□□□ -2.36
HMHB1-202ENST00000638299 NAV2Q8IVL1 2488 aa0.29□□□□□ -2.36
HMHB1-202ENST00000638299 USP24Q9UPU5 2620 aa0.29□□□□□ -2.36
HMHB1-202ENST00000638299 NBASA2RRP1 2371 aa0.29□□□□□ -2.36
HMHB1-202ENST00000638299 HMCN2Q8NDA2 5059 aa0.28□□□□□ -2.36
HMHB1-202ENST00000638299 HRNRQ86YZ3 2850 aaPredicted RBP0.28□□□□□ -2.36
HMHB1-202ENST00000638299 PHGR1C9JFL3 82 aa0.28□□□□□ -2.36
HMHB1-202ENST00000638299 WNK1Q9H4A3 2382 aa0.28□□□□□ -2.36
HMHB1-202ENST00000638299 NCOR2Q9Y618 2525 aa0.28□□□□□ -2.36
HMHB1-202ENST00000638299 H3BUA1 57 aa0.27□□□□□ -2.37
HMHB1-202ENST00000638299 PKD1P98161 4303 aa0.27□□□□□ -2.37
HMHB1-202ENST00000638299 ACANP16112 2415 aa0.26□□□□□ -2.37
HMHB1-202ENST00000638299 SMIM2Q9BVW6 85 aa0.26□□□□□ -2.37
HMHB1-202ENST00000638299 HIVEP3Q5T1R4 2406 aa0.26□□□□□ -2.37
HMHB1-202ENST00000638299 TENM3Q9P273 2699 aa0.26□□□□□ -2.37
HMHB1-202ENST00000638299 HECTD4Q9Y4D8 3996 aa0.26□□□□□ -2.37
HMHB1-202ENST00000638299 APC2O95996 2303 aa0.25□□□□□ -2.37
HMHB1-202ENST00000638299 IGLV5-48A0A075B6I7 105 aa0.25□□□□□ -2.37
HMHB1-202ENST00000638299 CLTCL1P53675 1640 aa0.24□□□□□ -2.37
HMHB1-202ENST00000638299 MAP1BP46821 2468 aaKnown RBP0.24□□□□□ -2.37
HMHB1-202ENST00000638299 PTPN13Q12923 2485 aa0.24□□□□□ -2.37
HMHB1-202ENST00000638299 H3BNG1 76 aa0.24□□□□□ -2.37
HMHB1-202ENST00000638299 HSPG2P98160 4391 aa0.24□□□□□ -2.37
HMHB1-202ENST00000638299 CEP290O15078 2479 aa0.24□□□□□ -2.37
HMHB1-202ENST00000638299 SACSQ9NZJ4 4579 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms