RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 RPS28P62857 69 aaKnown RBP13.38□□□□□ -0.27
CLN6-224ENST00000638076 IGKV4-1P06312 121 aa13.37□□□□□ -0.27
CLN6-224ENST00000638076 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.37□□□□□ -0.27
CLN6-224ENST00000638076 A0A0G2JQZ4 141 aa13.36□□□□□ -0.27
CLN6-224ENST00000638076 UBE2AP49459 152 aa13.36□□□□□ -0.27
CLN6-224ENST00000638076 KMT2AQ03164 3969 aa13.36□□□□□ -0.27
CLN6-224ENST00000638076 IGFL1Q6UW32 110 aa13.35□□□□□ -0.27
CLN6-224ENST00000638076 Q6ZR54 194 aa13.35□□□□□ -0.27
CLN6-224ENST00000638076 SPACA4Q8TDM5 124 aa13.35□□□□□ -0.27
CLN6-224ENST00000638076 TRAV7A0A075B6U4 112 aa13.34□□□□□ -0.27
CLN6-224ENST00000638076 IGLV8-61A0A075B6I0 122 aa13.32□□□□□ -0.28
CLN6-224ENST00000638076 TMEM258P61165 79 aa13.32□□□□□ -0.28
CLN6-224ENST00000638076 DNAH2Q9P225 4427 aa13.31□□□□□ -0.28
CLN6-224ENST00000638076 RTL8CO15255 209 aa13.3□□□□□ -0.28
CLN6-224ENST00000638076 HECTD4Q9Y4D8 3996 aa13.29□□□□□ -0.28
CLN6-224ENST00000638076 C5orf47Q569G3 176 aa13.29□□□□□ -0.28
CLN6-224ENST00000638076 SPRR1BP22528 89 aa13.28□□□□□ -0.28
CLN6-224ENST00000638076 C20orf197Q8N268 126 aa13.28□□□□□ -0.28
CLN6-224ENST00000638076 SRRM2Q9UQ35 2752 aaKnown RBP13.28□□□□□ -0.28
CLN6-224ENST00000638076 KRTAP13-1Q8IUC0 172 aa13.27□□□□□ -0.29
CLN6-224ENST00000638076 C1orf134Q5TEV5 83 aa13.23□□□□□ -0.29
CLN6-224ENST00000638076 DNAH17Q9UFH2 4485 aa13.22□□□□□ -0.29
CLN6-224ENST00000638076 DSCR10P59022 87 aa13.22□□□□□ -0.29
CLN6-224ENST00000638076 A0A087WSZ3 146 aa13.21□□□□□ -0.29
CLN6-224ENST00000638076 LY6G6CO95867 125 aa13.21□□□□□ -0.29
CLN6-224ENST00000638076 IGLV5-52A0A0A0MRZ9 124 aa13.18□□□□□ -0.3
CLN6-224ENST00000638076 K7EQZ3 153 aa13.17□□□□□ -0.3
CLN6-224ENST00000638076 FBN3Q75N90 2809 aa13.16□□□□□ -0.3
CLN6-224ENST00000638076 DEFB116Q30KQ4 102 aa13.15□□□□□ -0.3
CLN6-224ENST00000638076 TGP01266 2768 aa13.14□□□□□ -0.31
CLN6-224ENST00000638076 PLAC8Q9NZF1 115 aa13.14□□□□□ -0.31
CLN6-224ENST00000638076 KLKP1Q107X0 134 aa13.14□□□□□ -0.31
CLN6-224ENST00000638076 OCR1Q9BZK8 76 aa13.14□□□□□ -0.31
CLN6-224ENST00000638076 SNURFQ9Y675 71 aa13.14□□□□□ -0.31
CLN6-224ENST00000638076 PSORS1C2Q9UIG4 136 aa13.13□□□□□ -0.31
CLN6-224ENST00000638076 OXTP01178 125 aa13.12□□□□□ -0.31
CLN6-224ENST00000638076 DNAH8Q96JB1 4490 aa13.1□□□□□ -0.31
CLN6-224ENST00000638076 H7BZZ5 65 aa13.08□□□□□ -0.31
CLN6-224ENST00000638076 FRAS1Q86XX4 4008 aa13.07□□□□□ -0.32
CLN6-224ENST00000638076 IGLV9-49A0A0B4J1Y8 123 aa13.06□□□□□ -0.32
CLN6-224ENST00000638076 TMEM254Q8TBM7 123 aa13.06□□□□□ -0.32
CLN6-224ENST00000638076 FAM30AQ9NZY2 134 aa13.05□□□□□ -0.32
CLN6-224ENST00000638076 DNAH6Q9C0G6 4158 aa13.05□□□□□ -0.32
CLN6-224ENST00000638076 LINC00483Q53H64 154 aa13.05□□□□□ -0.32
CLN6-224ENST00000638076 WWC2-AS2Q96NR7 200 aa13.04□□□□□ -0.32
CLN6-224ENST00000638076 HCG22E2RYF7 251 aa13.04□□□□□ -0.32
CLN6-224ENST00000638076 RPL37AP61513 92 aaKnown RBP13.04□□□□□ -0.32
CLN6-224ENST00000638076 Q5XG85 94 aa13.04□□□□□ -0.32
CLN6-224ENST00000638076 ZNF861PO60384 105 aa13.02□□□□□ -0.32
CLN6-224ENST00000638076 ZNF706Q9Y5V0 76 aaPredicted RBP13.02□□□□□ -0.32
CLN6-224ENST00000638076 LINC00472Q9H8W2 130 aa13□□□□□ -0.33
CLN6-224ENST00000638076 C4orf26Q17RF5 130 aa12.99□□□□□ -0.33
CLN6-224ENST00000638076 FAM236DA0A1B0GTK5 79 aa12.98□□□□□ -0.33
CLN6-224ENST00000638076 FAM236CP0DP71 79 aa12.98□□□□□ -0.33
CLN6-224ENST00000638076 KRTAP10-2P60368 255 aa12.98□□□□□ -0.33
CLN6-224ENST00000638076 KRTAP21-3Q3LHN1 58 aa12.97□□□□□ -0.33
CLN6-224ENST00000638076 A0A0U1RQV1 116 aa12.96□□□□□ -0.33
CLN6-224ENST00000638076 NDUFC1O43677 76 aa12.96□□□□□ -0.33
CLN6-224ENST00000638076 ANAPC11Q9NYG5 84 aa12.96□□□□□ -0.34
CLN6-224ENST00000638076 DNAH5Q8TE73 4624 aa12.96□□□□□ -0.34
CLN6-224ENST00000638076 WFDC13Q8IUB5 93 aa12.95□□□□□ -0.34
CLN6-224ENST00000638076 DNAH11Q96DT5 4516 aa12.94□□□□□ -0.34
CLN6-224ENST00000638076 HRCT1Q6UXD1 115 aa12.94□□□□□ -0.34
CLN6-224ENST00000638076 ALMS1Q8TCU4 4167 aa12.93□□□□□ -0.34
CLN6-224ENST00000638076 A8MWP4 228 aa12.93□□□□□ -0.34
CLN6-224ENST00000638076 MOBPQ13875 183 aa12.93□□□□□ -0.34
CLN6-224ENST00000638076 PRR15Q8IV56 129 aa12.93□□□□□ -0.34
CLN6-224ENST00000638076 IGLV7-43P04211 117 aa12.91□□□□□ -0.34
CLN6-224ENST00000638076 HYDINQ4G0P3 5121 aa12.91□□□□□ -0.34
CLN6-224ENST00000638076 LCE6AA0A183 80 aa12.9□□□□□ -0.34
CLN6-224ENST00000638076 CIRBP-AS1Q8TBR5 109 aa12.9□□□□□ -0.34
CLN6-224ENST00000638076 SERP1Q9Y6X1 66 aa12.9□□□□□ -0.34
CLN6-224ENST00000638076 KRTAP29-1A8MX34 341 aaPredicted RBP12.87□□□□□ -0.35
CLN6-224ENST00000638076 Q96NJ1 140 aa12.86□□□□□ -0.35
CLN6-224ENST00000638076 CASC2Q6XLA1 102 aa12.85□□□□□ -0.35
CLN6-224ENST00000638076 PKD1P98161 4303 aa12.81□□□□□ -0.36
CLN6-224ENST00000638076 FAT2Q9NYQ8 4349 aa12.81□□□□□ -0.36
CLN6-224ENST00000638076 KRTAP10-1P60331 282 aa12.8□□□□□ -0.36
CLN6-224ENST00000638076 NDUFB1O75438 58 aa12.8□□□□□ -0.36
CLN6-224ENST00000638076 Q6ZSA8 131 aa12.79□□□□□ -0.36
CLN6-224ENST00000638076 ATP5EP56381 51 aaPredicted RBP12.78□□□□□ -0.36
CLN6-224ENST00000638076 ZCCHC13Q8WW36 166 aaKnown RBP12.77□□□□□ -0.36
CLN6-224ENST00000638076 MMP24-AS1A0A0U1RRL7 71 aa12.77□□□□□ -0.37
CLN6-224ENST00000638076 SMIM26A0A096LP01 95 aa12.73□□□□□ -0.37
CLN6-224ENST00000638076 hDV103S1A0JD37 113 aa12.71□□□□□ -0.37
CLN6-224ENST00000638076 LRP1BQ9NZR2 4599 aa12.71□□□□□ -0.38
CLN6-224ENST00000638076 MP68P56378 58 aa12.71□□□□□ -0.38
CLN6-224ENST00000638076 PRO0628Q9UI54 55 aa12.7□□□□□ -0.38
CLN6-224ENST00000638076 FP248Q71RG6 208 aaPredicted RBP12.68□□□□□ -0.38
CLN6-224ENST00000638076 LINC00336Q6ZUF6 198 aa12.68□□□□□ -0.38
CLN6-224ENST00000638076 IGHV6-1A0A0B4J1U7 121 aa12.66□□□□□ -0.38
CLN6-224ENST00000638076 C8orf17Q9NRJ1 99 aa12.66□□□□□ -0.38
CLN6-224ENST00000638076 A0A1B0GVX0 72 aa12.66□□□□□ -0.38
CLN6-224ENST00000638076 CDK2AP2O75956 126 aa12.66□□□□□ -0.38
CLN6-224ENST00000638076 H0Y9P7 68 aa12.65□□□□□ -0.38
CLN6-224ENST00000638076 SSBP3-AS1Q7Z2R9 100 aa12.65□□□□□ -0.38
CLN6-224ENST00000638076 LINC00208Q96KT6 92 aa12.65□□□□□ -0.38
CLN6-224ENST00000638076 ASB16-AS1Q495Z4 193 aa12.64□□□□□ -0.39
CLN6-224ENST00000638076 CD164Q04900 197 aa12.63□□□□□ -0.39
CLN6-224ENST00000638076 A0A087X002 238 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms